Gene

KWMTBOMO05557

Pre Gene Modal

BGIBMGA006598

Annotation

olfactory_receptor_54_[Bombyx_mori]

Location

Bomo_Chr10(-):5034735-5039401      View in EpiBrowser

Full name

Odorant receptor      

Location in the cell

PlasmaMembrane   Reliability : 4.902

CDS

ATGGGCTTGAATACGATTAAAGAGTTCTTTGTCAATGTAAAAAGACGATTTCAAGATGTCAGCATTGACAGTCTACTGTGGATAGTGAACATTGTTCCCAGTTTGGCTGGGTTCTCGATTCGCAGTGATAGAGTTTCTGCTCCATTTTGGATAGTTCACTGGTCGTTACTCGTGTATGTCTACGCGGTCGGCAATGCAGTATACCAATGGAAATTCGCCAACGAAGCTATAGACTACATCACGAGCTTCATAAATGTTTCACTTTTGATCTTGATCGGCAATAACAGCTGGTGGTTCCTTGCTAATAGACGCTTACTGAAGTCGGTGCTCCACAAGATCGAAGTAAACGACGAACTGTCTCGTCGCTCGGAGCAATCGCGTCTCAAACACAAGAAACTTTTGAAGATAATCAAACGAATCGTGCTAGTGTTCTATATGTCTAATTATGTGAATGCCTCGTTTATATATTTGCCTAATCGCGTTGACGTTCTGAACAATTATGCCATGACGCCGTGTGTTGGAATGGAACCATTGACCGTCTCCCCAAATCGAGAACTATGCTTGACTATTCTCTGCATGCAAGAATTCTCAATAATGACGGTTGTCTTAAACTTTCAAGCTCTACTTCTGTGTTTTATAGCACACACGGCCGTGATGTTTCAGATTTTGGCCGACGAGATAATGGCTCTAAATAATTATGAGAATTTAGAAGAACATCAGGCATATGTGAAAGAAACGTTGCCAATTTTAGTCAAACGCCATTCTTTGACTTTATCAGTTGTAGACAATTACAAATCATTGTACAGCGTTCCACTGGGGGTCAATTTCGGTTCAAACGCACTAACTATTCTTTTAATATTGTATTTACCCATTCTCGAATGGTTTAAATTCATTCCGATATTCGTTTTTTGTTTTATGTTATTCTTCCTTTACTGCTTTCTGTGCCAGAAACTAGTCAATGCGTCTGAAGCATTTGAAACAGCGATTTATTGCTGTGGATGGGAGAATTTCGCTTTGAGGGAAATGAAGATGATTTATGTGATGCTCCATCAGGCTCAAAGGCCGGTCGAATTGTTGGCAGCTGACATAGTACCTGTGAACATGAACACCTTTGCCACAACTCTGCAGGCCATGTATAAATTTGTAACTGTAGTTAAATTTTAA

Protein

MGLNTIKEFFVNVKRRFQDVSIDSLLWIVNIVPSLAGFSIRSDRVSAPFWIVHWSLLVYVYAVGNAVYQWKFANEAIDYITSFINVSLLILIGNNSWWFLANRRLLKSVLHKIEVNDELSRRSEQSRLKHKKLLKIIKRIVLVFYMSNYVNASFIYLPNRVDVLNNYAMTPCVGMEPLTVSPNRELCLTILCMQEFSIMTVVLNFQALLLCFIAHTAVMFQILADEIMALNNYENLEEHQAYVKETLPILVKRHSLTLSVVDNYKSLYSVPLGVNFGSNALTILLILYLPILEWFKFIPIFVFCFMLFFLYCFLCQKLVNASEAFETAIYCCGWENFALREMKMIYVMLHQAQRPVELLAADIVPVNMNTFATTLQAMYKFVTVVKF

Similarity

Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.

