Gene

KWMTBOMO05549

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr10(-):4680039-4685106      View in EpiBrowser

Full name

PiggyBac transposable element-derived protein 4      

Location in the cell

Nuclear   Reliability : 1.289 PlasmaMembrane   Reliability : 1.664

CDS

ATGGAAAGATTTAACCTTATTGCAATTGAGGATTTGCCCGCTGGGGAACCGATAGAGCAGGCATTGACGGAGCGAAGTACGTTGAATGTGGCGGCAGTGGTACGAGCACGCCATCTTCTAGATATAATATACAGATTTCTGTACATGGCAGCCGTAGTCCTTCGCCGTCACATAAACGTGTGCGTCGATCGCTTTGCCCAGACCAAGAACATGATATTACGAAGTGACGACGATGACAGCGATGATGAGAGCCAGAATGATAACGACGAAATCGTTCCCATGATTATCCCCCGGGCAGCTGGAATACTGATGGACACTCCGGACGACGAGGAGATTGAGATTGACACGGCGGCGGCAACTAAACCTCTTGTGACATCTTCCTCGCCTTCCATCATTTCAGCACCTACATCACCAGCTCGTGATACCGGTATGAAGCCTAGTCATTTTTTTGAATTTGACTGGGGAACTTTCCCTGACTCTCCTATACCGCCAACAGAAAGGCGTGAATCTTTTAAGGAACACTCTGGTCCCACTGTCGCTGTAAGTGACCCTTACGAGATTTTTAGACTAATTTGGGACCAGGAGTTCATGGAATTTATTGTGCAGGAAACAAATAGATATGCCCAACAATTAGCTGCTGAAATGTTGGACGGCGGGGAATTACAGGCCTCCAGTAGGATTACAGAATGGAAAGAAACCAATGTAGACGAGTTATTGGTGTTCTTCGGAATATTACTGGCGATGGGAATCGTCATAAAGAACCGGGTTGAAGAGTACTGGAATACGGAACAAAACATCTTCTCCACTCCAGGTTTCAAAGTATATATGTCGCTTAGGAGGTTCCAGTTACTCAGCAGGTGCTTACATTTTAATAATTCCGAGAACTTGAGAAACCTCAACCTGGATCCCTCACAGGCAAAGCTTTTTAAAGTGGAGCCTGTGATTAGCCATTTGAATTCCAAGTTCACGGAATTATATATAATGAAGCAGAACATTGCTTTAGATGAATCGCTGCTGCAGTGGAAAGGTTGGTTGAACATCAACCAATTTATTCCAAACAAAGCTGCAGCAGTGGGCATAAAAACTTACGAAATATGTGAGTCGCAGACGGGGTATTTATGGCGATTTAAAATCCATGCCCATAAGGCTTCGCCTACAGTCTCAGAGGCTGATCCATTCACAGCGAGTACACCGGCGTTGGTTCTTAACCTTATCAAAGGTTTAGAACACAAAGGGTACACGTTGTGGATGGATAACTTCTACAATTCCCCAGCACTTGCCCGAAAACTCAAGTCGATTGGGTTTGATTGTGTCGGTACGTTGCGGACAAACCGCAAGTATGTCCCGACGGAACTGACCAATCTGAAAAAATCTCAGATGAAGCCCGGGCAAGTAGTAGGCTATACCAGTGGAGATGTCGATTGCATAATATGGAGAGATCAGAACCGCGTAGCGACGATCTCAACGTACCATGGCAATGCCGTCTCCACTAAAAACGGAGTAACAAAACTTATTTTGATACGTGACTACAACATCTGCATGGGTGGCGTGGATAAAAAAGATCAAATGTTGGCTGCATTCCCAATTGAACGCAAGAGGACACAAATTTGGTACAAGAAATTGTTTAAAAGTTATTATTAG

Protein

MERFNLIAIEDLPAGEPIEQALTERSTLNVAAVVRARHLLDIIYRFLYMAAVVLRRHINVCVDRFAQTKNMILRSDDDDSDDESQNDNDEIVPMIIPRAAGILMDTPDDEEIEIDTAAATKPLVTSSSPSIISAPTSPARDTGMKPSHFFEFDWGTFPDSPIPPTERRESFKEHSGPTVAVSDPYEIFRLIWDQEFMEFIVQETNRYAQQLAAEMLDGGELQASSRITEWKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNNSENLRNLNLDPSQAKLFKVEPVISHLNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICESQTGYLWRFKIHAHKASPTVSEADPFTASTPALVLNLIKGLEHKGYTLWMDNFYNSPALARKLKSIGFDCVGTLRTNRKYVPTELTNLKKSQMKPGQVVGYTSGDVDCIIWRDQNRVATISTYHGNAVSTKNGVTKLILIRDYNICMGGVDKKDQMLAAFPIERKRTQIWYKKLFKSYY

Keywords

Complete proteome   Reference proteome  

Feature

chain  PiggyBac transposable element-derived protein 4

Uniprot

A0A194RRT0   A0A3S2TBD2   A0A3S2PA36   A0A3S2NGQ2   A0A2H1V5F3   A0A3S2LRG0   + More
A0A2W1BDM1   A0A0L7L984   A0A2A4IY54   A0A2W1B9N8   A0A3S2TTE3   A0A2A4IYX3   A0A2J7Q6H1   A0A2J7PD69   A0A2J7PRG6   A0A2J7PIK3   A0A2J7QZK8   A0A2J7PER0   A0A2A4ITI3   A0A2W1BNR3   A0A3S2NWG9   A0A2J7QSN3   A0A147BD88   A0A3S2NSV7   A0A2K6S7R1   A0A2K5BXT0   F7FDY8   H9F6U8   A0A096NT85   G7MWA2   G7PAN9   A0A2K6ALX5   A0A2K5XAW3   A0A2K5KZS5   Q96DM1   A0A2K5UF88   G3QWT8   A0A2K6NHE6   A0A2K6JV20   A0A1D5R1S0   H2NMQ4   A0A0D9SEG0   K7DKZ9   A0A2K5HN84   A0A1B6H7X0   A0A147BEZ3   A0A1B0FFI5   A0A1B6LW93   A0A1B6KKZ3   A0A087UJ51   A0A087TJF5   A0A1B6E873   A0A3Q0JNJ9   A0A2J7Q4C7   A0A1B6E8U4   A0A1B6LFF4   A0A1A8PBD7   A0A1A8PXY9  

