SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05546
Pre Gene Modal
BGIBMGA006740
Annotation
PREDICTED:_laccase-4-like_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.122
 

Sequence

CDS
ATGGAGCCGCCGAAAACCGCGATGGAAGTGCACGGTGTGCCAGTGCAGAAACCAAATTACATGCTCATGTCCTTACAAAGGATATTAGTGCTTGTTATTATATTCGCATGCGTTCTAATTGTAGTGCGCTACACACCGATGCCTGAAGAATACTTTGAAAACTGCGACAGAGAATGTCATGAATTAGACTGGCCAATGATTTGTCGTGTGAAACTAGTAATCGAAGTCTACAAAACTCTTAGCAAATCTTGTGGCAATTGTACTGATAAAGATGGAACAGGAGAGTGTCCGTCCACGTGTATATCCGCAGACGGACGGGAGCGAGGTGTTCTCACAGCGAACCGTGCTTTACCAGCACCAACGCTTCACGTCTGTCACAACGATATCCTCGTAGTCGATGTAGTGCATAGAGCTCCGGCTCATGCGTTATCTATCCATTGGCGCGGTCAACCACAAAAGGAAACGCCCTTTATGGACGGAGCCCCAATGTTGACACAATGCCCGCAACCTGCATATACTACATTTCAATATAAATTCCGAGCATCTGCAGTTGGAACACATATGTACCACGCTCACTCCGCAGCGGACGCTGCTGATGGTCTTGCAGGCGCCCTTGTGGTCCGACAATCTCCTCGTCAAGACCCATTGAGGAAACTGTACGACACTGATGCTTCGGAGCATACAATATATGTTTCCGAATGGGGTCATTCAATGGGACCCTTGGCGGGTATGATGTCGAATGTTCCTAAAGCTGAATCGCTTCTCATAAACGGGAAAGGAAAGACCGTTGAAAATATAGATGCACCGTTAACTAAGTTTTCCGTTGAATATGGAAAGCGGTATAGATTTAGATTAGCATACGGTGGAGGATCGAAGAGTTGTCCTATTCAATTTTCTATTGAAAAACACGTTCTCACTCTGGTCGCTTTAGATGGAAATGGAATAGAACCGGAATATGTTAATTCTATTGAATTAGGTCGAGGGGAGCGTGTTGATTTTATACTAGAAGCCAAAAGAGCTCCGGGCGTATACAAAATGTCCGTTGTGGCGCATCCGGATTGTCAAGATAATTTAAAAGGTGTAGCTGAGTTGGTTTATACAAATAAAGATAAAGCAGTGTTAATTAAAGACATTGACGAGTTAAATAAAGTTTATCGTAAGTTTAGCACAGTGATTAGTGTGCAGTGTGAGGACGAAAGCGTCTTGTGTTTGACAGAGGCTCGTGGCTATGAGCAGATGCCCTCTGAACTGACAAAGACTCCCGACCGGACTCTCTATGTGCCTTTTAATTATTCCACAAGAAGAATATCAGCGAAGCGAGTCGAGAGTTGGGGTCAATCTGACGGTCATCGTTTCACATATCCGGCATCTCCACTGCTCACTCAAGGAGGCGACGTGGGACCCAACACTTTGTGTCCTGAAGGGCCCGGTGAGGGCGACGAATGCGTCCATGTTAAAAATATTCCATTGTATTCTACCGTGGAAATTGTTATGTTTGATCAAGGTGGCGAGTCGGACCACATTTTCCATCTGCACGGATACGGTTTCTACGTTACCGGAGTGAGGGAGTTTAACAGGAGTCTGAGTAAGGAAACAGTCATCAAAATGAACGAAGCGAACACGCTATTTATAAACAAGAATCTCATCAGACCCGTATTAAAAGACACTATCGTGATACCTAAATTCGGCGTAGTCGCGTTGCGGTTTAAGGCGGATAATCCGGGGTACTGGATGATGAGGGACGAAAGGTCGACCCACTGGACAAGAGGACTCGATTTCATATTAAAAGTGGGCGAACAAAGCGACTTAGTGCAGGCGCCTCCTGATTTTCCGAAATGTGGTTCATATGTCGGCCCCGAGTATTTTCTAATTTAA
Protein
MEPPKTAMEVHGVPVQKPNYMLMSLQRILVLVIIFACVLIVVRYTPMPEEYFENCDRECHELDWPMICRVKLVIEVYKTLSKSCGNCTDKDGTGECPSTCISADGRERGVLTANRALPAPTLHVCHNDILVVDVVHRAPAHALSIHWRGQPQKETPFMDGAPMLTQCPQPAYTTFQYKFRASAVGTHMYHAHSAADAADGLAGALVVRQSPRQDPLRKLYDTDASEHTIYVSEWGHSMGPLAGMMSNVPKAESLLINGKGKTVENIDAPLTKFSVEYGKRYRFRLAYGGGSKSCPIQFSIEKHVLTLVALDGNGIEPEYVNSIELGRGERVDFILEAKRAPGVYKMSVVAHPDCQDNLKGVAELVYTNKDKAVLIKDIDELNKVYRKFSTVISVQCEDESVLCLTEARGYEQMPSELTKTPDRTLYVPFNYSTRRISAKRVESWGQSDGHRFTYPASPLLTQGGDVGPNTLCPEGPGEGDECVHVKNIPLYSTVEIVMFDQGGESDHIFHLHGYGFYVTGVREFNRSLSKETVIKMNEANTLFINKNLIRPVLKDTIVIPKFGVVALRFKADNPGYWMMRDERSTHWTRGLDFILKVGEQSDLVQAPPDFPKCGSYVGPEYFLI

