Gene

KWMTBOMO05547

Pre Gene Modal

BGIBMGA006601

Annotation

PREDICTED:_leucine-rich_repeat-containing_protein_70_[Papilio_machaon]

Location

Bomo_Chr10(-):4560823-4583967      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.385 Nuclear   Reliability : 1.442

CDS

ATGTGGCCTCGCTGGTTGTTATTATGCTTGGTGGTGCTATACGCGCGGCCAGTACACCCACAAGGCGCCCAGCAGTGCCCCGCTCCGAACACCATGACACCTTGCAGCTGCACGGTCAAGAAAAACGGCTTGGATATACTCTGCGAGTTCACTGAACAGCAACATATACAAAAGGCAATGAACACGCTGCGTTCGAAGCCAATGATTATATTTTATCTGAAGCTACGTCACAACAACCTGGCTAAGTTGCCCTCTTACATATTCCTGGGGCTCGATATACGTCATCTCACTGTTCACAACAGCAGCCTAGCGGTCATCGAGGATTCTTCACTAAGCTCCATCGGCAACAAGCTGACTCAGCTGGACGTCTCCCAGAATAGTCTGGCCACAATACCGACATCTTCGTTCACGCATCTCAACCACCTGCTCATACTGAACATGAATCATAACAAGGTGACCGCGGTACACAACAGAGCATTCGTCGGACTTGATACCCTAGAGATACTGACTCTGTATGAAAATAGGATTTCGGTAGTCGATGGCGAGGCTTTCAAAGGATTGGAAAAGAAGCTTAAGCGATTAAATCTTGGAGGCAATGAATTGACGGCGGTCCCGCAAAAAGCGCTGGCTCTTCTCGAGAATTTGAAAAAACTTGAAATGCAAGAAAATCGGATTACTTCTATTTCAGAAGGGGACTTTGCAGGGTTACGTAACCTAGATTCTTTAGGCCTAGCTCATAACCAGCTTCGCGAAGTTCCGGCTCAAGTGTTTTCGCACCTTACGTTTTTGAACTCACTGGAGTTGGAGGGAAACCTGATTCAACGTATTGACGAGAAAGCCTTTGCTGGACTTGAAGAAAATCTGCAATACTTACGTCTTGGCGACAACCGCCTACATGAGATCCCCTCTGAAGCACTGCGTCCTCTGCATCGTCTCCGCCATCTGGACCTTCGATCCAACAACATAACATACATCAGTGAAGATGCCTTCACTGGCTACGGAGACTCCATCACGTTCCTCAACATGCAAAAGAATATGATTCATCAGCTGCCAACAATGGGCTTCGATAATCTGAACTCCCTGGAAACACTGAACCTGCAAAACAATAAACTACAGCATATTCCTGAGGAAATAATGGAGCCGATACTCGATACATTACGAGTCGTGGATATAATGGATAATCCTCTGATCTGTGACTGTGAGCTGGCTTGGTACGAAGCTTGGTTGGCCGGACTCCGCGACCGCGACGATGAGATGATGCAGAAGAAACGGACAGTATGTACCATGCTCAACGAGCATCGCGAATACAGCGTCTCTAAAATGCCGCTCGAAAAGATGAGCTGCAAAAGAAAACCCACCTACGGCCGAACATCGGGTGCGGATACACTCAAAAAATTCCGGGCCACCATGATCTGTAAGCTAGTTTTACCGTAA

