SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05561
Pre Gene Modal
BGIBMGA006592
Annotation
PREDICTED:_kelch_domain-containing_protein_10_homolog_[Papilio_polytes]
Location in the cell
Extracellular   Reliability : 1.104
 

Sequence

CDS
ATGACATCACAGCGAAAAGATTATGTTTTCGAACCTTTTAAGGTAACCGAAGTGAAGTGTCGAGGTTTTGATTTTCCTAGGCCTAGAAGTGGACACAGAATTGCCTGCGACGATGTGAATTTATACTGTTTCGGAGGCTATAATCCGTTTTTACCTTTAGCAAACATAGACCTTGTGAATCCTACTTGGACATCAGCAAGACCTTTGTTTAAAGAGCTTTGGAGTTTTTCTATTGCCACTCGAAAGTGGAAGTTACACAAGGGATATGTAAACATGCCCGACGAATTGGCTTCTAATGCTATGTGTATTAATGGGCGGTATTTAATGATTTTTGGTGGCACAGGTGCACCATTTGGCAACAGATGTAGTAATGATGTCATTGTATGGAGGACTGGGTCAAAAGAAGCTAAGTTACAAATTCTAGATGTAACAGGAAACAGACCGCCTGGACAGTATGGCCAATCTGTTTTATGCCATGATGGTGGATTTTATGCTATAGGAGGCACCAACGGTTTTGCATATAACTGTGATATTTTCAGATTAGATTTAAGGACATTAGTTTGGGAACCAATATTTGTAGGAACTGGCCAAGAAGGTGAACCATTAGGACGATATAGACATGAAATAGCTCAAGTTGGTGATAATTTCTATGTCATTGGAGGAGGAACAGGAGATTTGGCTTTTGAATTAATGGAAATACCAGTTTTTAATCTCACTACAAAATCATGGACAATATTATCGGCCAAACCTGATGATAGTATGACAAATACAATAGCACCTTTACCGAGAAAATGTCATAGTGCTGTTCAAATAGATTCACCAAATGGTGTTCAAGTGTTTGTAGCAGGTGGTTCAGATGGTCAAGCGGTTTTTGAAGATATCTGGAGGTTAGACATTGCTGATCTGCAATGGACCCTTATGAAAAAAACTCAGTTACCTCATCCTTTGTACTTCCATTCATCAACAGTCACGTCCTCTGGTTGCATGTATATATTTGGTGGGATTGAGCCTAAAGAAGATGCAAACTGTAGAAATAATATTTTGTATAAAGTATGGTTATGTATACCAAAACTCAGTGAAATTTGTTGGGAAGCACTAACTTCATTCCATCCTAATCTAGACCAAGTTGACAGAAATACATTACTAAACACTGGTGTACCATTACACTTTGTAAATAGATTACATCCAGACTGGAAATAA
Protein
MTSQRKDYVFEPFKVTEVKCRGFDFPRPRSGHRIACDDVNLYCFGGYNPFLPLANIDLVNPTWTSARPLFKELWSFSIATRKWKLHKGYVNMPDELASNAMCINGRYLMIFGGTGAPFGNRCSNDVIVWRTGSKEAKLQILDVTGNRPPGQYGQSVLCHDGGFYAIGGTNGFAYNCDIFRLDLRTLVWEPIFVGTGQEGEPLGRYRHEIAQVGDNFYVIGGGTGDLAFELMEIPVFNLTTKSWTILSAKPDDSMTNTIAPLPRKCHSAVQIDSPNGVQVFVAGGSDGQAVFEDIWRLDIADLQWTLMKKTQLPHPLYFHSSTVTSSGCMYIFGGIEPKEDANCRNNILYKVWLCIPKLSEICWEALTSFHPNLDQVDRNTLLNTGVPLHFVNRLHPDWK

