SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05559
Pre Gene Modal
BGIBMGA006596
Annotation
PREDICTED:_adenosine_receptor_A3_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 2.816
 

Sequence

CDS
ATGAAGGCAGATCCGGTAGTAGTGGAAGGAGTTCCTCATCCTATGGAAAGAGTTATGGCTCAAGGTCAAGTTATAAGCCATCTTCGAGTAGTTATGGGAGTCATAGTTACTCACCGTCGTACTCGAGCAGTTTTGGGAGTCATAGTTACTCACCGTCGTACTCGAGCAGTTCCGGAAGTAAGCCGAGCTATCCTTCATCTGGATCAGGATTGTCAGGATCCGGAAGTAAACCAAGTTATTCCTCATCATGGTTCGGGTCATCAAGCTCGGGAAGTAAGCCGAGCTATCCTTCATCTGGATCAGGATTGTCAGGATCCGGAAGTAAACCAAGTTATTCTTCATCATGGTTCGGGTCATCAAGCTCTGGAAGTAAACCGAGCTATCCTTCATCAATATCGGGATTGTCAGGATCTGGAAGATCTGGGCTGTACGGATCAGGAAGCAAACCAAGCTACCCTTCATCAATATCTGGATTGTCAGGATCTGGAAGTAAGCCAAGTTATACCTCATCGGGCTACAAACCCAGCTACATCTCACATAGTTCCCATACTCCAACGTATGGGTCTTCACATGGCTACAACAACTACGGTTCGCACGCTACATATATCCCTCATCGCTCATATTATACGTCTCCACAGAATAATCTCTGTTTGCTGGGTAGCTGGCGCCGTAGTTGGACTACTACCTTTGTTTGGTTGGCACGCAGTAGTGGACTCGGCTCCGGGATGCTATTTCGTAGACGTCATGGACTACAATTATTTGCTGTTCCTCTATTTTGCGACAATCGTGACTCCGAGCGTCTTGTTAGCTGCTTTCTATGCCCACATCTACCGAGTGGTTGTTAAGCAGTTGAGCCAGGTAATGACTGTCGAGGGCGGGCACGGACGCATCGCCGGCGGTGGAACCATGCTCCGTGTGCTTGGGGCGGCGCAGAAACGCGAAGTAAAAGCTACTCAAAACCTTGCGGTCATCGTTTTTTTCTTTATACTATGCTGGATGCCACTTTATACCATCAACGCTGTCAAAGCATTCATGCCAGAGCTGGACATTCCGAACCCTCTTACGTATTTTTGTATTATCTTCTCTCATCTTAATTCCGCCATCAATCCCTTGTTGTATGCGTATCATCTTAAAGATTTTCGTGCTGCCCTGAAAGGTCTGATATGCACAATGATAGGACACGGAGTGCCGATGCCGGCTGCTTACAGACCGCCAGTGCCTATGTCGAGACCGGCTTTGGAAAGGTGTAACGCTTTGAGAGAGCGTCCCCGTATGTACACAGATTCACCTGTGTGGCTCCGTCAAAAGGAAATGGAGAACAGTCTCGCGGAGAAAAATAGAGCGGTGACACCTTCAGTACCTGTAGTCAATGATATAGAACCGTTTCTGAAGAAAGCTAATGATAGTTCAAGCGGATGTGTTACACCCGATGCTAGGCTCAGCGAGACCGGCCCTTATGTCATAGAGAACAGTCCAGATAATATTCCTTACAAAAGAGTCGAAGACTTCATTAGGAGAGTGCGTAGTGCTAGTGATGAACATAGCTGA
Protein
MKADPVVVEGVPHPMERVMAQGQVISHLRVVMGVIVTHRRTRAVLGVIVTHRRTRAVPEVSRAILHLDQDCQDPEVNQVIPHHGSGHQAREVSRAILHLDQDCQDPEVNQVILHHGSGHQALEVNRAILHQYRDCQDLEDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVPILQRMGLHMATTTTVRTLHISLIAHIIRLHRIISVCWVAGAVVGLLPLFGWHAVVDSAPGCYFVDVMDYNYLLFLYFATIVTPSVLLAAFYAHIYRVVVKQLSQVMTVEGGHGRIAGGGTMLRVLGAAQKREVKATQNLAVIVFFFILCWMPLYTINAVKAFMPELDIPNPLTYFCIIFSHLNSAINPLLYAYHLKDFRAALKGLICTMIGHGVPMPAAYRPPVPMSRPALERCNALRERPRMYTDSPVWLRQKEMENSLAEKNRAVTPSVPVVNDIEPFLKKANDSSSGCVTPDARLSETGPYVIENSPDNIPYKRVEDFIRRVRSASDEHS

Summary

Uniprot
ProteinModelPortal
PDB
6GDG     E-value=5.44137e-24,     Score=276

Ontologies

Topology

Length:
515
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
96.78663
Exp number, first 60 AAs:
1.32271
Total prob of N-in:
0.78468
inside
1  -  214
TMhelix
215  -  237
outside
238  -  251
TMhelix
252  -  274
inside
275  -  320
TMhelix
321  -  338
outside
339  -  352
TMhelix
353  -  375
inside
376  -  515
 
 

Population Genetic Test Statistics

Pi
236.790012
Theta
189.711023
Tajima's D
0.646807
CLR
0
CSRT
0.554272286385681
Interpretation
Uncertain
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