Protein

MWPRWLLLCLVVLYARPVHPQGAQQCPAPNTMTPCSCTVKKNGLDILCEFTEQQHIQKAMNTLRSKPMIIFYLKLRHNNLAKLPSYIFLGLDIRHLTVHNSSLAVIEDSSLSSIGNKLTQLDVSQNSLATIPTSSFTHLNHLLILNMNHNKVTAVHNRAFVGLDTLEILTLYENRISVVDGEAFKGLEKKLKRLNLGGNELTAVPQKALALLENLKKLEMQENRITSISEGDFAGLRNLDSLGLAHNQLREVPAQVFSHLTFLNSLELEGNLIQRIDEKAFAGLEENLQYLRLGDNRLHEIPSEALRPLHRLRHLDLRSNNITYISEDAFTGYGDSITFLNMQKNMIHQLPTMGFDNLNSLETLNLQNNKLQHIPEEIMEPILDTLRVVDIMDNPLICDCELAWYEAWLAGLRDRDDEMMQKKRTVCTMLNEHREYSVSKMPLEKMSCKRKPTYGRTSGADTLKKFRATMICKLVLP

Uniprot

A0A2A4K690   A0A212ES11   H9JAQ6   A0A194PEF0   A0A0L7LVM3   A0A194QMQ2   + More
A0A1B6LR65   A0A1B6GGD2   A0A1B6GL60   A0A1B6DK70   U4U2K4   N6UFH3   A0A139WCJ5   A0A1Y1LFZ3   A0A026X1V6   A0A224XNR4   E2ANM6   A0A151IZ20   A0A195AU89   A0A158P1H7   A0A195CU90   F4WZ82   A0A195F6N1   A0A151X782   A0A182TX63   A0A182KNV0   A0A182X5F2   Q7Q5V6   A0A182I193   A0A182VFR2   A0A1B0DQ62   A0A2J7PQ66   A0A182YQL6   E2BNY8   A0A084WL39   A0A1Q3FR24   B0WZL3   A0A1J1J072   W5JD69   A0A182QI75   A0A0K8T373   A0A182GNH2   T1DCS2   A0A182GRX0   E0VHV4   A0A1S4FWD6   A0A2J7PQ75   A0A182FHZ3   Q16M66   A0A2M4BL91   A0A182PAY8   A0A336KPL9   A0A182NK04   T1HRS8   A0A0L7R9Y1   U5EQI6   A0A0C9Q806   A0A182WLN6   A0A154PG02   W8BH76   A0A310SJL2   A0A034V0W4   V9IDJ2   A0A2A3ECP6   A0A0A1XR59   A0A0N0U4Y2   A0A2S2PE15   J9JKE1   A0A088AD75   A0A2H8TVJ7   A0A2S2QW30   A0A0L0CR85   B4MPQ1   A0A1I8MQU4   A0A1I8MQT4   A0A0J9R7Q2   A0A0J9TVW8   A0A1W4VZE3   A0A1W4WB39   B4P278   B3N9A2   A0A0Q5WCH7   A0A0R1DTD0   B4J829   E1NZE3   A0A1I8PZ34   A0A1I8PZ04   Q7K2X5   B3MGD0   D0Z756   Q290X6   A0A3B0JVR9   A0A3B0J246   B4KQ79   A0A0Q9X8N7   A0A0Q9WFH4   B4LJK8   A0A0M4EBR5   B4GB29  

Pubmed

22118469    19121390    26354079    26227816    23537049    18362917    + More
19820115    28004739    24508170    30249741    20798317    21347285    21719571    20966253    12364791    14747013    17210077    25244985    24438588    20920257    23761445    26483478    24330624    20566863    17510324    24495485    25348373    25830018    26108605    17994087    25315136    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    18057021   

