Gene

KWMTBOMO05568  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006589

Annotation

PREDICTED:_restin_homolog_isoform_X9_[Bombyx_mori]

Location

Bomo_Chr10(-):5209063-5239461      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.449

CDS

ATGCCCGTCGAAACCAAAATTAGCTTTTCCGACGGCAGCTCGACGGACACGCTGAGGAAGCTTAGTGACGACCTATCTAGAAAACACCTATCAGACCACAGCGTGATATTGACAGAGGACACCGATAGCTTCATTATTGGTGAACGTGTTTGGGTAGGCGGTACGAAACCTGGACAAATTGCTTATATCGGAGAAACGCAGTTTGCTCCCGGAGAGTGGGCTGGGATAGTACTCGACGAGCCAATTGGTAAAAACGATGGATCAGTGGCAGGCGTTCGTTATTTTCAATGTCCAGAGAAACGAGGTGTGTTTTCTCGATTGACTCGACTCACTAGAGTTCCCTTCGCTATACACACACCGCACGATGCATCGCCCGTGTCGGATGCGGGGAGCGTGTTCGAACGACCTCCTTCCGGCGCGGCTCGTCCCAAGCGGACCCTCTCGCCAAATGGAAGTATTCGCAGTATTGTCAGCAGTAAGATGAATGCTTCAATTTCCACAACGACCAATGGAGATATTCGAACGGGTGATCGTGTTATTGTATCAAGCAGCCGCGGAAGCAAAGCTGGTATTTTGCGTTTCGTAGGTCCTACAGATTTCGCGCCGGGCATTTGGGCAGGTGTCGAACTTGATGATCCCCTCGGTAAAAACGATGGCTCTGTAGACGGAAAGAGATATTTCGACTGTGCACCACGTTTTGGTTTATTCGCTCCGATATCCAAAGTATCGAGATCTCCATCCAACCGCAAGCCGGGTGCTTGTGCTATCCACAGCAACGGACGAGCGACTCCGTTACGACGTTCCAACTCGCGCGATTCGCTCACGTCTCTTGGCACCTCTATTGCATCGTCTCGTGTGGGGGTGAGACTCGGGGTGACGTCGCTGGGCGCTCAGCGCGTCGGCGGCCCGCGTGCTTCGTCCACCCCGGTCTCGGCTAAGAACGCCCTCCAGGAATTACTTAGGGAGAAACAGCAGCATCTCGAACGAATGATGCGCGAACGTGAATTGGAAAGGACCGAAGTAGCCAAAATCTCGCTTCAGGCCGACAGAGCGGAAACCGCGCTCACGCAACTGAAGAAGGAAGCCTCACAGACGAGCAATGAGAACGTCATACTCAAAGCCGAATTGGACAAGCTCAACAAGCTTCTGGAGGACGAGAGGCAAAAGGTCGAAGATCTCATGTTCAGGAACGAAGAGGAGAACATCAACAAAGAAGATTATTATAGATACAAAGAGGCTATGGAGAAAGAGATAGCTGCTAATGAGCAACGCATCAGAGAGCTTGAAGCCGAAGCAGCGCTGCAGCTGGCCCGCGCCGACGCTACGGCGACAGCGCTGCGGGCGCTTGAAGAACAACGGAACGCTGAAGCCGCTACTGTGGCTGAACAACACAGAGAAGAACTGTCCGCCGCTCAGACACTTTCATCCGAACTACAAAAGCTTTTAGACGAAGCGTACGCATTGTTAAAAGAAAAAGAAAACGAGAAGGACTCGTTAGGCAAAAGCATGTCCGATGAATTGGCAAAGTTGAAAGCAGACTCAGAAAGGGCTCTGAACGAAGCCAAAACGAAACTAGCTATTGTACAAACAGAGTTCGAGACACAATTATCGGTACTTACGGCCAAACTACAATTGGCTGAATCGAAATTAGAAACAGAAAAACAAACTCTCGAAAGAACGAACAAAGAGAACAGTCAAACGATAATCGATTTGAACACGAAACTGACGCAGCTACAAGCGGCCGTCGATGACAAAACCATCGAACTTAATAAAGTAATTGCAGTGACTAAAGAACACGAAGTAAACCTAAACAAAGAAATTACGAAACTGAAAATGGAGCTGAGCGCTAGAGTAATCGATTTGGAACAGCTAGAAGATACTAAGAGGAAACAGGAATTGGCATGTAAAAATTTGGAAGAGGAAATCGCACGCGTCCGGGATGAATGCAGTATTAAAGTTAATGAATATGAAGGCATCTTAAATGAAGTCACGCAGCAAAATGAGAAGAACAAAACAGAAATATCGGAACTACAGCAAAGTTTGTCTGTGAAAATTAAAGAGTACGAGAAACTTCTGGCAGACTCCAGTACAAGTTCAAGTTCGACAGAAAAACTAATAAACGAATATAAAGGAACTATTCATGAAAGAGATAAAGAGATAATCAAGCTCAAAGATGATTATGAACAAACTACAGCCAACTTTAATATCAAACACAGCAAAATCGCAGAAGAACACAAAAAAGAAATCGACGAACGGAATTCTAGAATCGAAGAACTTATCAAAGAAATAAATAGTCACAAACAAACGCTCGATCAAAACAAAGTCGATTTTGACGCATTAAACTCCCAGTTCATGCAAAACGCGAATGAGTTGAAAACGCTCAGAGAGGAAAACGATAAACTTAAAGCTACAATTAATGAATTGACTGCCGCGAACGTCGAACTTAAAGCTAAACTTTCAACCATGGAACTAGAGGTCGGCGAATTGAAGCGTCAACTTGACAGTTCATTAGAAAAATGTGAAGATTTAGAAAAAATGAAGGAAAAAGTAGAATCCGAATATATGAACTTGACTGGGCAAACGTCCGATTCTAATGATCAATTCAATAAACTATCGCAACACCTTAAAGAAACAGAAAGCGAATTACGCGAGTTTAAAGATAAGCACAGGGAAGTAGTTAATAATTACGCACGTACAGAACAAGAATTAAAACAAAAGCTGTTTAAACTACAGGAAGATTTTTCACTAGAACGCGGTCAGTTAGTTCAGTCGGTCAATGACAATATCGAAAAGATTGTTGAAACTGAAAGTAAAATTAAAGAATTCGAGTCACAGTTATTTGATATCAATAATCGTTTAAAAGACGCACTTACAGCGAACGATAGCTTAACTGATGAGAATGTTATACTGAAAAAAGAAATAGAAACACTAAAGCTAAAAGAGAAGGAATTACTTGAAGAACATGAAAACATACGAAAGAAATTAGAAGTTGAAAATGATAGATTTAAAGAAGAAGTATCTATGCTAAAAGCCGAAGGCGCTACATCAGAAGTTAAATTAATGGAAAAAGTTGATCAATTGACTGAAGCTCAAAATGACTTGAACAATAAACTGGAGGAAGCCAGAAAACACGAAGACTCGCTACAAAAAGTACTAGATGATATGACAACACAATTGAATAACCAGAAAACGCGTTACGAAAAAGAAATATCAGTACTTCAAAGTCATCTCTCCACCTTAACCAATGATTTTAGTAAAAATCAAGCCGACGAAAATGTGTTAAAACAACAACTTGAAGAGAAGCAAAACCTTATTAAAGATCTAACCTTGAAATCGGAGATGCTTGAAGTAGATTTAAAATCTAATGTAGAAATGATAAAGGAAAAAGATAGGCAGATAGCACAAACCAACGAGGAAATAATTAAAGCTAACGAAAACAGGAAACAGTTAGAAGATACTTTAAATAGTGCTCAGTTAGATATCTCTTCGTTAAAACAAAAGTATGAAAACCTTATAGCTAATTCTTCTGCGGAAGAATCGCTCATTAAGGATCAACTAGAACAACTAGAAGAGATGAAAAAAGAAATGACTCTTATCGTTCAAGATAAAGAAATGTTACAATCTAAGTACAACCAAGCAATCGAGGAGCTTAAAATAGTTAAAGAAGCGCACGAAGTTGCTGTTAAAAGCTTGAAGGAAACCACGGATATGAAAGACGGTCTGCAGAGGGCATTAGATGAAAAAGATAGTTTATTAAAATCTCAAACTGAGGTTAGTAAGACTGAATTAGCCAAATTAAAAGAAGTAGGTGAAGAAGTTGCCAAATTAAAATTAGATGTTGCGAATAAAGATGCGGCTCTGCAAGAAAAAGAAACGCAACTTACAAGCGTTGCTGATGCACTTAAGTCAGGATCAAACGAAATGCAAAAATCGTTAGATGAGATTCAAACGAAATATGACAGTTTAAATGAAAAATATAAAACTGAAGTTGAATCTCTAAATAATAATTTGAAATCATTACAAAATCAAGTTAGTGAAAGACAAAAAGAAATCGAAGAACTGAGGGAATTCAAAGAAAAAGTAACGGAGTTACAGGAACTATTAAATAAGGCTGAACAAGATATAAAACAACTAACCAATATCAACGAAGCACAAAAATTGAATTATGACGATCTTAATAAACAGCTTCAGGCTCAATTCGACGAATACAAAAAAGATAGCAAAAGACTCAAACATGAACTAAAGGCCAAACTTAATGAATACGAAAAAGAATTGGGCCAGTACAAAGAAAAAGTAAAATCGGAATCGGATAAACAAAATGAAACTGTGCAAAAATTAATTGAAGCTGAAAAAAACGTAAAGGAACTAAACCAAAAGTTTGAACTAGTACACGATCAGCAGAGTTCAGATGCAGAAAAAGATGTCAAACTAGAAAAGTTATCTGTTGAATTACATGTCACAAAACAATCACTGGCTAATCATATAGCGAACAATGAAGCGGTTGTTAATAAGTTAAAAGCAGATATTGAACACAAACTTAAGGATTTAAAACAAAAAGAAGATTTAATATCGAGATTGCAAGATGAAGTTAAGAATCAAAGAGCTAAAGTAGAAATAGCAGAAAGAGAAAAGGTTCTATTGCAAAAAGAAATCGCTAAAGGCAACGATCTGAAAGACAAAAATGATAATAATGCAGTGGGCATACTTGGGCAAGGAGATACCATAGCAACTCAGAAATCACAAGAGGATAAAGAAGTTATCGACGGTAAAGTCAGCTTTTTGAACTCAGTCATAGTGGATATGCAACGAAAGAACGAACAACTTATGGCACGAGTACAGGTCCTCGAAGGCTCCGCGGGATCCATAGATCCACCATTATTTAACGGTCGTAAAGTGAAAGCAGTGGCGCCGCGTCTTTTCTGCGATATTTGTGACGAGTTCGACGCACACGACACCGAGGACTGTCCCCGGCAAGCTGCCGACATCGACGCGCCGGCGACGCCCGCCAACAGACGACAACCGCCGCCCCCACGACCGTACTGCGATATTTGTGAAGTATTTGGACACGCAACTGAGAACTGTGATGAGGAAGAAACATTTTAA

