SGID The Silkworm Genome Information Database
Gene
KWMTBOMO05576
Annotation
VMP30.1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.199
 

Sequence

CDS
ATGAATTATTTAACTTGTCCGCTGGTTTTATTGACGATTTTGTCGGTGCAATGCGTACCGTTCTTGAAAGATAATGCTTTGAGTGACACTCTTGTCTTAGAGGACGATAAGGAACCTAAGCATCGTGTCAAGAAGTCATTTGTGGTCGAGCCAAAGAAAGAAGAGGAGAATTTATTATTAGAAGAAGAAACAAGCAATGTGGGAGATGAAGAGAATGTTTCTGGATTAATGGCTGCACGCGAAGGCAAAAATCTGGAACACTTTACGCCTGAGACGTACTCAAATATGGGAATTCCGAAGAAAGTACTACCGTTTATTTGGTACAGACAATGGCAGCCATATGAAGAAAACCTTCCCGCTGGAAATTTAATATATCCACACTTGCATCCAGCATTTATGGTATTACAGTCTATGAATTCACTGCCACCAGTTTACACACCCCAATATACAAAAGATTTATCGTTGCGAAGGTCTTCAAGGTCGGAAGTCGATGATTTTTTGGAACAGCTGAATCACGATACTATCATGAATAACATCCTGCCAACTATGCCGTTTCCGTTTCTTCGTACCTCTAATCATGGCGAGTCCCCACAAGAAGACCTTGTAACGGCTATATTTCCTGGAGTAGAAAATACTGCAAGTGCTATACCAATACTTTTGAGCTGTTCGCCTAAGGTTCACCAAGGCACCCTTCAAAATTATCAGATCAACAATCACGAAAGTCACGACTCTGGTACTTCGCATAACGACGCAGTACTGATAACTGACAGCAAGCCAGCGGAGCCTTCATCATCAAAATAA
Protein
MNYLTCPLVLLTILSVQCVPFLKDNALSDTLVLEDDKEPKHRVKKSFVVEPKKEEENLLLEEETSNVGDEENVSGLMAAREGKNLEHFTPETYSNMGIPKKVLPFIWYRQWQPYEENLPAGNLIYPHLHPAFMVLQSMNSLPPVYTPQYTKDLSLRRSSRSEVDDFLEQLNHDTIMNNILPTMPFPFLRTSNHGESPQEDLVTAIFPGVENTASAIPILLSCSPKVHQGTLQNYQINNHESHDSGTSHNDAVLITDSKPAEPSSSK

Summary

ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.980706
 
 
Length:
266
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.13653
Exp number, first 60 AAs:
0.13248
Total prob of N-in:
0.01904
outside
1  -  266
 
 

Population Genetic Test Statistics

Pi
53.078117
Theta
70.143041
Tajima's D
-0.627923
CLR
2.346475
CSRT
0.213089345532723
Interpretation
Uncertain
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