EMBL

NWSH01000113    PCG79424.1    AGBW02012900    OWR44241.1    BABH01008578    BABH01008579    + More
BABH01008580    BABH01008581    KQ459606    KPI91647.1    JTDY01000040    KOB79231.1    KQ461198    KPJ06240.1    GEBQ01013840    GEBQ01004518    JAT26137.1    JAT35459.1    GECZ01008265    JAS61504.1    GECZ01006592    JAS63177.1    GEDC01011205    GEDC01003484    GEDC01003003    JAS26093.1    JAS33814.1    JAS34295.1    KB631301    KB631558    ERL84230.1    ERL84383.1    APGK01023871    KB740523    ENN80480.1    KQ971366    KYB25652.1    GEZM01056961    GEZM01056960    JAV72544.1    KK107024    QOIP01000004    EZA62290.1    RLU24053.1    GFTR01006765    JAW09661.1    GL441256    EFN64972.1    KQ980735    KYN13747.1    KQ976741    KYM75590.1    ADTU01006633    ADTU01006634    KQ977305    KYN03704.1    GL888470    EGI60471.1    KQ981756    KYN36118.1    KQ982450    KYQ56232.1    AAAB01008960    EAA11472.3    APCN01000045    AJVK01008455    AJVK01008456    NEVH01022640    PNF18482.1    GL449511    EFN82580.1    ATLV01024179    KE525350    KFB50933.1    GFDL01005041    JAV30004.1    DS232210    EDS37527.1    CVRI01000066    CRL05923.1    ADMH02001577    ETN62006.1    AXCN02000495    GBRD01006206    JAG59615.1    JXUM01000501    JXUM01000502    JXUM01000503    JXUM01000504    JXUM01000505    JXUM01000506    GALA01001727    JAA93125.1    JXUM01083457    JXUM01083458    JXUM01083459    JXUM01083460    JXUM01083461    KQ563378    KXJ73948.1    DS235172    EEB12960.1    PNF18483.1    CH477878    EAT35420.1    GGFJ01004580    MBW53721.1    UFQS01000669    UFQT01000669    SSX05978.1    SSX26335.1    ACPB03008601    ACPB03008602    ACPB03008603    KQ414620    KOC67675.1    GANO01004268    JAB55603.1    GBYB01010293    GBYB01010294    JAG80060.1    JAG80061.1    KQ434889    KZC10364.1    GAMC01017563    GAMC01017562    GAMC01017561    JAB88994.1    KQ764772    OAD54386.1    GAKP01022044    GAKP01022041    JAC36911.1    JR040449    JR040450    AEY59139.1    AEY59140.1    KZ288285    PBC29498.1    GBXI01002265    GBXI01000518    JAD12027.1    JAD13774.1    KQ435811    KOX72921.1    GGMR01015072    MBY27691.1    ABLF02028970    ABLF02028971    ABLF02028973    GFXV01006490    MBW18295.1    GGMS01012766    MBY81969.1    JRES01000023    KNC34848.1    CH963849    EDW74090.1    CM002911    KMY92166.1    KMY92167.1    KMY92165.1    CM000157    EDW89279.1    CH954177    EDV59589.1    KQS70900.1    KRJ98345.1    CH916367    EDW02259.1    BT125692    ADO16258.1    AE013599    AY060601    AAF59148.2    AAL28149.1    CH902619    EDV37833.2    BT100303    ACZ48702.1    AFH07953.1    CM000071    EAL25236.3    OUUW01000001    SPP75168.1    SPP75167.1    CH933808    EDW09207.2    KRG04525.1    KRG04526.1    CH940648    KRF80079.1    EDW61576.2    KRF80080.1    CP012524    ALC41027.1    CH479181    EDW32131.1   

Proteomes

UP000218220    UP000007151    UP000005204    UP000053268    UP000037510    UP000053240    + More
UP000030742    UP000019118    UP000007266    UP000053097    UP000279307    UP000000311    UP000078492    UP000078540    UP000005205    UP000078542    UP000007755    UP000078541    UP000075809    UP000075902    UP000075882    UP000076407    UP000007062    UP000075840    UP000075903    UP000092462    UP000235965    UP000076408    UP000008237    UP000030765    UP000002320    UP000183832    UP000000673    UP000075886    UP000069940    UP000249989    UP000009046    UP000069272    UP000008820    UP000075885    UP000075884    UP000015103    UP000053825    UP000075920    UP000076502    UP000242457    UP000053105    UP000007819    UP000005203    UP000037069    UP000007798    UP000095301    UP000192221    UP000002282    UP000008711    UP000001070    UP000095300    UP000000803    UP000007801    UP000001819    UP000268350    UP000009192    UP000008792    UP000092553    UP000008744   