Summary

EMBL
NWSH01002311    PCG68555.1    ODYU01012704    SOQ59145.1    KX778610    AON96615.1    + More
GDQN01011621    JAT79433.1    BABH01008626    KQ459606    KPI91633.1    KQ461198    KPJ06225.1    JTDY01001877    KOB72655.1    AGBW02013697    OWR42954.1    GDQN01001483    JAT89571.1    KK107154    QOIP01000001    EZA56905.1    RLU27514.1    GEZM01055577    JAV73018.1    KZ288220    PBC32193.1    KQ435745    KOX76601.1    JR044094    AEY59841.1    KQ971372    EFA10306.1    GEZM01055578    JAV73017.1    GFDL01012384    JAV22661.1    ADTU01013728    DS231813    EDS25738.1    GEHC01000624    JAV47021.1    GL762865    EFZ20633.1    KQ414582    KOC70825.1    GAPW01001478    JAC12120.1    CH477822    EAT35926.1    KQ978287    KYM95621.1    GL888103    EGI67363.1    LJIG01022666    KRT79358.1    NNAY01000837    OXU26255.1    GL445346    EFN89737.1    PYGN01002302    PSN30842.1    KQ434874    KZC09725.1    KK852556    KDR21423.1    CP012524    ALC42409.1    AAAB01008948    EAA10479.4    NEVH01006727    PNF36871.1    APCN01004678    KQ976736    KYM76028.1    BT127772    AEE62734.1    ATLV01023073    KE525340    KFB48395.1    GFDF01010183    JAV03901.1    AXCN02000971    GFDF01005998    JAV08086.1    GANO01002788    JAB57083.1    CH940648    EDW62173.1    GGFK01008370    MBW41691.1    GGFK01008151    MBW41472.1    GGFL01005694    MBW69872.1    GGFK01008519    MBW41840.1    ADMH02001573    ETN62027.1    GGFJ01005410    MBW54551.1    GL438827    EFN68239.1    GEBQ01004380    JAT35597.1    CH916367    EDW01864.1    GFDG01003416    JAV15383.1    CH933808    EDW08758.1    GFDG01000479    JAV18320.1    CH479183    EDW36403.1    CM000071    EAL25897.2    GFDG01004087    JAV14712.1    CH902619    EDV36416.2    UFQS01002298    UFQT01002298    SSX13724.1    SSX33145.1    OUUW01000001    SPP75854.1    GBXI01017198    JAC97093.1    CH964282    EDW85724.1    AJVK01024819    AJVK01024820    KQ979479    KYN21355.1    JRES01000729    KNC28931.1    KA645528    KA645529    AFP60158.1    KB632136    ERL89042.1    APGK01029469    KB740735    ENN79147.1    GBYB01005417    JAG75184.1    CH954179    KQS62089.1    AY058460    AAL13689.1    GDHF01001340    JAI50974.1    EDV55086.1    LJIJ01000074    ODN03425.1    GAKP01015546    JAC43406.1   
Pfam
PF01344   Kelch_1        + More
PF07646   Kelch_2
PF13521   AAA_28
PF02933   CDC48_2
PF02359   CDC48_N
PF17862   AAA_lid_3
PF00004   AAA
PF00151   Lipase
Interpro
IPR015915   Kelch-typ_b-propeller        + More
IPR006652   Kelch_1       
IPR011043   Gal_Oxase/kelch_b-propeller       
IPR011498   Kelch_2       
IPR038727   NadR/Ttd14_AAA_dom       
IPR033469   CYTH-like_dom_sf       
IPR003593   AAA+_ATPase       
IPR041569   AAA_lid_3       
IPR009010   Asp_de-COase-like_dom_sf       
IPR000734   TAG_lipase       
IPR039812   Vesicle-fus_ATPase       
IPR029067   CDC48_domain_2-like_sf       
IPR003959   ATPase_AAA_core       
IPR004201   Cdc48_dom2       
IPR013818   Lipase/vitellogenin       
IPR003960   ATPase_AAA_CS       
IPR027417   P-loop_NTPase       
IPR003338   CDC4_N-term_subdom       
IPR029058   AB_hydrolase       
SUPFAM
SSF117281   SSF117281        + More
SSF50965   SSF50965       
SSF55154   SSF55154       
SSF54585   SSF54585       
SSF50692   SSF50692       
SSF52540   SSF52540       
SSF53474   SSF53474       
Gene 3D
PDB
6DO5     E-value=3.31035e-12,     Score=173

Ontologies

Topology

Subcellular location
Secreted  
Length:
399
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.48726
Exp number, first 60 AAs:
0.13506
Total prob of N-in:
0.04078
outside
1  -  399
 
 

Population Genetic Test Statistics

Pi
239.755234
Theta
197.805698
Tajima's D
-0.43406
CLR
2.764609
CSRT
0.257937103144843
Interpretation
Uncertain
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