Gene

KWMTBOMO05543

Annotation

PREDICTED:_uncharacterized_protein_K02A2.6-like_[Plutella_xylostella]

Location

Bomo_Chr10(+):4462528-4466280      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.102

CDS

ATGCTTCGAGATAGACTGGTGTGCGGCATGAGCGATCATAAGCTTCAGTATGAGTTGTTGAAGAGAGAACAACTTCGTTATGAAGATGTTGTACATGCTATGGTATCATCGGAGAGCGCCGGAAAGGATGTGCGCATGATTCAAAGCACGAGCACGGACACATTTGGTATGACACAGGGTGAGGTAGTGACGTCACATGCCGAGCCTATGGAAGTGAATGTCGTCAATTTCAAACGTAATTTTCGACTGTGCTATCGCTGCGGAGACCGACACGGTGGAGAGTGTCGATATATTAATTCAATTTGTCATTATTGTAAGAAAAAAGGGCATATTGAAAAGATATGTACATCTAAGAAAAACAACAAAAGAAAGAGCATTAACTATACAGATGATGAATTTCAAGCGCAATTAAATGGTATTTACAACGTGAACACAAATAGTCGGCGCGTACCAGCTTACGAAGTAAAGGTGTTACTAGATGGTGTACCAGTGATTATGGAAGTGGACTCGGGTGCTGCCTACTCTCTTGTGAATTTACATACGTGGCGTCGAATACACTCTCACATGCCTTTGGAACCTTTGATGAATAAATTATGTACTTGGAATAATTCTGCAGTCAGAGTGGACGGTCAAGCCACAGTGCTAGTACAATATAAAGACATTAAATGTTCTCTTAAGGTTATTGTGGCTCAGGGTTCGGGTCCAAATTTGTTAGGACGTAATTGGTTTGAAGCTTTAGGAATATGTGTAAATGTAAATACTATTAAAGAAATTAATGTGACTGAGGTAATTTTGAATAAACATTATGAAGTTTTCAGAGCCGGACTCGGTACTTATCGTGGGGAACCTGTAAATATTCACCTGAAACCAGGTGCAGTGCCAAGATTTATGAAAGCGCGTCCTGTACCGTACGCTATCAAAGAAAGAGTTGAAAAAGAAATCAATCGCCTGGAAGCTGAAGGAGTACTCCGCCCTGTAACTTTTTCTGAGTGGGCTACTCCAGTTGTTCCTATCGTAAAAAAGAATGGAGACGTACGCCTTTGTGGAGATTATCGTAGTACAGTTAATCAGGCTACAGAGTCTGATACGTATCCAATGCCCACCGCAAGTGAAGTGTTTGCCACCATCTCTGGAGGTAATATTTTCTCAACGTTAGATCTTGATCGTGCTTATACTCAGGTGGTTGTCACAGACGACACAGCACGTCTCCTAACCTTAAACACATGTAAAGGCCTTTACACGGTACATCGGCTAGCTTTCGGCGTCAAGGCTTCCCCGGGTATATTCCAACGTTTAATGACAGCATTACTAGCTGGCATATCTGGTGTTGCAGTGCTAATCGATGACATCATCGTTAGTGGTAGAACAGCGCAGGAGATGACACAACGCTTAGATGCAGTCCTGGATCGCATTGAAAAAGCGGGATTACGACTCAATAAAGGCAAATGTAAGTTTGCAAGGAAACAAGTAGAATTTTTAGGTTTCATAATTGATGCTGAGGGTATACACCCTGCACCGAGTAAAATAGAATCAATATTGAAAACTCCCAAACCTAAGAACGTACAAGAGCTTCAAGCTTTTCTTGGCCTTTATAATTTTTATGAGAGATTTATTCCTCACAAAGCCACCATACTTGAACCTTTACATAGATTGCTAGACAAAGCACATAAGTGGCAGTGGTCAGAACGGGAACAGAAAAGTTTCGAGGTAGCAAAACGTTTGTTGTCCTCAGAGTTAACCTTAGCTCATTATGATCTTGAAAAACCTTTGATACTTACCTGTGATAGTTCAGATTACGGTGTAGGTGCAGTTTTGTCACATGTCATGAGTGACCGACAGGAACGACCTGTTGCTATGGGGTCCAGGACACTTCACATGCACGAACGGCGCTATTCGCAGCTAGATAAAGAAGCGACTGCAATAATGTTTGGAATAAATAAATTTCAGAACTATCTCATGGGACGGTCATTTACTATTGTCACGGATCACAAACCTTTGTTAGGTATATTTGATCCAAGAAAGCCCATTCCTAATATGTTGTCACCACGTCTTACAAGAATAGCATTAGTACTTACTTCACATAATTATGATATTATTTATAAACCGGGAAAATGCATAGGACATGCAGATGGGTTGAGTCGTTGGCCACAACCTGTATCAGAACAACCTGAAGAACAGCTTCAGGACATATTGCTACTGGCCGAAACACCAGACGAGTTTCCAATAGATGTTGCTCAAATAGCAAATGCTACCAAACGAGACTCAGTTTTGTCTCGAGTACGGCATCATATACTTTCCGGATGGCCAGCTAAGATAAATGATGAGTCGCTACGTCCATACTGGCTTCACCGAAATGAATTTTCCTTGAATGAAGACTGCATTCTAATAGGCAATCGTGTAATAATACCACCATCGTTTCGGCAGCCAGTTTTAGATTGTTTGCATAAAACTCATAGTGGCATCGTTCAAACTAAAGCGATTGCTCGTAGCTACGTCTGGTGGCCACAAATGAATAAGGATATTGAAAAGTTGGTAAAGAACTGTAATCGCTGTTTGGAAAATCGACATATGCCCCCTAGAACAACTTATGAATGGATAACTCCTACCAAACCTTGGTCTCGTATTAATGTAGATTTTGCGGGACCATTCCAAAATAAAATATTCCTGATTATAGTTGACGCGTATTCGCGATGGCCAGAAGTATTCATTGTTAACAATATGACTTCGTCGACCGTTGTTAAACACCTTCGAACAATATTTGCGACACACGGATTGTGTGAGGTATTGGTGTCTGACAATGGAACACCTTTTGTATCTGAAGAAACGAGAAAATTTCTAGAGTCTAACAAAATTAGACATATTACAACGGCGCCACATCATCCGTCTACTAACGGACTGGCAGAAAGAATGGTTCAAACAGTCAAGGACAAGTTACGGAAGATGGACGGTATCTCTTGGGATATAAAACTTCCCAATATATTATTAGGACTTCGCACAATTCCATGTGCAACAACAAATAAAAGTCCATGTGAATTATTGATGAACAGGCGTTTGCGCACCTTGCTTGATACACTCCATCCAGACAATCTCCAAACGTGTAAGAGAAATGAACAGATTGAAAGAAATGGCAACAAAAAAATTAGACACACTGATGTGGGGCAGAAAGTGATGTACAGGAACTTTGGAAATGGATCCCGTTGGTTACCAGGAACGGTAGTTTACAGGAATGGGCCAGGAAACTATCAAGTAGAAACTGGTGATGGAACTGTGGTGAATAGACATATAGATCAATTACTTAAAAAAGAAACAGATTCTGGACAGGAAACTGCAGAAAGAGGGAAGGAATCGGAATTGGATTGTGAGGCAGTGAATGTTGAGGAACAAGAAGATATGGAAGACATTTCTAGTAGTTTGGAGGAACAGGAAATTATAGAGATACCGAGTCCGGATAAATGGGCAGAAATGTTAGGAATTCCTCCCGAACCAGAATCAGGATATTCTGGTGGTAAAATTCGTCACAAAAGTCACATACATCAGAGGTCACCTTATAGTAGATTTAACTATAATTACATTAATTAA

