Gene

KWMTBOMO05580

Pre Gene Modal

BGIBMGA006585

Annotation

PREDICTED:_uncharacterized_protein_LOC106127240_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr10(-):5329014-5334009      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.621

CDS

ATGCCTTGGAATTCTAAAGGAAGAAAACATAAGAAGAAAGGAATGTCTCCGGAAACGTATAATTCAAAATATCCTTATGATTACATGAACAATATACGGGACGTTGCCAACGAAAACATTTCCTCCTGCGCCGAAAATTCTAGTGTTTGCAGTACAGATCAAGAGGGTTTCCAAAAGGCAGAGGCGTTTCCTTTCAAACATACGCCAAGCGGTTATCTTAAGGTCCAGTCGAATCAAGTTGTATTCCAATCGTCAACAGTAGGAGTTCTACTCGCAGATCCAACGCAAGCCAAAGTTAAAGTTAAATTTGAAGGAAAAGCCGCCGGTGAACCAGATGATGACACGTCAGAAAATTTTGAAAATGATAATGAACCCGAACCCCTATTACGATTTGGTAATAGAGAAAATATACAAGTAAGAAACGCAGATGTTAAAACTAGAGTGAGAAATAGCAAATCGGTTAGTAGTAAGGATGAAAAAGGAAAAGACTTGGCTAGCCTCGGCTACACTACATCGGAACCAATAGATTGGATGCGGGTTCAGTTACCAAAAAAACAAGACCTATTCCAAGAGTTCTATCGAAGAGTCCACAACTTCATAAATACCGACGCTGTGGTGCGTATCGATAATAATGAATTGCGATGTCATCAAATAGTTTTGCAAGTTTATTCTTCGTTCTTCGATGCTAATGTCAATAAAGAAATCGATTTACCATCGTCCAAAGTAACACCGGAAGCTTTCCGTTCAATCTACGAATGGATGGTTTATAATGGCTGCGAAAGTAATAAGGTTCTTAAAAGGGAAAACATATTGGACATTTTCTGTGCTGCACAATATCTGTCAATTAAAGATTTAGAAGACCAATGCCGGGCGTTTATATTAAACGAGAATTTATTCTGTGAGGATACAGCATTCGCTTTGTTCAGGGAAGCAAAACTAAAAGGGATGACGCCCGTTGTGGATATAATGGATTTTCATTTTGATGCTTCAAGCGAAATGGAAGTCCTTATGGCTGGAGTGCGTTGGTTACACGGCGATTGGTCTTCGCGTCGTCATTACGCTATTGAAATAATGCGCTGTGTCCGTTTTGGTTTGATCTCGCCGTGGCAGCTAGTTGACATCAAGCGTAACCCTGACAATTCGGAAATCTTGGAGATTGTCAACGAGCCTGAAGTACAGCAGATGGTTGACGACGGACTTGCGTTAGTTGCCGTTGTAAAAGTAGTTTGGAACAAATAG

Protein

MPWNSKGRKHKKKGMSPETYNSKYPYDYMNNIRDVANENISSCAENSSVCSTDQEGFQKAEAFPFKHTPSGYLKVQSNQVVFQSSTVGVLLADPTQAKVKVKFEGKAAGEPDDDTSENFENDNEPEPLLRFGNRENIQVRNADVKTRVRNSKSVSSKDEKGKDLASLGYTTSEPIDWMRVQLPKKQDLFQEFYRRVHNFINTDAVVRIDNNELRCHQIVLQVYSSFFDANVNKEIDLPSSKVTPEAFRSIYEWMVYNGCESNKVLKRENILDIFCAAQYLSIKDLEDQCRAFILNENLFCEDTAFALFREAKLKGMTPVVDIMDFHFDASSEMEVLMAGVRWLHGDWSSRRHYAIEIMRCVRFGLISPWQLVDIKRNPDNSEILEIVNEPEVQQMVDDGLALVAVVKVVWNK

Uniprot

A0A2H1VUZ0   A0A2A4K267   A0A194QLG1   A0A1C9EGK4   A0A212F1A7   A0A194PEC4   + More
K7IPM2   A0A0C9PVV7   E2BM20   A0A158NVQ3   A0A151I279   A0A0M8ZW88   A0A151WV26   A0A195FXS2   A0A151JAN6   A0A154PKK6   A0A088AQ25   A0A310ST73   A0A151IAR7   E2ARA8   A0A1B6FMZ1   U4UXM2   A0A1B6L4X4   N6TQ24   A0A1Y1MUP4   D6X201   A0A1B6HZU3   A0A1B6KKA4   A0A1S3DF83   A0A1B6ELB0   A0A2R7WG18   A0A0A1X1A3   A0A1W4V2W1   A0A1W4V1P9   A0A3B0J1W4   A0A1D2NCI5   A0A0M4ED52   B3ME27   A0A0R1DTB0  

