Silkworm Genome Informatics Database

Gene

KWMTBOMO05540

Pre Gene Modal

BGIBMGA005783

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Bombyx_mori]

Location

Bomo_Chr10(-):4381506-4385257 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.422

CDS

ATGCAGTTAAGTCTTGGAGATGAAAACGTGGAAGTGGAAACTTCTCCAGGCCCATCTGGAATTCCACAACGGCCTTCATTGACAGAGCAATTGAAAGTCGCCAAGGTGGCGAGGCTTTTGGATAAAAAGCATGAGAATTTGCTGTCTGCGGACCAAAAAAAGGAGCTGGCCAGGCTGCGCGATGGCAAGCAAGTGGGCAATTTTAAAATGCCAGATGCTCCAGAACCACAAAGAGGAAGAGGAAAGGGAAAGGGGAAGGGCAAAGGAAGGGGCAGTGAAGACTCGCGGATGTGGAGGCCATGCCCACTTTTACCTGGGGTACCAACTGTCCCTCCTCCACGTGTACGTCAGTCGTGGGAATTGCAACAGCAACGCCCGATTGATATCACCGCGGAGCAGGAGGGTGAGGATGATGACATCGAAAGCTATTTTCTTCCAGATATCACCGAGGATGAGGAGATGCGTCCTCCCCTCCTCGAGGATGAGGAGGCCGTTCCTTCTGCAGGGACCCCACCTCAAGCGAAGAAACGCAAGATCCAATTTTCGCCCTCGATGGGGATCATCCAGGCTACTGCATTGCCTCAAAATATCGTGCCAGCAGAGATAGAACTCCTGGGGTTTACACCTTATATCGATATAAATATGGAGCGTGACTTCATAGAGCCTGGCGAAGGCAGCGAAGTAGATGAAGGTGATTCGGCGAATATGGTCGGTATGATCGATATTTCTTTGAAACCAAGACGAATCGATGATTTTCCGATGGACTTAGACAGTATTGCTGAACATGAGGTAGTTGAGGTGATACAGGAGCTGGACAATGCTGCCGACGAAGTCCTTCGGAACGTGGTAGGACCGGAAACCGATCTGCTTCATTTTGACTGGCGAGGCGAGCCGGAAAATTTTGAGTCTGTCAGGGAAGCATTTACTGTGCCATCTACTGGACCAACGTTTGATAACGCCGATTTAATTCCCTTAGATGTTTTTTTCAAGATTTGGGATGCAGATATTATTGCTTACATCGTGCGCGAAACCAACCGCTACGGTGCTGAGCTAATAAGGTCGACCATTCCATCCAAGCCAAATTCTAGATTAAGCCGTTGGAAAGACGTCACCAGTGACGAAATCCTACGGTTTTTAGCAGTTTTAATGTTACAGTCACTAGTTATAGATTATGTGGAGCGCGAATATTGGTATGCCGTGATTGAAGAACTCCAAATAGGCAATTTTAAAGAAATAATGACTTATAACCGTTTCATCGTCATCAAACGTTGTCTCCATTTTATAGACAATGCCACTTTGCCCGTGCCGCCTACCAAACTCGATAAAATCATCCCCATCATAGAGCACCTAAACAAAAAATTTAAGTCTTTATACGTACTAGAACAAAATATAGCAATTGACGAGTCACTCCTTCTTTGGAAGGGGCGCCTCTCATTTGCGCAAAAAATTGCTACAAAAAGAGCTCGAGTAGGTATAAAGTCTTACGAGTTATGTGAATCCAGGACTGGATATTTATGGCAGATGGAGGTCTACACGGGCAAAGGGCACGCACATGTGGTACAAGACGGGGAGCCGGAAGAGCGCGGGCAAGAGTCTGACGAGCCGGAGAGTGCCACGGCCCAGATTGTGCTGAACTTAACGAGATCACTTTTTGATAAAGGCCATACATTAATAATGGACAATTTTTATAATGCGCCACTTTTGTCTCGGATCCTAAAAGTTCAGCACAAGACTGATTCGATGGGTACTCTACGACTTAACAGAGAGTTTGTCCCCGAAGCTCTTAAAAAAAAAACAAAAAAAAACATGAAGGAGGGCGAGGTGGCATTCAGCACAACCAAAGACCTCAGTGTGGTTGTGTGGATGGACAAAAATATTGTGGCAATGATTTCTTCTTTCCATCCCATAGAAGTCGGCGGCATTGAAAAATACGGTTATTACCGGTACAAACCGCAAGTTGTTCTTGATTATAATTTCTCAATGGGCGGCATCGACCACAAAGATCAAATGCTGTCTGCCTATCCCATTGAGAGATCACGTAACATAATCTGGTACAAAAAATTATTTCGCCGACTTTTAAATGTATCGATGCATAATGCTCTCGTGATGTTCAACCACAACCGCACTCACGCCCTTCGTCACCGTGAATTCCGCCTGCAGTTGGCAAAGCAACTGCTGCAAAGCAGCAGATCAGCAGCACCTTCCCGGTCTTTAGCACCGGCAGCACGACCAGAACCAGCGGCATGCATACGGGACATGCACTTGCCAGGAAAAAATACAAAAAAACAGCGCTGCAAGCTCTGCTACTCTGCCAAAGTGCAGCGCTCGACGGTGTGGCGGTGTACCACCTGCAATGTCAATCTGTGTATCGTAGGATGCTACACCGTATACCATATCAATCTAGCGCAAACGCCCGCCGTTTAG

