Gene

KWMTBOMO05537

Pre Gene Modal

BGIBMGA006605

Annotation

PREDICTED:_UPF0545_protein_C22orf39_homolog_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr10(-):4367971-4370517      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.138

CDS

ATGACAGACAATAATAGGAGAAATGAAAAAAATGAATCGGAAATCCATAAAGAGTCTATTAATACATCCAATACTACAGAAAGTCAATTAGAGGATAAGTGGATGATAAGGAATTGTGACATATATGAAGATGAATATGACGAATGCACAAGTTTCAGAGCTAGATTCCATCAGTACTTCATATTTGGTGAGACATTAGATTGTAACCAATGGAAAAAAGATTATGATAATTGTTGTAAATGGGAATCGAAAAAAGATGTTAAAGCTGCTGAAGCACTTATAAATAGCGAAAAAACAAGACGACTAGAAAGATTAAAAGGACACTACAACAACAGCATATGGAAGAAACGCAGTGCACCACCAGCTAACTGGGATAAGCCATTACCAGAATGGATGTCAAAAAGAGATGAGAACACATACCTTGCGTTAAAAGCTAAAGAATTCAGAGAAGGAAACGTGAAAGAAGAAAAAAGTTTTTGTAGCATTATGTGA

Protein

MTDNNRRNEKNESEIHKESINTSNTTESQLEDKWMIRNCDIYEDEYDECTSFRARFHQYFIFGETLDCNQWKKDYDNCCKWESKKDVKAAEALINSEKTRRLERLKGHYNNSIWKKRSAPPANWDKPLPEWMSKRDENTYLALKAKEFREGNVKEEKSFCSIM

Cofactor

Mg(2+)

Similarity

Belongs to the aldehyde dehydrogenase family.
Belongs to the PP2C family.

Uniprot

H9JAR0   A0A2A4K9Y6   A0A194PG35   A0A194QL07   S4PT01   A0A2H1W1R1   + More
A0A1E1WCH5   A0A212EY64   A0A3S2NZM8   A0A0L7L5F8   W8AQX5   A0A1W4W3T2   A0A1I8M0Q2   A0A0L0C2T2   A0A1B0BR54   A0A1A9Y6B2   A0A1B0FKG7   A0A1I8Q5X7   A0A1A9VX74   A0A1A9ZP69   A0A0C9RC14   A0A034WPJ6   A0A0J7K8I9   B3MJ39   D6X2H5   A0A067QUI1   A0A195DMK9   A0A0K8W9M4   A0A158P1Y7   A0A0K8TR64   A0A1A9WK27   A0A195FKD5   A0A087ZQ23   A0A084VIE1   A0A182IPG0   A0A0M4EFL3   A0A1B6F593   B4KNJ4   A0A182FUS6   A0A2M3ZCX1   A0A1Y1NCH6   B4NMH7   Q293A2   E2AHG5   A0A1B6I5V6   A0A182HGX3   A0A2M4B023   B4GC66   A0A2M4AZV2   A0NGT8   A0A151IKI5   A0A2M4C1Y5   B4LJZ9   A0A182M142   B4J6I5   T1DNJ3   B3NB44   A0A182PC94   A0A182TWB6   A0A182VBR9   A0A2M4C239   A0A3B0J0H3   A0A2M4C1Z7   A0A2A3EG49   A0A1W4WED3   A0A1B0CKZ6   A0A170XTF1   A0A1L8DD00   U5EGX4   A0A195AW93   B4QDA7   B4HPW6   A0A336K5Q7   A0A0P4WPV0   W5JRI0   A0A069DP87   A0A151WT37   A0A0V0G9J7   A0A182YJC8   Q177D2   A0A2J7RBD3   A0A1W4V1K1   A0A023EG02   A0A026WAP9   A0A232ERP5   A0A2S2QKF1   A0A182WEI8   K7IXD8   B0W338   U4UJA7   A0A182N2G6   A0A224Y0S6   N6TCE0   A0A023G732   G3MSG2   A0A1Q3FAD6   Q4QPU3   A0A1J1ISM5   A0A2H8TWT4   A0A023G132  