Protein

MLRDRLVCGMSDHKLQYELLKREQLRYEDVVHAMVSSESAGKDVRMIQSTSTDTFGMTQGEVVTSHAEPMEVNVVNFKRNFRLCYRCGDRHGGECRYINSICHYCKKKGHIEKICTSKKNNKRKSINYTDDEFQAQLNGIYNVNTNSRRVPAYEVKVLLDGVPVIMEVDSGAAYSLVNLHTWRRIHSHMPLEPLMNKLCTWNNSAVRVDGQATVLVQYKDIKCSLKVIVAQGSGPNLLGRNWFEALGICVNVNTIKEINVTEVILNKHYEVFRAGLGTYRGEPVNIHLKPGAVPRFMKARPVPYAIKERVEKEINRLEAEGVLRPVTFSEWATPVVPIVKKNGDVRLCGDYRSTVNQATESDTYPMPTASEVFATISGGNIFSTLDLDRAYTQVVVTDDTARLLTLNTCKGLYTVHRLAFGVKASPGIFQRLMTALLAGISGVAVLIDDIIVSGRTAQEMTQRLDAVLDRIEKAGLRLNKGKCKFARKQVEFLGFIIDAEGIHPAPSKIESILKTPKPKNVQELQAFLGLYNFYERFIPHKATILEPLHRLLDKAHKWQWSEREQKSFEVAKRLLSSELTLAHYDLEKPLILTCDSSDYGVGAVLSHVMSDRQERPVAMGSRTLHMHERRYSQLDKEATAIMFGINKFQNYLMGRSFTIVTDHKPLLGIFDPRKPIPNMLSPRLTRIALVLTSHNYDIIYKPGKCIGHADGLSRWPQPVSEQPEEQLQDILLLAETPDEFPIDVAQIANATKRDSVLSRVRHHILSGWPAKINDESLRPYWLHRNEFSLNEDCILIGNRVIIPPSFRQPVLDCLHKTHSGIVQTKAIARSYVWWPQMNKDIEKLVKNCNRCLENRHMPPRTTYEWITPTKPWSRINVDFAGPFQNKIFLIIVDAYSRWPEVFIVNNMTSSTVVKHLRTIFATHGLCEVLVSDNGTPFVSEETRKFLESNKIRHITTAPHHPSTNGLAERMVQTVKDKLRKMDGISWDIKLPNILLGLRTIPCATTNKSPCELLMNRRLRTLLDTLHPDNLQTCKRNEQIERNGNKKIRHTDVGQKVMYRNFGNGSRWLPGTVVYRNGPGNYQVETGDGTVVNRHIDQLLKKETDSGQETAERGKESELDCEAVNVEEQEDMEDISSSLEEQEIIEIPSPDKWAEMLGIPPEPESGYSGGKIRHKSHIHQRSPYSRFNYNYIN

Uniprot

A0A2R5LIR9   A0A0V1GSV8   A0A0V0RTT5   A0A0V1MIE6   A0A0V1BVI1   A0A0V1M0R9   + More
A0A3P8Q506   A0A0V0VH28   A0A0V0USW3   A0A0V1KNI7   A0A085LS29   A0A1A7WUZ7   A0A1A7YSF0   A0A0V0UEK4   A0A0V0T3M4   A0A085LTS7   A0A085LXT4   A0A085NGD5   A0A085LME0   A0A3P8VSE7   A0A1Y1MAK2   A0A085M8Q0   A0A085LJR8   A0A085LQ67   A0A085MQM1   A0A0V0TT39   A0A1Y1NHT7   A0A3P8NEQ7   A0A147BJE4   A0A0V1LU74   A0A3P8NV61   A0A3B3B4L9   A0A1X7TIE8   A0A1X7TH22   A0A147BJS0   A0A085LR60   A0A085M3U3   A0A085MGN2   A0A085N7K8   A0A085NC41   A0A085NBL6   A0A2I4C6V0   A2TGR5   A0A0V1CV78   A0A085LV84   A0A085MU81   A0A085MHF4   A0A131XQT5   A0A1X7VU64   A0A147BIP4   A0A085M9N6   A2TGR4   A0A0N5DLE4   A0A3Q1EQC9   A0A085N023   A0A085MTN6   A0A0V1ANH9   T2MJH3   A0A3P8QD94   A0A3P8NEP7   A0A3P8NHI5   A0A1S3KHX3   A0A0V0RGX3   A0A267F699   A0A267GR92   A0A0V1N1F5   A0A267EXJ4   A0A1E1XML3   A0A3B3H2N7   A0A131YR50   A0A1S3SSU6   A0A147ADQ5   A0A0J7KDI4   A0A3R7DF32   A0A1X7TWV5   A0A1Y1KZ05   A0A3P8RGT3   A0A0V0VH72   A0A147BJL5   A0A1S3J391   A0A293MR82   A0A2R2MK13   A0A1Y1KFM2   A0A090XCC9   A0A147BJV8   A0A1S3HLN2   A0A147BK15   A0A085MBS6   A0A1X7U623   A0A0V0US17   A0A131XQ90   A0A146XMZ2   A0A0V1A810   A0A146NT21   A0A1S3L075   A0A1A8QZH2   A0A147BIQ8   A0A267EVG4   A0A3B3TFN7  

Pubmed

24929829    24487278    28004739    29652888    29451363    17694394    + More
24065732    29209593    17554307    26830274    26383154    25970599    29240929   

EMBL

GGLE01005288    MBY09414.1    JYDP01000327    KRZ01162.1    JYDL01000080    KRX17894.1    + More
JYDO01000093    KRZ71620.1    JYDH01000010    KRY40903.1    JYDO01000377    KRZ65389.1    JYDN01000036    KRX62850.1    JYDN01000181    KRX54093.1    JYDW01000348    KRZ48953.1    KL363314    KFD47775.1    HADW01008367    SBP09767.1    HADX01010638    SBP32870.1    JYDJ01000011    KRX49884.1    JYDJ01000764    KRX33566.1    KL363295    KFD48373.1    KL363264    KFD49780.1    KL367504    KFD68531.1    KL363391    KFD46136.1    GEZM01036245    JAV82862.1    KL363215    KFD53596.1    KL363640    KFD45214.1    KL363340    KFD47113.1    KL367859    KFD59517.1    JYDJ01000151    KRX42156.1    GEZM01002003    JAV97411.1    GEGO01004533    JAR90871.1    JYDW01000004    KRZ62956.1    GEGO01004367    JAR91037.1    KL363326    KFD47456.1    KL363234    KFD51889.1    KL363194    KFD56378.1    KL367538    KFD65454.1    KL367519    KFD67037.1    KL367520    KFD66862.1    EF199622    ABM90393.1    JYDI01000102    KRY52595.1    KL363282    KFD48880.1    KL367649    KFD60777.1    KL363192    KFD56650.1    GEFM01006397    JAP69399.1    GEGO01004800    JAR90604.1    KL363212    KFD53932.1    EF199621    ABM90392.1    KL367587    KFD62819.1    KL367660    KFD60582.1    JYDH01000458    KRY26369.1    HAAD01006009    CDG72241.1    JYDL01000185    KRX13745.1    NIVC01001377    PAA68677.1    NIVC01000183    PAA88548.1    JYDO01000016    KRZ77842.1    NIVC01001575    PAA66240.1    GFAA01002959    JAU00476.1    GEDV01006828    JAP81729.1    GCES01009650    JAR76673.1    LBMM01009301    KMQ88234.1    NIRI01001153    RJW67559.1    GEZM01074359    JAV64586.1    KRX62859.1    GEGO01004421    JAR90983.1    GFWV01017841    MAA42569.1    GEZM01085032    JAV60302.1    GBIH01000761    JAC93949.1    GEGO01004331    JAR91073.1    GEGO01004729    JAR90675.1    KL363205    KFD54672.1    KRX54086.1    GEFM01006393    JAP69403.1    GCES01042893    JAR43430.1    JYDQ01000025    KRY20467.1    GCES01151725    JAQ34597.1    HAEH01013823    SBR98409.1    GEGO01004748    JAR90656.1    NIVC01001652    PAA65446.1   

Proteomes

UP000055024    UP000054630    UP000054843    UP000054776    UP000265100    UP000054681    + More
UP000054721    UP000055048    UP000265120    UP000261560    UP000007879    UP000192220    UP000054653    UP000046395    UP000257200    UP000087266    UP000215902    UP000001038    UP000036403    UP000085678    UP000265000    UP000054783    UP000261540   