Pubmed

26354079    28756777    26227816    29652888    25319552    22002653    + More
14702039    16572171    22398555    25362486    17431167    16136131   

EMBL

KQ459989    KPJ18766.1    RSAL01001012    RVE40990.1    RSAL01000155    RVE45659.1    + More
RSAL01000045    RVE50637.1    ODYU01000749    SOQ36006.1    RSAL01000024    RVE52239.1    KZ150113    PZC73302.1    JTDY01002247    KOB71806.1    NWSH01005605    PCG64100.1    KZ150197    PZC72319.1    RSAL01000003    RVE54733.1    NWSH01005160    PCG64390.1    NEVH01017475    NEVH01002684    NEVH01001351    PNF24176.1    PNF41738.1    PNF42927.1    NEVH01026393    PNF14286.1    NEVH01021985    PNF18924.1    NEVH01026401    NEVH01025126    NEVH01020854    NEVH01013255    NEVH01000629    PNF14193.1    PNF16176.1    PNF21085.1    PNF29260.1    PNF43158.1    NEVH01009069    PNF34004.1    NEVH01026090    PNF14815.1    NWSH01008683    PCG62453.1    PZC73303.1    RSAL01000132    RVE46376.1    NEVH01011876    PNF31583.1    GEGO01007089    JAR88315.1    RSAL01000097    RVE47692.1    JU326601    AFE70357.1    AHZZ02030739    CM001259    EHH27175.1    CM001282    EHH62949.1    AK057200    AK094816    AK289491    AC079203    AQIA01062119    CABD030095328    JSUE03037923    ABGA01233763    NDHI03003689    PNJ08370.1    AQIB01116437    AACZ04060380    GABC01006592    GABD01003812    GABE01001690    NBAG03000487    JAA04746.1    JAA29288.1    JAA43049.1    PNI20010.1    GECU01037003    GECU01013756    JAS70703.1    JAS93950.1    GEGO01006047    JAR89357.1    CCAG010009903    GEBQ01012026    JAT27951.1    GEBQ01027849    JAT12128.1    KK120039    KFM77390.1    KK115494    KFM65244.1    GEDC01003168    JAS34130.1    NEVH01018384    PNF23441.1    GEDC01002971    JAS34327.1    GEBQ01017560    JAT22417.1    HAEI01002033    SBR78690.1    HAEH01008939    SBR85849.1   

Proteomes

UP000053240    UP000283053    UP000037510    UP000218220    UP000235965    UP000233220    + More
UP000233020    UP000008225    UP000028761    UP000009130    UP000233120    UP000233140    UP000233060    UP000005640    UP000233100    UP000001519    UP000233200    UP000233180    UP000006718    UP000001595    UP000029965    UP000002277    UP000233080    UP000092444    UP000054359    UP000079169   

PRIDE

Q96DM1   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2

Interpro

IPR029526   PGBD        + More
IPR032718   PGBD4_C_Znf-ribbon       
IPR018159   Spectrin/alpha-actinin       

ProteinModelPortal

A0A194RRT0   A0A3S2TBD2   A0A3S2PA36   A0A3S2NGQ2   A0A2H1V5F3   A0A3S2LRG0   + More
A0A2W1BDM1   A0A0L7L984   A0A2A4IY54   A0A2W1B9N8   A0A3S2TTE3   A0A2A4IYX3   A0A2J7Q6H1   A0A2J7PD69   A0A2J7PRG6   A0A2J7PIK3   A0A2J7QZK8   A0A2J7PER0   A0A2A4ITI3   A0A2W1BNR3   A0A3S2NWG9   A0A2J7QSN3   A0A147BD88   A0A3S2NSV7   A0A2K6S7R1   A0A2K5BXT0   F7FDY8   H9F6U8   A0A096NT85   G7MWA2   G7PAN9   A0A2K6ALX5   A0A2K5XAW3   A0A2K5KZS5   Q96DM1   A0A2K5UF88   G3QWT8   A0A2K6NHE6   A0A2K6JV20   A0A1D5R1S0   H2NMQ4   A0A0D9SEG0   K7DKZ9   A0A2K5HN84   A0A1B6H7X0   A0A147BEZ3   A0A1B0FFI5   A0A1B6LW93   A0A1B6KKZ3   A0A087UJ51   A0A087TJF5   A0A1B6E873   A0A3Q0JNJ9   A0A2J7Q4C7   A0A1B6E8U4   A0A1B6LFF4   A0A1A8PBD7   A0A1A8PXY9  

KEGG

101738125    no KO assigned | (RefSeq) uncharacterized LOC101738125

GO

GO:0016021  

Length:

546

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.19189

Exp number, first 60 AAs:

0.05902

Total prob of N-in:

0.00708

outside

1  -  546

 

 

Pi

202.536632

Theta

156.03146

Tajima's D

-0.943668

CLR

1.139381

CSRT

0.145992700364982

Interpretation

Uncertain