Gene

KWMTBOMO05558

Pre Gene Modal

BGIBMGA006597

Annotation

olfactory_receptor_55_[Bombyx_mori]

Location

Bomo_Chr10(-):5044499-5048331      View in EpiBrowser

Full name

Odorant receptor      

Location in the cell

PlasmaMembrane   Reliability : 4.794

CDS

ATGTGTTTTCTGAAAATTAAACAACAAATTAATGATATTCAGAAACATTTCAAAGATTATAGTTTAAATGGTTCTTTGTGGATCGTGAATTTATTACCGCGTCTAATGGGATTTAATTTGAGAGCAGATAAAGTGGGTGTATTCTTCTGGACAATTTACATTCTTCTACTGGTCTACGTATTTGGGATCGGAATTTTTGTTTACCTGTGGAAACATGTTGACACAATGAACGGTTTGATGAAGAGCTATTTAAATTTGTCTTTGATTCTCGTCATCGTTAACAACAGTTGGTGGTTTCTCTCAAAAAGATCTTTATTGAACACAGTACTTAAGAAGATTCATTTGATTGAAGATTTGTCTTGTGAATCAGAGCACGCGCTGGCAAAGTACAGACGGGTTTTCAAAATTGTAACTCATCTGCTGCTAGCGTCTTACGTTTTATTTTATTTCATGGAAATATATTTTATGTTTCTATTTCGTAATTACGATCTGTTGGAAGATTATTCTCTAGCTCCTTGTGTAGGCTTAGAACTTTTGTCCAGTTCACCAAACTCGGAAATTTGTTTAATCATTGTATTAATACACGAATTCATATCTACTACAGTCATGATGAGTTTCGCTGCACTATTTTTAGTGCTAATAGCTCACACTGCTGTCATGTTCCTTGTACTAGCAGAAGACATGACAAAACTGACTGACTTAATCAATTTGGCGGATCACAGAAAAATTATAAGAGAATCATTGCGTTCGTTAATTAATCGTCACTCTTTACTTTTGCAAATAGTTTACGAGCTTCGGTTATTGTACAGCGTACCTGTAGGCATAAATTTTATTTCGAACGCTATGAGCATATTGGTGCTTTTGTGTTTACCGATTCACGAGTGGCCGTCCTTCTTACATATCATAGGTTATTGCTTTTTCGCTTTTTTCTTGTATTGTTTTCTGGGCCAAAACGTGATTAACGCGTCTGAGAAATTCATTAATGCGGTATATTGTTGTGGTTGGGAGCATTTTGGTGTAGCTGAAAAGAAGCTGGTGCATGTGATGCTGAGACAGGCACAGAAACCCGTGGAGATAATAGCTCTAGGAATGATTTCTGTCAACATGAACACGTATGTAGAAGCGCTGCAATTGATTTACAAGTTTGTGACTGTTCTAAAGATTTAA

Protein

MCFLKIKQQINDIQKHFKDYSLNGSLWIVNLLPRLMGFNLRADKVGVFFWTIYILLLVYVFGIGIFVYLWKHVDTMNGLMKSYLNLSLILVIVNNSWWFLSKRSLLNTVLKKIHLIEDLSCESEHALAKYRRVFKIVTHLLLASYVLFYFMEIYFMFLFRNYDLLEDYSLAPCVGLELLSSSPNSEICLIIVLIHEFISTTVMMSFAALFLVLIAHTAVMFLVLAEDMTKLTDLINLADHRKIIRESLRSLINRHSLLLQIVYELRLLYSVPVGINFISNAMSILVLLCLPIHEWPSFLHIIGYCFFAFFLYCFLGQNVINASEKFINAVYCCGWEHFGVAEKKLVHVMLRQAQKPVEIIALGMISVNMNTYVEALQLIYKFVTVLKI

Similarity

Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.

Uniprot

C4B7Y3   B1B1Q4   C4B7Y2   A0A076E7M4   I3Y3I0   H9JAQ3   + More
A0A2H1VVR0   A0A076E7J1   A0A2K8GKS6   A0A1B3P5N6   A0A1S5XXQ0   A0A3G6V6P2   A0A212F4V0   A0A0E4B420   A0A1B2G2M9   A0A2L1TG74   A0A146JXX9   A0A1X9PEW2   A0A223HD16   A0A097IYL1   A0A1L2BLB8   H9A5Q4   A0A0K8TUT7   A0A223HDF1   A0A386H9B3   A0A2H1VVP4   A0A194QL24   A0A0B5CMZ9   A0A0B5GI86   A0A0S1TQ21   A0A194PE64   A0A212F4V8   A0A076E9B9   A0A2A4JHA7   A0A1B3B746   A0A076E7I0   A0A2K8GL32   A0A0L7LUX5   A0A2A4JHE5   A0A075T642   A0A194PKL6   A0A2L1TG30   A0A386H9F4   A0A0V0J1D8   A0A2H1WG60  