Pfam

PF17919   RT_RNaseH_2        + More
PF17921   Integrase_H2C2
PF00665   rve
PF00078   RVT_1
PF00077   RVP
PF00098   zf-CCHC
PF17917   RT_RNaseH
PF07727   RVT_2
PF13976   gag_pre-integrs

Interpro

IPR001584   Integrase_cat-core        + More
IPR041577   RT_RNaseH_2       
IPR001878   Znf_CCHC       
IPR012337   RNaseH-like_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR018061   Retropepsins       
IPR036875   Znf_CCHC_sf       
IPR041373   RT_RNaseH       
IPR001995   Peptidase_A2_cat       
IPR009068   S15_NS1_RNA-bd       
IPR013103   RVT_2       
IPR025724   GAG-pre-integrase_dom       
IPR034128   K02A2.6-like       
IPR008936   Rho_GTPase_activation_prot       
IPR001969   Aspartic_peptidase_AS       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       
SSF57756   SSF57756       
SSF47060   SSF47060       
SSF48350   SSF48350       

Gene 3D

2.40.70.10     3.30.420.10    

CDD

cd05484  retropepsin_like_LTR_2

ProteinModelPortal

A0A2R5LIR9   A0A0V1GSV8   A0A0V0RTT5   A0A0V1MIE6   A0A0V1BVI1   A0A0V1M0R9   + More
A0A3P8Q506   A0A0V0VH28   A0A0V0USW3   A0A0V1KNI7   A0A085LS29   A0A1A7WUZ7   A0A1A7YSF0   A0A0V0UEK4   A0A0V0T3M4   A0A085LTS7   A0A085LXT4   A0A085NGD5   A0A085LME0   A0A3P8VSE7   A0A1Y1MAK2   A0A085M8Q0   A0A085LJR8   A0A085LQ67   A0A085MQM1   A0A0V0TT39   A0A1Y1NHT7   A0A3P8NEQ7   A0A147BJE4   A0A0V1LU74   A0A3P8NV61   A0A3B3B4L9   A0A1X7TIE8   A0A1X7TH22   A0A147BJS0   A0A085LR60   A0A085M3U3   A0A085MGN2   A0A085N7K8   A0A085NC41   A0A085NBL6   A0A2I4C6V0   A2TGR5   A0A0V1CV78   A0A085LV84   A0A085MU81   A0A085MHF4   A0A131XQT5   A0A1X7VU64   A0A147BIP4   A0A085M9N6   A2TGR4   A0A0N5DLE4   A0A3Q1EQC9   A0A085N023   A0A085MTN6   A0A0V1ANH9   T2MJH3   A0A3P8QD94   A0A3P8NEP7   A0A3P8NHI5   A0A1S3KHX3   A0A0V0RGX3   A0A267F699   A0A267GR92   A0A0V1N1F5   A0A267EXJ4   A0A1E1XML3   A0A3B3H2N7   A0A131YR50   A0A1S3SSU6   A0A147ADQ5   A0A0J7KDI4   A0A3R7DF32   A0A1X7TWV5   A0A1Y1KZ05   A0A3P8RGT3   A0A0V0VH72   A0A147BJL5   A0A1S3J391   A0A293MR82   A0A2R2MK13   A0A1Y1KFM2   A0A090XCC9   A0A147BJV8   A0A1S3HLN2   A0A147BK15   A0A085MBS6   A0A1X7U623   A0A0V0US17   A0A131XQ90   A0A146XMZ2   A0A0V1A810   A0A146NT21   A0A1S3L075   A0A1A8QZH2   A0A147BIQ8   A0A267EVG4   A0A3B3TFN7  

PDB

4OL8     E-value=5.14564e-54,     Score=538

KEGG

NA   

GO

GO:0008270   GO:0003676   GO:0015074   GO:0004190   GO:0007165   GO:0016874   GO:0016021   GO:0046872   GO:0006974   GO:0001664   GO:0005525   GO:0007264   GO:0003824  

Length:

1192

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0487000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00160

outside

1  -  1192

 

 

Pi

374.645988

Theta

221.637517

Tajima's D

2.079585

CLR

10.833305

CSRT

0.892405379731013

Interpretation

Uncertain