Silkworm Genome Informatics Database

Gene

KWMTBOMO05570

Annotation

PREDICTED:_restin_homolog_isoform_X6_[Bombyx_mori]

Location

Bomo_Chr10(-):5262712-5263471 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.55

CDS

ATGAGTGAAGCTGGTGCGTCCGATTCTGGAGTACCACCTCCAGAACCCGTATCAGGAGCATCATCCGACAGTGCACATACAATCAGCACGACATCACATAAGGCAGATACAACCAGGCCACTCGGACTCCCAAAGCCTTCAGGCTTGAAGCCACCTACAAAAATTGGACGTCTGTGCTCAAACTCAGCACCAAAACCTGCTGTTCCCATATCTCCAAGAAGTGGTGAGTGA

Protein

MSEAGASDSGVPPPEPVSGASSDSAHTISTTSHKADTTRPLGLPKPSGLKPPTKIGRLCSNSAPKPAVPISPRSGE

Uniprot

A0A194PFZ6 A0A194QL09 A0A1C9EGK8 A0A2A4K1H0 A0A2A4K112 A0A2A4K0I1 + More
A0A2H1VJ08 S4PHX2 A0A212EN66

Pubmed

26354079 23622113 22118469

EMBL

KQ459606 KPI91624.1 KQ461198 KPJ06217.1 KX778610 AON96622.1 + More
NWSH01000287 PCG77744.1 PCG77749.1 PCG77747.1 ODYU01002558 SOQ40234.1 GAIX01000339 JAA92221.1 AGBW02013697 OWR42945.1

Proteomes

UP000053268 UP000053240 UP000218220 UP000007151

Pfam

PF16641 CLIP1_ZNF + More
PF01302 CAP_GLY

Interpro

IPR032108   CLIP1_ZNF        + More
IPR036859   CAP-Gly_dom_sf
IPR000938   CAP-Gly_domain

SUPFAM

SSF74924 SSF74924

Gene 3D

2.30.30.190

ProteinModelPortal

A0A194PFZ6 A0A194QL09 A0A1C9EGK8 A0A2A4K1H0 A0A2A4K112 A0A2A4K0I1 + More
A0A2H1VJ08 S4PHX2 A0A212EN66

KEGG

101739189 K10421 CAP-Gly domain-containing linker protein 1 | (RefSeq) restin homolog

PATHWAY

04150 mTOR signaling pathway - Bombyx mori (domestic silkworm)

GO

Length:

76

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.15244

outside

1 - 76

Pi

313.436292

Theta

240.121332

Tajima's D

1.106133

CLR

0

CSRT

0.686065696715164

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics