Gene

KWMTBOMO05562

Pre Gene Modal

BGIBMGA006591

Annotation

hypothetical_protein_KGM_06029_[Danaus_plexippus]

Location

Bomo_Chr10(-):5119184-5125841      View in EpiBrowser

Full name

RING finger protein 10      

Location in the cell

Nuclear   Reliability : 4.079

CDS

ATGGACAAAAAATTAAATCGATCAACTCAACCACAGTCGAGGGCATCAGCCGTCGACTGTAAAAAGCACTCCGATTTGACTCACAAGCCTTGGCCCCGCAACAATAAGAAACGTGAAGGTCCTGGTGGCACACCTAAAAATGAACCATTTCGGAAAAATGTATCTGTACCAAGAGGTAGGGGTTCAGGTGACAGAAGATCACGTCCTCGTGAATCAGCCAGTTCACAAATGGATGGAACTCCGAACTCCAGGCTAGGGGATGATGATGAACCAGAAATAGGCTCAGTTTTTGTGCCTGGCAGTAAGAAACAGAACTTCAATCATTTGTTGAATTTTATGTACCCCACTAGGGGTAACATAGAACGCAGTGAACGGCGAGGACCACTGTTGCAACGTCAACAATTCCACCGTTTATCTTTTCGACAAGATCATGATCTGTACCTAAGAGCTTATTGTCAATTTGTAGTGAAGGAAGATTATGATTACAAGATAAACTCATTGGATCCTGATGTGCCAATTAAATGGGATGAAATTGAAGAAATTGTTGTAAGAAGCACTGGAAAGTCTGAATGCCCTATATGTTTGGGGACCCCAGTAGCTGGCCGTGTAGGTCTCTGTAGCCATGTGTATTGTTGGGCATGTGTTCTTCACTATGCTGCAGCGCATGAAAAACAACCTCCACCTTGTCCAGTGTGTACTGCACCCCTCAATGTTAAAGACATGAAACCTACTAAAATGCTGCAGTGGGATGCTCCTGCTGAGGAGGTAACAATGCGACTTGTTCGTCGCCTGCGTGGCTCTACAATAGTGGAAGTTGCACCACTGCGGGGTCAGGTCACTGATTCTATCCCCTCATCTATTTTGCCAATAGAGAATATCCATAGTGCACCATTTTGTAAAATGTTTTCTGCAAACAAACATCAGATTCATGAAATTTTAAAAAGGGAAAGAAATGAAATAGAAACCCAAATATTGGAAGAAATAGATACCACAGAAATAGTTTATCTAGAACAGGCTTTGCAAATGCTTAAACAGAAAGAAGATAAAATTGGACAAAAAAATGAGATGCTGAAAATTGATGTTGAAAATAATGAAGTCCCTCCTCCTATTGTGTATGAAAAGCAGGAGGTTAATGAAAACAAACTTGATTGGTTTAATGTTACTGACGATGGAGCTGCTTGTATGGAAGATATTCAAAATGAAATAGCAAATATTGATTTCAAAGAAACCAAATGGAACCCTGATGCTCCTGAATTCTCTCTAAATGAGGGTACTACTATACAGGCTTCAACTCAAGATGGAATAAATGATGTTTTTCTATCAGAAACTGATAATACGGACACAAATAAATACATAACAGATATTGACAAACAAAATCAGGCAAAATATTTTTATTTCTATCAAGCTGAAGACGGACAGCAAGTGTTTTTGAACAGCTTAAACGTGCGTATTCTGAATGAGTCTTGGGGCGCACTTGCTGCTGCACCTACAACCATCACTGGAAGGGTTCTACACCGTGAGACATTGCCCCTGACGGAACAGACAAGAAAACACATGCCATATACAGCGCATTTGCCTCTCTATTGCTCAGTAGATATAGTGGAGTTAGAACTACAACCTCCGTATGTGACAGCAAATGCACTTGAAAATTTCACTGAGGAATTATATCGGCGAGCTCGAGTCCGGGCCCGCCACGAACGGGACGAAAGGCGCCGCGAGCGCGCATACCGCCGCCAGATCGAAGGACCTCCTAAGCCGGACTTCTCCTCTGATGAACTGTTTCCGCCAGCTTCGTCATCATTTTCCAGCGCTGGAGTCGACCCGCCGCTTGCCGAAGAACCGAGCCCCTCTACGAGCATGAGCTCGCCGCCTCCATCAGGCCTGTCCTTTGCAAAGATGGCTGGTAGCAGTGGCACATGGCGCGTTCGGCCAACTGTCTCAGCTCCACCGCCACCGCCGCCGCCTGACGAGGAAGGCACGGGCCCACGTGCGCTCAACCTTAGCGACGCAATCGAGGCAGCCTTACACGCTGCACCGGTGCCCTCAACTAAGAAGAACAAAAAGTCCAAACAAAAAGTGCTTTTTGCCACTGGCATGCAACGTGCTGCCTAG

Protein

MDKKLNRSTQPQSRASAVDCKKHSDLTHKPWPRNNKKREGPGGTPKNEPFRKNVSVPRGRGSGDRRSRPRESASSQMDGTPNSRLGDDDEPEIGSVFVPGSKKQNFNHLLNFMYPTRGNIERSERRGPLLQRQQFHRLSFRQDHDLYLRAYCQFVVKEDYDYKINSLDPDVPIKWDEIEEIVVRSTGKSECPICLGTPVAGRVGLCSHVYCWACVLHYAAAHEKQPPPCPVCTAPLNVKDMKPTKMLQWDAPAEEVTMRLVRRLRGSTIVEVAPLRGQVTDSIPSSILPIENIHSAPFCKMFSANKHQIHEILKRERNEIETQILEEIDTTEIVYLEQALQMLKQKEDKIGQKNEMLKIDVENNEVPPPIVYEKQEVNENKLDWFNVTDDGAACMEDIQNEIANIDFKETKWNPDAPEFSLNEGTTIQASTQDGINDVFLSETDNTDTNKYITDIDKQNQAKYFYFYQAEDGQQVFLNSLNVRILNESWGALAAAPTTITGRVLHRETLPLTEQTRKHMPYTAHLPLYCSVDIVELELQPPYVTANALENFTEELYRRARVRARHERDERRRERAYRRQIEGPPKPDFSSDELFPPASSSFSSAGVDPPLAEEPSPSTSMSSPPPSGLSFAKMAGSSGTWRVRPTVSAPPPPPPPDEEGTGPRALNLSDAIEAALHAAPVPSTKKNKKSKQKVLFATGMQRAA

Description

Transcriptional factor involved in the regulation of MAG (Myelin-associated glycoprotein) expression. Acts as a regulator of Schwann cell differentiation and myelination.

Subunit

Interacts with MEOX2.

Similarity

Belongs to the RNF10 family.

Keywords

Alternative splicing   Complete proteome   Cytoplasm   DNA-binding   Metal-binding   Nucleus   Phosphoprotein   Polymorphism   Reference proteome   Transcription   Transcription regulation   Zinc   Zinc-finger  

Feature

chain  RING finger protein 10
splice variant  In isoform 2.
sequence variant  In dbSNP:rs17852961.