Pubmed

19121390    26354079    23622113    22118469    26227816    24495485    + More
25315136    26108605    25348373    17994087    18362917    19820115    24845553    21347285    26369729    24438588    28004739    15632085    20798317    12364791    22936249    20920257    23761445    26334808    25244985    17510324    24945155    26483478    24508170    30249741    28648823    20075255    23537049    22216098    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01008558    NWSH01000001    PCG81105.1    KQ459606    KPI91664.1    KQ461198    + More
KPJ06258.1    GAIX01012898    JAA79662.1    ODYU01005735    SOQ46886.1    GDQN01006376    JAT84678.1    AGBW02011611    OWR46436.1    RSAL01000081    RVE48595.1    JTDY01002870    KOB70566.1    GAMC01019628    GAMC01019622    GAMC01019618    GAMC01019612    JAB86933.1    JRES01000975    KNC26571.1    JXJN01018908    CCAG010009561    GBYB01005790    JAG75557.1    GAKP01001431    JAC57521.1    LBMM01011578    KMQ86753.1    CH902619    EDV38133.1    KQ971372    EFA09858.1    KK853247    KDR09384.1    KQ980724    KYN14130.1    GDHF01004421    JAI47893.1    ADTU01006915    GDAI01000985    JAI16618.1    KQ981523    KYN40459.1    ATLV01013353    KE524854    KFB37735.1    CP012524    ALC42164.1    GECZ01024409    JAS45360.1    CH933808    EDW08953.1    GGFM01005645    MBW26396.1    GEZM01011966    JAV93327.1    CH964282    EDW85566.1    CM000071    EAL24709.1    GL439539    EFN67120.1    GECU01025421    JAS82285.1    APCN01002367    GGFK01013001    MBW46322.1    CH479181    EDW31384.1    GGFK01013002    MBW46323.1    AAAB01008986    EAU75885.2    KQ977199    KYN04986.1    GGFJ01010195    MBW59336.1    CH940648    EDW61653.1    AXCM01001816    CH916367    EDW01986.1    GAMD01002815    JAA98775.1    CH954177    EDV59809.1    GGFJ01010259    MBW59400.1    OUUW01000001    SPP74175.1    GGFJ01010196    MBW59337.1    KZ288254    PBC30717.1    AJWK01016803    GEMB01004058    JAR99203.1    GFDF01009748    JAV04336.1    GANO01003261    JAB56610.1    KQ976731    KYM76305.1    CM000362    CM002911    EDX05894.1    KMY91760.1    CH480816    EDW46635.1    UFQS01000091    UFQT01000091    SSW99182.1    SSX19564.1    GDRN01072735    JAI63510.1    ADMH02000317    ETN67002.1    GBGD01003393    JAC85496.1    KQ982763    KYQ51014.1    GECL01001539    JAP04585.1    CH477378    EAT42260.1    NEVH01005906    PNF38147.1    JXUM01048844    GAPW01005326    KQ561579    JAC08272.1    KXJ78108.1    KK107293    QOIP01000005    EZA53162.1    RLU22966.1    NNAY01002581    OXU21002.1    GGMS01009014    MBY78217.1    AAZX01000012    DS231830    EDS30746.1    KB632328    ERL92528.1    GFTR01002397    JAW14029.1    APGK01043279    KB741014    ENN75408.1    GBBM01005811    JAC29607.1    JO844813    AEO36430.1    GFDL01010501    JAV24544.1    AE013599    BT023673    KX532067    AAF57371.1    AAY85073.1    ANY27877.1    CVRI01000055    CRL01529.1    GFXV01006574    MBW18379.1    GBBL01000720    JAC26600.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000037510    UP000192223    UP000095301    UP000037069    UP000092460    UP000092443    UP000092444    UP000095300    UP000078200    UP000092445    UP000036403    UP000007801    UP000007266    UP000027135    UP000078492    UP000005205    UP000091820    UP000078541    UP000005203    UP000030765    UP000075880    UP000092553    UP000009192    UP000069272    UP000007798    UP000001819    UP000000311    UP000075840    UP000008744    UP000007062    UP000078542    UP000008792    UP000075883    UP000001070    UP000008711    UP000075885    UP000075902    UP000075903    UP000268350    UP000242457    UP000092461    UP000078540    UP000000304    UP000001292    UP000000673    UP000075809    UP000076408    UP000008820    UP000235965    UP000192221    UP000069940    UP000249989    UP000053097    UP000279307    UP000215335    UP000075920    UP000002358    UP000002320    UP000030742    UP000075884    UP000019118    UP000000803    UP000183832   