Summary

Similarity
Belongs to the multicopper oxidase family.
EMBL
NWSH01000001    PCG81125.1    KQ459606    KPI91648.1    RSAL01000015    RVE53119.1    + More
AGBW02009807    OWR49884.1    KQ461198    KPJ06241.1    BABH01008575    ODYU01011676    SOQ57572.1    JTDY01002063    KOB72200.1    KQ981756    KYN36115.1    KQ977305    KYN03708.1    KQ982450    KYQ56228.1    KQ980735    KYN13750.1    ADTU01006647    ADTU01006648    GL449511    EFN82577.1    QOIP01000004    RLU24060.1    KQ435755    KOX76045.1    KQ414620    KOC67679.1    KQ434889    KZC10367.1    GL441256    EFN64969.1    KQ759903    OAD62006.1    KK853076    KDR11754.1    KR086791    AKN21384.1    KQ976741    KYM75588.1    KU764432    AQS60678.1    GEZM01056202    JAV72788.1    LJIG01000043    KRT86897.1    GBHO01030380    GBHO01030378    JAG13224.1    JAG13226.1    GDHC01017173    JAQ01456.1    KQ971366    EFA12828.2    LC202058    BBC20926.1    GECZ01021538    JAS48231.1    KB631557    ERL84380.1    KK107024    EZA62294.1    GEDC01005594    JAS31704.1    KJ500311    AHZ13215.1    GDHC01003310    JAQ15319.1    DS235068    EEB11257.1    APGK01023870    KB740523    ENN80477.1    KB631857    ERL86762.1    GBYB01006133    JAG75900.1    NEVH01009082    PNF33797.1    GECU01008876    GECU01008309    JAS98830.1    JAS99397.1    ABLF02034333    GGMR01002055    MBY14674.1    GGMS01010717    MBY79920.1    GL761667    EFZ22956.1    JH431603    PYGN01001776    PSN32868.1    KK852824    KDR15437.1    GECZ01019605    JAS50164.1    GDIP01238862    JAI84539.1    GDIP01238861    JAI84540.1    KDR11749.1    GDIP01033644    JAM70071.1    RSAL01000212    RVE44181.1    AXCM01012146    GL732541    EFX81873.1    NWSH01000053    PCG80165.1    KZ150026    PZC74805.1    GDIP01140785    JAL62929.1    KP318028    AKH61981.1    PNF33770.1    GECU01017108    JAS90598.1    GDIP01097790    JAM05925.1    GDIP01141440    JAL62274.1    AB514130    BAJ06132.1    GDIQ01165221    JAK86504.1    GDIQ01087496    JAN07241.1    BK006377    DAA06286.1    GDIP01210175    GDIP01175564    GDIP01147144    GDIP01146474    GDIP01134236    GDIP01131744    GDIP01130384    GDIP01051957    JAL69478.1    GDIQ01013899    JAN80838.1    GDIP01025604    JAM78111.1    GDIP01126090    JAL77624.1    GDIP01241175    GDIP01232184    GDIP01230924    GDIP01222080    GDIP01220930    GDIP01167326    GDIP01165924    GDIP01147145    GDIP01138874    GDIP01134235    GDIP01131743    GDIP01120831    GDIP01074054    GDIP01064047    GDIP01044646    JAL71971.1    JXJN01023535    GDIP01241174    GDIP01232183    GDIP01230923    GDIP01222079    GDIP01220931    GDIP01185570    GDIP01134237    GDIP01124992    GDIP01064046    LRGB01000915    JAL69477.1    KZS15189.1    GDIP01165125    JAJ58277.1    GDIQ01071949    JAN22788.1    KY073340    ATI08981.1    AY135185    AAN17506.1    LRGB01002985    KZS05241.1    GDIP01237081    JAI86320.1    GDIP01176778    JAJ46624.1    GDIP01232520    GDIP01232519    JAI90881.1    NEVH01022640    PNF18422.1    GDIP01232518    JAI90883.1    GDIP01147385    JAJ76017.1    PNF18421.1    GDIP01227818    JAI95583.1    GDIP01241462    GDIP01241461    JAI81940.1    GDIP01239973    GDIP01239972    GDIP01044793    JAI83429.1    GDIP01147386    JAJ76016.1    GDIP01041092    JAM62623.1   
Pfam
PF00394   Cu-oxidase        + More
PF07732   Cu-oxidase_3
PF07731   Cu-oxidase_2
Interpro
IPR001117   Cu-oxidase        + More
IPR011706   Cu-oxidase_2       
IPR008972   Cupredoxin       
IPR011707   Cu-oxidase_3       
IPR033138   Cu_oxidase_CS       
IPR002355   Cu_oxidase_Cu_BS       
SUPFAM
SSF49503   SSF49503       
Gene 3D
PDB
4JHV     E-value=1.89059e-34,     Score=367

Ontologies

Topology

Length:
624
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
20.61174
Exp number, first 60 AAs:
20.59079
Total prob of N-in:
0.98195
POSSIBLE N-term signal
sequence
inside
1  -  19
TMhelix
20  -  42
outside
43  -  624
 
 

Population Genetic Test Statistics

Pi
189.361905
Theta
165.188278
Tajima's D
0.088945
CLR
0.550375
CSRT
0.39718014099295
Interpretation
Uncertain
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