Pubmed

26354079    22118469    20075255    20798317    21347285    23537049    + More
28004739    18362917    19820115    25830018    27289101    17994087    17550304   

EMBL

ODYU01004309    SOQ44044.1    NWSH01000287    PCG77732.1    KQ461198    KPJ06209.1    + More
KX778610    AON96630.1    AGBW02010922    OWR47519.1    KQ459606    KPI91617.1    GBYB01005613    JAG75380.1    GL449100    EFN83269.1    ADTU01027375    ADTU01027376    KQ976554    KYM80815.1    KQ435840    KOX71326.1    KQ982709    KYQ51782.1    KQ981193    KYN45107.1    KQ979254    KYN22097.1    KQ434936    KZC12004.1    KQ760221    OAD61375.1    KQ978169    KYM96591.1    GL442010    EFN64025.1    GECZ01018245    JAS51524.1    KB632406    ERL95101.1    GEBQ01021296    JAT18681.1    APGK01056275    APGK01056276    APGK01056277    APGK01056278    KB741274    ENN71355.1    GEZM01023688    JAV88230.1    KQ971371    EFA10195.2    GECU01027561    JAS80145.1    GEBQ01028098    JAT11879.1    GECZ01031078    JAS38691.1    KK854775    PTY18604.1    GBXI01009435    JAD04857.1    OUUW01000001    SPP75294.1    LJIJ01000091    ODN02973.1    CP012524    ALC41790.1    CH902619    EDV37572.1    CM000157    KRJ98384.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000002358    UP000008237    + More
UP000005205    UP000078540    UP000053105    UP000075809    UP000078541    UP000078492    UP000076502    UP000005203    UP000078542    UP000000311    UP000030742    UP000019118    UP000007266    UP000079169    UP000192221    UP000268350    UP000094527    UP000092553    UP000007801    UP000002282   

Pfam

PF00651   BTB        + More
PF07707   BACK
PF01344   Kelch_1
PF00612   IQ
PF15881   DUF4734
PF07773   DUF1619

Interpro

IPR011705   BACK        + More
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       
IPR006652   Kelch_1       
IPR015915   Kelch-typ_b-propeller       
IPR000048   IQ_motif_EF-hand-BS       
IPR012337   RNaseH-like_sf       
IPR002156   RNaseH_domain       
IPR036397   RNaseH_sf       
IPR031750   DUF4734       
IPR040354   Tectonic       
IPR011677   DUF1619       

SUPFAM

SSF54695   SSF54695        + More
SSF117281   SSF117281       
SSF53098   SSF53098       

Gene 3D

2.120.10.80     3.30.420.10    

ProteinModelPortal

A0A2H1VUZ0   A0A2A4K267   A0A194QLG1   A0A1C9EGK4   A0A212F1A7   A0A194PEC4   + More
K7IPM2   A0A0C9PVV7   E2BM20   A0A158NVQ3   A0A151I279   A0A0M8ZW88   A0A151WV26   A0A195FXS2   A0A151JAN6   A0A154PKK6   A0A088AQ25   A0A310ST73   A0A151IAR7   E2ARA8   A0A1B6FMZ1   U4UXM2   A0A1B6L4X4   N6TQ24   A0A1Y1MUP4   D6X201   A0A1B6HZU3   A0A1B6KKA4   A0A1S3DF83   A0A1B6ELB0   A0A2R7WG18   A0A0A1X1A3   A0A1W4V2W1   A0A1W4V1P9   A0A3B0J1W4   A0A1D2NCI5   A0A0M4ED52   B3ME27   A0A0R1DTB0  

PDB

4CP3     E-value=0.0022805,     Score=97

KEGG

105841269    no KO assigned | (RefSeq) uncharacterized LOC105841269

GO

GO:0016021   GO:0004523   GO:0003676   GO:0005515   GO:0042254   GO:0003677   GO:0003899   GO:0006913   GO:0007165   GO:0001664   GO:0005525   GO:0007264   GO:0003824  

PANTHER

PTHR14611  

Length:

412

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00318

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02188

outside

1  -  412

 

 

Pi

273.664084

Theta

185.558113

Tajima's D

0.657902

CLR

0.904271

CSRT

0.569671516424179

Interpretation

Uncertain