SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05583  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006583
Annotation
cytosolic_juvenile_hormone_binding_protein_36_kDa_subunit_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.383
 

Sequence

CDS
ATGGTTAGCGGTCGTGCTCTTCATTTCGTATTTAAAGTCGCAGATAGGACTTTAACAGCAAAATTTTATAGGGAAATCCTCGGAATGAAGGTTCTCCGCCATGAAGAGTTTAGTGAAGGATGCGAGGCAGCTTGCAATGGACCTTATGCAAACCGATGGAGCAAAACCATGGTTGGATATGGCCCTGAAGATACACATTTTGTTGTTGAACTGACCTACAACTATGGTGTAACGCATTACGAACAAGGAAATGATTTCCTTGGCATCACAGTACAGTCAAGTGAGAGTCTGAAGAGGGCGCAGACTAACAACTGGCCAATTAAAGAACATAATGGTCTGAAGTATGTTGAGGCTCCTGGTGGTTACAAATTCTATATTGTAGACAAGCCCCAACCAGTTGATAAAGATCCCGTTGTCAAAGTTTCATTGGCGAGTTCAAACTTAGCAAAATCAATAGCCTATTGGAACGGTCTACTGACTTTGAAACTCTATGAAAAAACTGACAAAACTGCATTACTAGGCTATAGTGATGATCAAGCTAAATTGGAACTTGTTGATATTGGTGAACCAATAAACCGCGCAAAGGCATACGGGCGCATAGCATTCTCGTGTCCATTCGACGAGCAGCCGGTCATAGACAAGAAGATCCAAGACGCAAACGAGACTATCCTCACTCCCCTCATATCGTTGGATACGCCCGGCAAGGCTACCGTGAGGGTCATCATCTTAGCTGACCCCGACGGTCATGAGATATGCTTCGTTGACGATGAGAGCTTCAGACAACTGTCACAAGTAGACCCCTCCAGCGACGCCGAACTCGATAAGTTCATAAAATCAGACAAGTCCAGAGCATAA
Protein
MVSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYGPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGLKYVEAPGGYKFYIVDKPQPVDKDPVVKVSLASSNLAKSIAYWNGLLTLKLYEKTDKTALLGYSDDQAKLELVDIGEPINRAKAYGRIAFSCPFDEQPVIDKKIQDANETILTPLISLDTPGKATVRVIILADPDGHEICFVDDESFRQLSQVDPSSDAELDKFIKSDKSRA

Summary

EMBL
BABH01008650    AF098303    AAF19266.1    KX778610    AON96633.1    GAIX01004209    + More
JAA88351.1    NWSH01000874    PCG73769.1    ODYU01000764    SOQ36049.1    AGBW02009164    OWR51489.1    KF830718    AHK12750.1    KQ461198    KPJ06205.1    KQ459606    KPI91614.1    KY924792    ASA46446.1    JTDY01004282    KOB68343.1    KK852530    KDR21937.1    NEVH01012085    PNF30900.1    LJIG01009060    KRT83835.1    LBMM01008975    KMQ88493.1    KZ288282    PBC29554.1    GL446286    EFN88105.1    KK107131    EZA58190.1    KQ971372    EFA09464.1    ADTU01010074    KQ435726    KOX78254.1    GECU01021653    GECU01018920    GECU01016731    GECU01007266    GECU01003489    JAS86053.1    JAS88786.1    JAS90975.1    JAT00441.1    JAT04218.1    GECU01028381    JAS79325.1    NNAY01000601    OXU27449.1    DS235860    EEB19142.1    KQ434825    KZC07377.1    AAZX01000600    KQ976455    KYM85165.1    GALX01003778    JAB64688.1    KQ414584    KOC70598.1    GEDC01010643    JAS26655.1    JF728808    AEJ38210.1    KQ981305    KYN42989.1    AK401981    BAM18603.1    GEZM01005780    JAV95922.1    GDRN01048379    JAI66660.1    KK119489    KFM75831.1    GGMS01001420    MBY70623.1    GDAI01000095    JAI17508.1    GG666578    EEN52737.1    IAAA01011893    LAA06082.1    GL732585    EFX74120.1    CH477189    EAT48747.1    KB201304    ESO97731.1    JU174676    GBEX01001398    AFJ50202.1    JAI13162.1    GAAZ01000993    GBKC01001480    GBKD01000888    JAA96950.1    JAG44590.1    JAG46730.1    BC073122    CM004468    AAH73122.1    OCT95058.1    UFQT01000382    SSX23792.1    AJWK01011621    GDAY02000969    JAV50458.1    EU924276    ACH41922.1    ABLF02036520    ABLF02036522    AK341099    BAH71570.1    GDIQ01188176    JAK63549.1    GL441524    EFN64684.1    GANO01002421    JAB57450.1    UFQS01000452    UFQT01000452    SSX04162.1    SSX24527.1    QRBI01000111    RMC10664.1    MUZQ01000126    OWK57328.1    GBXI01008325    GBXI01001298    JAD05967.1    JAD12994.1    DS469519    EDO47433.1    GL888529    EGI59687.1    GBXI01001133    JAD13159.1    SSX23793.1    GBHO01023441    GBHO01023440    GBRD01011855    GDHC01009266    JAG20163.1    JAG20164.1    JAG53969.1    JAQ09363.1    BC064201    AAH64201.1    GDHC01002837    JAQ15792.1    GDIP01247106    JAI76295.1    GAMC01003487    GAMC01003486    JAC03070.1    GDIP01116562    JAL87152.1    GAKP01001539    JAC57413.1    GDHF01032042    GDHF01028479    GDHF01022835    JAI20272.1    JAI23835.1    JAI29479.1    JH818713    EKC18008.1    AAMC01032360    AAMC01032361    PZQS01000004    PVD32776.1    GFDG01002576    JAV16223.1    BC081480    AAH81480.1    AL954372    BC153574    AAI53575.1    KB631294    ERL84219.1    APGK01043263    APGK01043264    KB741014    ENN75391.1    KA646981    AFP61610.1    OUUW01000011    SPP86705.1    AGTP01051052    BT127474    AEE62436.1    FR905258    CDQ77744.1    JARO02000432    KPP78577.1    JP010523    AER99120.1    GU588430    ADO28386.1   
Pfam
PF00903   Glyoxalase        + More
PF18029   Glyoxalase_6
Interpro
IPR037523   VOC        + More
IPR029068   Glyas_Bleomycin-R_OHBP_Dase       
IPR004360   Glyas_Fos-R_dOase_dom       
IPR041581   Glyoxalase_6       
SUPFAM
SSF54593   SSF54593       
Gene 3D
PDB
3ZI1     E-value=9.96265e-90,     Score=840

Ontologies

Topology

Length:
284
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00164
Exp number, first 60 AAs:
0.0002
Total prob of N-in:
0.01735
outside
1  -  284
 
 

Population Genetic Test Statistics

Pi
231.602165
Theta
156.887463
Tajima's D
1.434787
CLR
0.212271
CSRT
0.768561571921404
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
25044914 VIIGVDR 95.24 2e-09
28556443 AQTNNWPIK 100.00 1e-07
28556443 TGYTLDVTTGQR 100.00 1e-07
26822097 DIADFIAQEFK 100.00 7e-06
25044914 IAFIQGER 100.00 7e-06
28467696 IAFSCPFDEQPVIDK 100.00 7e-06
26822097 IEIVDIGEPINR 100.00 3e-05
28467696 IAFQVFVPDGAGR 100.00 3e-05
28556443 YVEAPGGYK 100.00 3e-05
28556443 LELVDIGEPINR 100.00 0.003
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