Protein

MPVETKISFSDGSSTDTLRKLSDDLSRKHLSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSIVSSKMNASISTTTNGDIRTGDRVIVSSSRGSKAGILRFVGPTDFAPGIWAGVELDDPLGKNDGSVDGKRYFDCAPRFGLFAPISKVSRSPSNRKPGACAIHSNGRATPLRRSNSRDSLTSLGTSIASSRVGVRLGVTSLGAQRVGGPRASSTPVSAKNALQELLREKQQHLERMMRERELERTEVAKISLQADRAETALTQLKKEASQTSNENVILKAELDKLNKLLEDERQKVEDLMFRNEEENINKEDYYRYKEAMEKEIAANEQRIRELEAEAALQLARADATATALRALEEQRNAEAATVAEQHREELSAAQTLSSELQKLLDEAYALLKEKENEKDSLGKSMSDELAKLKADSERALNEAKTKLAIVQTEFETQLSVLTAKLQLAESKLETEKQTLERTNKENSQTIIDLNTKLTQLQAAVDDKTIELNKVIAVTKEHEVNLNKEITKLKMELSARVIDLEQLEDTKRKQELACKNLEEEIARVRDECSIKVNEYEGILNEVTQQNEKNKTEISELQQSLSVKIKEYEKLLADSSTSSSSTEKLINEYKGTIHERDKEIIKLKDDYEQTTANFNIKHSKIAEEHKKEIDERNSRIEELIKEINSHKQTLDQNKVDFDALNSQFMQNANELKTLREENDKLKATINELTAANVELKAKLSTMELEVGELKRQLDSSLEKCEDLEKMKEKVESEYMNLTGQTSDSNDQFNKLSQHLKETESELREFKDKHREVVNNYARTEQELKQKLFKLQEDFSLERGQLVQSVNDNIEKIVETESKIKEFESQLFDINNRLKDALTANDSLTDENVILKKEIETLKLKEKELLEEHENIRKKLEVENDRFKEEVSMLKAEGATSEVKLMEKVDQLTEAQNDLNNKLEEARKHEDSLQKVLDDMTTQLNNQKTRYEKEISVLQSHLSTLTNDFSKNQADENVLKQQLEEKQNLIKDLTLKSEMLEVDLKSNVEMIKEKDRQIAQTNEEIIKANENRKQLEDTLNSAQLDISSLKQKYENLIANSSAEESLIKDQLEQLEEMKKEMTLIVQDKEMLQSKYNQAIEELKIVKEAHEVAVKSLKETTDMKDGLQRALDEKDSLLKSQTEVSKTELAKLKEVGEEVAKLKLDVANKDAALQEKETQLTSVADALKSGSNEMQKSLDEIQTKYDSLNEKYKTEVESLNNNLKSLQNQVSERQKEIEELREFKEKVTELQELLNKAEQDIKQLTNINEAQKLNYDDLNKQLQAQFDEYKKDSKRLKHELKAKLNEYEKELGQYKEKVKSESDKQNETVQKLIEAEKNVKELNQKFELVHDQQSSDAEKDVKLEKLSVELHVTKQSLANHIANNEAVVNKLKADIEHKLKDLKQKEDLISRLQDEVKNQRAKVEIAEREKVLLQKEIAKGNDLKDKNDNNAVGILGQGDTIATQKSQEDKEVIDGKVSFLNSVIVDMQRKNEQLMARVQVLEGSAGSIDPPLFNGRKVKAVAPRLFCDICDEFDAHDTEDCPRQAADIDAPATPANRRQPPPPRPYCDICEVFGHATENCDEEETF

Uniprot

H9JAP4   A0A2A4K0I1   A0A2A4K1H0   A0A2A4K112   A0A1E1WH09   A0A2H1WXU3   + More
A0A1E1WPS0   A0A1E1WSQ5   A0A3S2NYR6   A0A194QKX1   A0A1C9EGK8   A0A212EN90   A0A1E1W9J7   A0A1E1W950   A0A194PE53   A0A0L7LMG8   A0A2J7QMA0   A0A2J7QMC2   A0A0L7RIY3  

Pubmed

19121390    26354079    22118469    26227816   

EMBL

BABH01008631    BABH01008632    NWSH01000287    PCG77747.1    PCG77744.1    PCG77749.1    + More
GDQN01004785    JAT86269.1    ODYU01011890    SOQ57890.1    GDQN01002147    JAT88907.1    GDQN01000975    GDQN01000966    JAT90079.1    JAT90088.1    RSAL01000092    RVE47982.1    KQ461198    KPJ06218.1    KX778610    AON96622.1    AGBW02013697    OWR42946.1    GDQN01007429    GDQN01007218    GDQN01001417    JAT83625.1    JAT83836.1    JAT89637.1    GDQN01007569    JAT83485.1    KQ459606    KPI91626.1    JTDY01000539    KOB76738.1    NEVH01013214    PNF29724.1    PNF29722.1    KQ414582    KOC70907.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000007151    UP000053268    + More
UP000037510    UP000235965    UP000053825   

PRIDE

H9JAP4   

Pfam

PF01302   CAP_GLY        + More
PF16641   CLIP1_ZNF

Interpro

IPR032108   CLIP1_ZNF        + More
IPR036859   CAP-Gly_dom_sf       
IPR000938   CAP-Gly_domain       

SUPFAM

SSF74924   SSF74924       

Gene 3D

2.30.30.190    

ProteinModelPortal

H9JAP4   A0A2A4K0I1   A0A2A4K1H0   A0A2A4K112   A0A1E1WH09   A0A2H1WXU3   + More
A0A1E1WPS0   A0A1E1WSQ5   A0A3S2NYR6   A0A194QKX1   A0A1C9EGK8   A0A212EN90   A0A1E1W9J7   A0A1E1W950   A0A194PE53   A0A0L7LMG8   A0A2J7QMA0   A0A2J7QMC2   A0A0L7RIY3  

PDB

3RDV     E-value=2.51944e-27,     Score=310

KEGG

101739189    K10421 CAP-Gly domain-containing linker protein 1 | (RefSeq) restin homolog

GO

Length:

1700

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00076

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00004

outside

1  -  1700

 

 

Pi

206.987331

Theta

180.756642

Tajima's D

0.484474

CLR

0.741241

CSRT

0.512724363781811

Interpretation

Uncertain