Pubmed

19427209    24998398    22646846    19121390    28736530    27538507    + More
23950722    30465940    22118469    28150741    25252791    22363688    27006164    26017144    26354079    26812239    29375398    26227816    25027790   

EMBL

AB472132    BAH66349.1    AB186513    BAG12812.1    AB472131    BAH66348.1    + More
KF487694    AII01092.1    JQ794810    AFL70815.1    BABH01008620    ODYU01004718    SOQ44898.1    KF487659    AII01057.1    KX585331    ARO70224.1    KX655979    AOG12928.1    KY399296    AQQ73527.1    MH193974    AZB49420.1    AGBW02010309    OWR48756.1    LC002705    BAR43453.1    KU598899    ANZ03145.1    KY707235    AVF19677.1    GEDO01000061    JAP88565.1    KX084462    ARO76417.1    KY283609    AST36268.1    KM655549    AIT71999.1    KT860046    ALS03873.1    JN836704    AFC91744.1    GCVX01000194    JAI18036.1    KY283739    AST36398.1    MG546620    AYD42243.1    SOQ44899.1    KQ461198    KPJ06232.1    KM678312    AJE25885.1    KM892386    AJF23801.1    KR935747    ALM26239.1    KQ459606    KPI91641.1    OWR48753.1    KF487696    AII01094.1    NWSH01001579    PCG70813.1    KT588131    AOE48041.1    KF487649    AII01047.1    KY225489    ARO70501.1    JTDY01000047    KOB79194.1    PCG70812.1    KF768691    AIG51885.1    KPI91640.1    KY707209    AVF19651.1    MG546633    AYD42256.1    GDKB01000050    JAP38446.1    ODYU01008444    SOQ52063.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000218220    UP000037510    + More

PRIDE

C4B7Y3    B1B1Q4    C4B7Y2    H9JAQ3   

Pfam

PF02949   7tm_6

Interpro

IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

C4B7Y3   B1B1Q4   C4B7Y2   A0A076E7M4   I3Y3I0   H9JAQ3   + More
A0A2H1VVR0   A0A076E7J1   A0A2K8GKS6   A0A1B3P5N6   A0A1S5XXQ0   A0A3G6V6P2   A0A212F4V0   A0A0E4B420   A0A1B2G2M9   A0A2L1TG74   A0A146JXX9   A0A1X9PEW2   A0A223HD16   A0A097IYL1   A0A1L2BLB8   H9A5Q4   A0A0K8TUT7   A0A223HDF1   A0A386H9B3   A0A2H1VVP4   A0A194QL24   A0A0B5CMZ9   A0A0B5GI86   A0A0S1TQ21   A0A194PE64   A0A212F4V8   A0A076E9B9   A0A2A4JHA7   A0A1B3B746   A0A076E7I0   A0A2K8GL32   A0A0L7LUX5   A0A2A4JHE5   A0A075T642   A0A194PKL6   A0A2L1TG30   A0A386H9F4   A0A0V0J1D8   A0A2H1WG60  

KEGG

100379196    K22984 odorant receptor | (RefSeq) Or-55, BmOr-55; olfactory receptor 55

GO

GO:0005549   GO:0005886   GO:0016021   GO:0007165   GO:0004984   GO:0007608   GO:0016020   GO:0046872   GO:0006974   GO:0001664   GO:0005525   GO:0007264   GO:0003824  

PANTHER

PTHR21137  

Subcellular location

Cell membrane  

Length:

388

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

142.9712

Exp number, first 60 AAs:

18.37519

Total prob of N-in:

0.97769

POSSIBLE N-term signal

sequence

inside

1  -  45

TMhelix

46  -  68

outside

69  -  82

TMhelix

83  -  100

inside

101  -  135

TMhelix

136  -  158

outside

159  -  201

TMhelix

202  -  224

inside

225  -  266

TMhelix

267  -  289

outside

290  -  298

TMhelix

299  -  321

inside

322  -  388

 

 

Pi

277.564568

Theta

170.260833

Tajima's D

1.766291

CLR

0.012806

CSRT

0.840857957102145

Interpretation

Uncertain