PRIDE

H9JAR0    Q4QPU3   

Pfam

PF11326   DUF3128        + More
PF00171   Aldedh
PF00481   PP2C
PF00096   zf-C2H2

Interpro

IPR021475   DUF3128        + More
IPR016161   Ald_DH/histidinol_DH       
IPR016163   Ald_DH_C       
IPR016162   Ald_DH_N       
IPR029510   Ald_DH_CS_GLU       
IPR015590   Aldehyde_DH_dom       
IPR015655   PP2C       
IPR036457   PPM-type_dom_sf       
IPR000222   PP2C_BS       
IPR001932   PPM-type_phosphatase_dom       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR012934   Znf_AD       

SUPFAM

SSF53720   SSF53720        + More
SSF81606   SSF81606       
SSF57667   SSF57667       

Gene 3D

3.40.309.10     3.40.605.10     3.60.40.10    

CDD

cd00143  PP2Cc

ProteinModelPortal

H9JAR0   A0A2A4K9Y6   A0A194PG35   A0A194QL07   S4PT01   A0A2H1W1R1   + More
A0A1E1WCH5   A0A212EY64   A0A3S2NZM8   A0A0L7L5F8   W8AQX5   A0A1W4W3T2   A0A1I8M0Q2   A0A0L0C2T2   A0A1B0BR54   A0A1A9Y6B2   A0A1B0FKG7   A0A1I8Q5X7   A0A1A9VX74   A0A1A9ZP69   A0A0C9RC14   A0A034WPJ6   A0A0J7K8I9   B3MJ39   D6X2H5   A0A067QUI1   A0A195DMK9   A0A0K8W9M4   A0A158P1Y7   A0A0K8TR64   A0A1A9WK27   A0A195FKD5   A0A087ZQ23   A0A084VIE1   A0A182IPG0   A0A0M4EFL3   A0A1B6F593   B4KNJ4   A0A182FUS6   A0A2M3ZCX1   A0A1Y1NCH6   B4NMH7   Q293A2   E2AHG5   A0A1B6I5V6   A0A182HGX3   A0A2M4B023   B4GC66   A0A2M4AZV2   A0NGT8   A0A151IKI5   A0A2M4C1Y5   B4LJZ9   A0A182M142   B4J6I5   T1DNJ3   B3NB44   A0A182PC94   A0A182TWB6   A0A182VBR9   A0A2M4C239   A0A3B0J0H3   A0A2M4C1Z7   A0A2A3EG49   A0A1W4WED3   A0A1B0CKZ6   A0A170XTF1   A0A1L8DD00   U5EGX4   A0A195AW93   B4QDA7   B4HPW6   A0A336K5Q7   A0A0P4WPV0   W5JRI0   A0A069DP87   A0A151WT37   A0A0V0G9J7   A0A182YJC8   Q177D2   A0A2J7RBD3   A0A1W4V1K1   A0A023EG02   A0A026WAP9   A0A232ERP5   A0A2S2QKF1   A0A182WEI8   K7IXD8   B0W338   U4UJA7   A0A182N2G6   A0A224Y0S6   N6TCE0   A0A023G732   G3MSG2   A0A1Q3FAD6   Q4QPU3   A0A1J1ISM5   A0A2H8TWT4   A0A023G132  

KEGG

105842222    no KO assigned | (RefSeq) UPF0545 protein C22orf39 homolog

GO

GO:0016620   GO:0004722   GO:0046872   GO:0003676   GO:0008270   GO:0005634  

PANTHER

PTHR28052   PTHR13832  

Length:

163

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.72227

inside

1  -  163

 

 

Pi

224.266038

Theta

214.644966

Tajima's D

0.409064

CLR

0

CSRT

0.494675266236688

Interpretation

Uncertain