Uniprot

H9JAP6   A0A2A4JAK1   A0A212EN93   S4PFL0   A0A1C9EGL4   A0A3S2M018   + More
A0A194QLH5   A0A194PED6   A0A2H1WZV0   A0A0T6B794   A0A232FAD2   A0A067QK15   A0A087ZPN6   A0A2A3EGY0   E0VMW5   K7IQ76   A0A2J7RBE1   A0A146M6Z0   A0A0A9X2W5   A0A0K8T3Y9   A0A1B6C6T2   A0A069DX34   A0A2I9LPJ3   A0A161MGB7   A0A0L0CR02   A0A1B6KCA4   A0A0P4VP22   Q16XL9   A0A0N0BGX0   A0A1S4FKZ3   A0A023EVU2   A0A182H032   A0A2M4BEQ1   T1E8F9   A0A2M4BDY8   A0A2M4BDU9   A0A182PCY6   A0A2G8L985   H9G706   A0A2K5YP82   A0A2I3N7Y1   A0A2K5MHR2   A0A2K5WUI1   G3S499   Q4R444   A0A093I9F9   A0A099YWM2   A0A151N4H5   F6TJ93   A0A151N4D7   A0A226NKI6   A0A2K5YP90   A0A2K5JAY5   A5PL97   A0A096N564   A0A2K5MHQ5   U3J6M2   A0A384A9P2   Q8N5U6-2   A0A2K5YP80   A0A2J8XK16   A0A2Y9SJJ2   A0A2K6CB21   A0A2J8XK19   H2NIW1   A0A2K5WUW6   G7PJ49   H9ERI7   H3BFN3   Q08E13   A0A0D9S4J8   A0A341B6V3   A0A2J8XK06   A0A2R9C337   A0A2Y9FT28   A0A2Y9SLB5   G3S990   A0A226NAJ6   G3RCD7   R0JH07   B3KWY9   A0A2I3TNT5   A0A1V4JSQ1  

Pubmed

19121390    22118469    23622113    26354079    28648823    24845553    + More
20566863    20075255    26823975    25401762    26334808    29248469    26108605    27129103    17510324    24945155    26483478    29023486    21881562    22398555    15944441    22293439    17431167    24621616    23749191    10697961    9039502    12168954    15489334    16335786    23186163    22002653    25319552    9215903    22722832    14702039    16136131   

EMBL

BABH01008626    NWSH01002311    PCG68554.1    AGBW02013697    OWR42953.1    GAIX01003972    + More
JAA88588.1    KX778610    AON96616.1    RSAL01000092    RVE47989.1    KQ461198    KPJ06224.1    KQ459606    KPI91632.1    ODYU01012296    SOQ58532.1    LJIG01009385    KRT83186.1    NNAY01000613    OXU27398.1    KK853247    KDR09385.1    KZ288254    PBC30724.1    DS235327    EEB14721.1    NEVH01005906    PNF38149.1    GDHC01003115    JAQ15514.1    GBHO01032149    JAG11455.1    GBRD01005572    JAG60249.1    GEDC01028184    JAS09114.1    GBGD01000528    JAC88361.1    GFWZ01000315    MBW20305.1    GEMB01003113    JAS00096.1    JRES01000036    KNC34676.1    GEBQ01030895    JAT09082.1    GDKW01000048    JAI56547.1    CH477537    EAT39339.1    KQ435763    KOX75411.1    GAPW01000270    JAC13328.1    JXUM01100611    KQ564584    KXJ72061.1    GGFJ01002371    MBW51512.1    GAMD01002803    JAA98787.1    GGFJ01002086    MBW51227.1    GGFJ01002085    MBW51226.1    MRZV01000163    PIK56804.1    AAWZ02025412    AHZZ02003137    AQIA01013004    AQIA01013005    AQIA01013006    AQIA01013007    CABD030087085    CABD030087086    CABD030087087    CABD030087088    CABD030087089    AB179071    BAE02122.1    KL206976    KFV87772.1    KL887195    KGL74604.1    AKHW03004053    KYO31692.1    JSUE03007992    JSUE03007993    JSUE03007994    JSUE03007995    KYO31693.1    AWGT02005239    OXB68223.1    BC142798    AAI42799.1    ADON01119313    AB027196    D87451    BT006974    BC016622    BC031596    BC101709    BC101715    AL389976    NDHI03003364    PNJ82365.1    PNJ82367.1    ABGA01180282    ABGA01180283    ABGA01180284    ABGA01180285    ABGA01180286    ABGA01180287    ABGA01180288    ABGA01180289    ABGA01180290    CM001286    EHH66776.1    JU321240    JU472992    AFE64996.1    AFH29796.1    AFYH01006491    AFYH01006492    AFYH01006493    AFYH01006494    BC123470    BC146068    AQIB01027074    AQIB01027075    AQIB01027076    AQIB01027077    PNJ82363.1    AJFE02115708    AJFE02115709    AJFE02115710    AJFE02115711    AJFE02115712    AJFE02115713    AJFE02115714    MCFN01000114    OXB64625.1    KB744033    EOA96266.1    AK126274    BAG54301.1    AACZ04070289    AACZ04070290    AACZ04070291    AACZ04070292    LSYS01006629    OPJ74747.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000283053    UP000053240    UP000053268    + More
UP000215335    UP000027135    UP000005203    UP000242457    UP000009046    UP000002358    UP000235965    UP000037069    UP000008820    UP000053105    UP000069940    UP000249989    UP000075885    UP000230750    UP000001646    UP000233140    UP000028761    UP000233060    UP000233100    UP000001519    UP000053584    UP000053641    UP000050525    UP000006718    UP000198419    UP000233080    UP000016666    UP000261681    UP000005640    UP000233120    UP000001595    UP000009130    UP000008672    UP000009136    UP000029965    UP000252040    UP000240080    UP000248484    UP000198323    UP000002277    UP000190648   

PRIDE

H9JAP6    Q8N5U6    Q08E13    B3KWY9   

Pfam

PF00097   zf-C3HC4        + More
PF13639   zf-RING_2

Interpro

IPR001841   Znf_RING        + More
IPR039739   Mag2/Rnf10       
IPR017907   Znf_RING_CS       
IPR013083   Znf_RING/FYVE/PHD       
IPR018957   Znf_C3HC4_RING-type       

Gene 3D

3.30.40.10    

ProteinModelPortal

H9JAP6   A0A2A4JAK1   A0A212EN93   S4PFL0   A0A1C9EGL4   A0A3S2M018   + More
A0A194QLH5   A0A194PED6   A0A2H1WZV0   A0A0T6B794   A0A232FAD2   A0A067QK15   A0A087ZPN6   A0A2A3EGY0   E0VMW5   K7IQ76   A0A2J7RBE1   A0A146M6Z0   A0A0A9X2W5   A0A0K8T3Y9   A0A1B6C6T2   A0A069DX34   A0A2I9LPJ3   A0A161MGB7   A0A0L0CR02   A0A1B6KCA4   A0A0P4VP22   Q16XL9   A0A0N0BGX0   A0A1S4FKZ3   A0A023EVU2   A0A182H032   A0A2M4BEQ1   T1E8F9   A0A2M4BDY8   A0A2M4BDU9   A0A182PCY6   A0A2G8L985   H9G706   A0A2K5YP82   A0A2I3N7Y1   A0A2K5MHR2   A0A2K5WUI1   G3S499   Q4R444   A0A093I9F9   A0A099YWM2   A0A151N4H5   F6TJ93   A0A151N4D7   A0A226NKI6   A0A2K5YP90   A0A2K5JAY5   A5PL97   A0A096N564   A0A2K5MHQ5   U3J6M2   A0A384A9P2   Q8N5U6-2   A0A2K5YP80   A0A2J8XK16   A0A2Y9SJJ2   A0A2K6CB21   A0A2J8XK19   H2NIW1   A0A2K5WUW6   G7PJ49   H9ERI7   H3BFN3   Q08E13   A0A0D9S4J8   A0A341B6V3   A0A2J8XK06   A0A2R9C337   A0A2Y9FT28   A0A2Y9SLB5   G3S990   A0A226NAJ6   G3RCD7   R0JH07   B3KWY9   A0A2I3TNT5   A0A1V4JSQ1  

PDB

1CHC     E-value=0.00619566,     Score=96

KEGG

101736945    no KO assigned | (RefSeq) RING finger protein 10

GO

GO:0046872   GO:0016874   GO:0004842   GO:0005737   GO:0044212   GO:0051865   GO:0031643   GO:0045944   GO:0045893   GO:0010626   GO:0005634   GO:0005515   GO:0008270   GO:0016020   GO:0006974   GO:0001664   GO:0005525   GO:0007264   GO:0003824  

PANTHER

PTHR12983  

Subcellular location

Cytoplasm  
Nucleus  

Length:

703

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02339

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00247

outside

1  -  703

 

 

Pi

247.280752

Theta

211.24282

Tajima's D

-0.463569

CLR

1.775201

CSRT

0.251387430628469

Interpretation

Uncertain