PRIDE

H9JAQ6    Q7K2X5    D0Z756   

Pfam

PF13855   LRR_8        + More
PF00560   LRR_1
PF02893   GRAM
PF13306   LRR_5

Interpro

IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR000483   Cys-rich_flank_reg_C       
IPR011993   PH-like_dom_sf       
IPR004182   GRAM       
IPR036014   TCB1D9/TCB1D9B_PH-GRAM1       
IPR026906   LRR_5       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF57667   SSF57667       

Gene 3D

3.80.10.10     2.30.29.30    

CDD

cd13351  PH-GRAM1_TCB1D9_TCB1D9B

ProteinModelPortal

A0A2A4K690   A0A212ES11   H9JAQ6   A0A194PEF0   A0A0L7LVM3   A0A194QMQ2   + More
A0A1B6LR65   A0A1B6GGD2   A0A1B6GL60   A0A1B6DK70   U4U2K4   N6UFH3   A0A139WCJ5   A0A1Y1LFZ3   A0A026X1V6   A0A224XNR4   E2ANM6   A0A151IZ20   A0A195AU89   A0A158P1H7   A0A195CU90   F4WZ82   A0A195F6N1   A0A151X782   A0A182TX63   A0A182KNV0   A0A182X5F2   Q7Q5V6   A0A182I193   A0A182VFR2   A0A1B0DQ62   A0A2J7PQ66   A0A182YQL6   E2BNY8   A0A084WL39   A0A1Q3FR24   B0WZL3   A0A1J1J072   W5JD69   A0A182QI75   A0A0K8T373   A0A182GNH2   T1DCS2   A0A182GRX0   E0VHV4   A0A1S4FWD6   A0A2J7PQ75   A0A182FHZ3   Q16M66   A0A2M4BL91   A0A182PAY8   A0A336KPL9   A0A182NK04   T1HRS8   A0A0L7R9Y1   U5EQI6   A0A0C9Q806   A0A182WLN6   A0A154PG02   W8BH76   A0A310SJL2   A0A034V0W4   V9IDJ2   A0A2A3ECP6   A0A0A1XR59   A0A0N0U4Y2   A0A2S2PE15   J9JKE1   A0A088AD75   A0A2H8TVJ7   A0A2S2QW30   A0A0L0CR85   B4MPQ1   A0A1I8MQU4   A0A1I8MQT4   A0A0J9R7Q2   A0A0J9TVW8   A0A1W4VZE3   A0A1W4WB39   B4P278   B3N9A2   A0A0Q5WCH7   A0A0R1DTD0   B4J829   E1NZE3   A0A1I8PZ34   A0A1I8PZ04   Q7K2X5   B3MGD0   D0Z756   Q290X6   A0A3B0JVR9   A0A3B0J246   B4KQ79   A0A0Q9X8N7   A0A0Q9WFH4   B4LJK8   A0A0M4EBR5   B4GB29  

PDB

3KJ4     E-value=6.24273e-19,     Score=232

KEGG

101738626    no KO assigned | (RefSeq) leucine-rich repeat-containing protein let-4

GO

GO:0016021   GO:0002755   GO:0046696   GO:0001875   GO:0050707   GO:0034142   GO:0050829   GO:0045087   GO:0004888   GO:0042116   GO:0003676   GO:0005515   GO:0005507   GO:0004535   GO:0046872   GO:0006974   GO:0001664   GO:0005525   GO:0007264   GO:0003824  

SignalP

Position:   1 - 20,         Likelihood:  0.997628

 

 

Length:

477

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01605

Exp number, first 60 AAs:

0.0142

Total prob of N-in:

0.00134

outside

1  -  477

 

 

Pi

24.678855

Theta

182.500888

Tajima's D

0.459254

CLR

1.420809

CSRT

0.501824908754562

Interpretation

Uncertain