Uniprot

H9JAQ3   C4B7Y2   B1B1Q4   A0A076E7M4   I3Y3I0   A0A1B2G2M9   + More
A0A2H1VVR0   A0A1S5XXQ0   A0A146JXX9   A0A1X9PEW2   A0A3G6V6P2   A0A1B3P5N6   A0A1L2BLB8   A0A0E4B420   A0A212F4V0   A0A076E7J1   A0A2L1TG74   A0A2K8GKS6   A0A194QL24   H9A5Q4   A0A386H9B3   A0A223HD16   A0A0K8TUT7   A0A0L7LUX5   A0A223HDF1   C4B7Y3   A0A097IYL1   A0A0B5GI86   A0A212F4V8   A0A0B5CMZ9   A0A2H1VVP4   A0A076E7I0   A0A076E9B9   A0A0S1TQ21   A0A2K8GL32   A0A1B3B746   A0A194PE64   A0A2A4JHA7   A0A075T642   A0A2A4JHE5   A0A194PKL6   A0A2L1TG30  

Pubmed

19121390    19427209    24998398    22646846    23950722    30465940    + More
27538507    22118469    28736530    26354079    22363688    27006164    28150741    26017144    26227816    25252791    26812239    29375398    25027790   

EMBL

BABH01008620    AB472131    BAH66348.1    AB186513    BAG12812.1    KF487694    + More
AII01092.1    JQ794810    AFL70815.1    KU598899    ANZ03145.1    ODYU01004718    SOQ44898.1    KY399296    AQQ73527.1    GEDO01000061    JAP88565.1    KX084462    ARO76417.1    MH193974    AZB49420.1    KX655979    AOG12928.1    KT860046    ALS03873.1    LC002705    BAR43453.1    AGBW02010309    OWR48756.1    KF487659    AII01057.1    KY707235    AVF19677.1    KX585331    ARO70224.1    KQ461198    KPJ06232.1    JN836704    AFC91744.1    MG546620    AYD42243.1    KY283609    AST36268.1    GCVX01000194    JAI18036.1    JTDY01000047    KOB79194.1    KY283739    AST36398.1    AB472132    BAH66349.1    KM655549    AIT71999.1    KM892386    AJF23801.1    OWR48753.1    KM678312    AJE25885.1    SOQ44899.1    KF487649    AII01047.1    KF487696    AII01094.1    KR935747    ALM26239.1    KY225489    ARO70501.1    KT588131    AOE48041.1    KQ459606    KPI91641.1    NWSH01001579    PCG70813.1    KF768691    AIG51885.1    PCG70812.1    KPI91640.1    KY707209    AVF19651.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000037510    UP000053268    UP000218220    + More

PRIDE

H9JAQ3    C4B7Y2    B1B1Q4    C4B7Y3   

Pfam

PF02949   7tm_6

Interpro

IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

H9JAQ3   C4B7Y2   B1B1Q4   A0A076E7M4   I3Y3I0   A0A1B2G2M9   + More
A0A2H1VVR0   A0A1S5XXQ0   A0A146JXX9   A0A1X9PEW2   A0A3G6V6P2   A0A1B3P5N6   A0A1L2BLB8   A0A0E4B420   A0A212F4V0   A0A076E7J1   A0A2L1TG74   A0A2K8GKS6   A0A194QL24   H9A5Q4   A0A386H9B3   A0A223HD16   A0A0K8TUT7   A0A0L7LUX5   A0A223HDF1   C4B7Y3   A0A097IYL1   A0A0B5GI86   A0A212F4V8   A0A0B5CMZ9   A0A2H1VVP4   A0A076E7I0   A0A076E9B9   A0A0S1TQ21   A0A2K8GL32   A0A1B3B746   A0A194PE64   A0A2A4JHA7   A0A075T642   A0A2A4JHE5   A0A194PKL6   A0A2L1TG30  

KEGG

100144598    K22984 odorant receptor | (RefSeq) Or-54, BmOR-11, BmOr-54; olfactory receptor 54

GO

GO:0007165   GO:0016021   GO:0004984   GO:0005886   GO:0005549   GO:0007608   GO:0016020   GO:0046872   GO:0006974   GO:0001664   GO:0005525   GO:0007264   GO:0003824  

PANTHER

PTHR21137  

Subcellular location

Cell membrane  

Length:

387

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

144.49543

Exp number, first 60 AAs:

29.16144

Total prob of N-in:

0.30843

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  40

inside

41  -  46

TMhelix

47  -  69

outside

70  -  78

TMhelix

79  -  101

inside

102  -  139

TMhelix

140  -  157

outside

158  -  195

TMhelix

196  -  218

inside

219  -  269

TMhelix

270  -  292

outside

293  -  296

TMhelix

297  -  314

inside

315  -  387

 

 

Pi

239.216208

Theta

172.561346

Tajima's D

1.152787

CLR

0

CSRT

0.699015049247538

Interpretation

Uncertain