Protein

MQLSLGDENVEVETSPGPSGIPQRPSLTEQLKVAKVARLLDKKHENLLSADQKKELARLRDGKQVGNFKMPDAPEPQRGRGKGKGKGKGRGSEDSRMWRPCPLLPGVPTVPPPRVRQSWELQQQRPIDITAEQEGEDDDIESYFLPDITEDEEMRPPLLEDEEAVPSAGTPPQAKKRKIQFSPSMGIIQATALPQNIVPAEIELLGFTPYIDINMERDFIEPGEGSEVDEGDSANMVGMIDISLKPRRIDDFPMDLDSIAEHEVVEVIQELDNAADEVLRNVVGPETDLLHFDWRGEPENFESVREAFTVPSTGPTFDNADLIPLDVFFKIWDADIIAYIVRETNRYGAELIRSTIPSKPNSRLSRWKDVTSDEILRFLAVLMLQSLVIDYVEREYWYAVIEELQIGNFKEIMTYNRFIVIKRCLHFIDNATLPVPPTKLDKIIPIIEHLNKKFKSLYVLEQNIAIDESLLLWKGRLSFAQKIATKRARVGIKSYELCESRTGYLWQMEVYTGKGHAHVVQDGEPEERGQESDEPESATAQIVLNLTRSLFDKGHTLIMDNFYNAPLLSRILKVQHKTDSMGTLRLNREFVPEALKKKTKKNMKEGEVAFSTTKDLSVVVWMDKNIVAMISSFHPIEVGGIEKYGYYRYKPQVVLDYNFSMGGIDHKDQMLSAYPIERSRNIIWYKKLFRRLLNVSMHNALVMFNHNRTHALRHREFRLQLAKQLLQSSRSAAPSRSLAPAARPEPAACIRDMHLPGKNTKKQRCKLCYSAKVQRSTVWRCTTCNVNLCIVGCYTVYHINLAQTPAV

Uniprot

A0A3S2TTE3 A0A2W1B9N8 A0A3S2LRG0 A0A2A4IY54 A0A2H1WWX9 A0A3S2TBD2 + More
A0A2A4JR95 A0A2A4ITI3 A0A3S2NSV7 A0A3S2NGQ2 A0A1B6GS29 A0A1Y1NAK0 A0A2J7PIT0

Pubmed

28756777 28004739

EMBL

RSAL01000003 RVE54733.1 KZ150197 PZC72319.1 RSAL01000024 RVE52239.1 + More
NWSH01005605 PCG64100.1 ODYU01011285 SOQ56924.1 RSAL01001012 RVE40990.1 NWSH01000726 PCG74565.1 NWSH01008683 PCG62453.1 RSAL01000097 RVE47692.1 RSAL01000045 RVE50637.1 GECZ01004548 JAS65221.1 GEZM01013350 GEZM01013349 GEZM01013347 GEZM01013346 GEZM01013345 GEZM01013342 JAV92637.1 NEVH01024959 PNF16251.1

Proteomes

UP000283053 UP000218220 UP000235965

Pfam

PF13843 DDE_Tnp_1_7 + More
PF13842 Tnp_zf-ribbon_2

Interpro

IPR018159   Spectrin/alpha-actinin        + More
IPR029526   PGBD
IPR032718   PGBD4_C_Znf-ribbon

ProteinModelPortal

A0A3S2TTE3 A0A2W1B9N8 A0A3S2LRG0 A0A2A4IY54 A0A2H1WWX9 A0A3S2TBD2 + More
A0A2A4JR95 A0A2A4ITI3 A0A3S2NSV7 A0A3S2NGQ2 A0A1B6GS29 A0A1Y1NAK0 A0A2J7PIT0

KEGG

101736034 no KO assigned | (RefSeq) piggyBac transposable element-derived protein 4-like

GO

Length:

807

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10596

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00010

outside

1 - 807

Pi

51.639708

Theta

3.159593

Tajima's D

0.130485

CLR

0.621772

CSRT

0.434878256087196

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree