Gene

KWMTBOMO05529

Pre Gene Modal

BGIBMGA009412

Annotation

Transposable_element_P_transposase_[Papilio_machaon]

Location

Bomo_Chr10(+):4288468-4289812      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.791

CDS

ATGGCAAAGAAGCTTTCCAGGACTAAAGTTTTTCTTAAATACATAGATAAATTACCTGAACCTATAAATCTTTTTACAAAGATGCAATTAAAAAATGCATCTAAGCCTAGAGGGAGGAGATTTTCTCTAAATGAGAAAATTATGTCATTAACGATTCTAAAGCAGAGTCCGAAGGCATATAATTATTTAAGACAGATGTTTGTTTTACCATCAAAACGAAGCCTTCAGACTTTGCTTAGTTTATTTTCTGTCAAACCGGGTTTGAATCTACACATTTTAAAAGATTTACAATCTGCAGTGAGGCTAATGCCTGACGAGAAAAGAATTGTGAATCTAATGTTTGATGAAATATCACTTTGTCCTGGAGTGACCTATGATCCTGATATAGATGCAGTGATAGGATTTGAGGATATGGGATCTAATAGTAGGAATAAAACTCTGGCTGACCATGCACTTGTATTTATGATTAAGAGTGTCAAAAGTAAATGCAAACAACCCATTTGTTTTACTTTTTGTAAAAGTTCAACAAAAGCTATACACCTAAAAAACCTCATAAAAAATATTGTGCTAGAATTACAAAACATTGGTTTTATTGTTATTACAGTTATTTGCGATCAAGCCAGGACAAATGTCAACGCACTAAAGAACTTACATCAGGATACAAGGGAGAAATATTTGAAGGAAGGACATGGAGATTACATAGAAAAAGCCATTGAAATTGGCGGAAAAAAAATATTTCCTCTATTTGATCCACCACATTTATTGAAAGGTGTGAGAAATAATTTACTGATCAAAGATGCTTTATTTGTGCAGGATGGTGTCATGAAGCGAGCAAAATGGGATCATATTAGAATGTTGTTGGATGTGGATGATGGTGATGACGAAATTAGATTAGTCAATAAACTGACGGAAGCACATGTTATTAAAGAAAAGATCCCAAAAATGAAAGTGAAATTTGCTGCACAAATATTCAGTCAAAGAGTCTCATCAGCTATGAGATTCCTTGCAAGTGAGTGTTGTATATGA

Protein

MAKKLSRTKVFLKYIDKLPEPINLFTKMQLKNASKPRGRRFSLNEKIMSLTILKQSPKAYNYLRQMFVLPSKRSLQTLLSLFSVKPGLNLHILKDLQSAVRLMPDEKRIVNLMFDEISLCPGVTYDPDIDAVIGFEDMGSNSRNKTLADHALVFMIKSVKSKCKQPICFTFCKSSTKAIHLKNLIKNIVLELQNIGFIVITVICDQARTNVNALKNLHQDTREKYLKEGHGDYIEKAIEIGGKKIFPLFDPPHLLKGVRNNLLIKDALFVQDGVMKRAKWDHIRMLLDVDDGDDEIRLVNKLTEAHVIKEKIPKMKVKFAAQIFSQRVSSAMRFLASECCI

Uniprot

H9JIR1   A0A194QQL0   A0A0N1IC55   A0A2H1VJ77   F8SL48   J9LEP6   + More
J9M4P5   J9LY75   J9M961   J9LX62   A0A2A4JPP6   A0A2S2NC74   X1XC48   A0A0L7K5T4   J9M897   J9KEF2   X1XB84   J9KSA4   X1WQI7   A0A2S2P628   J9L1W2   X1XTB8   A0A2A4JZ58   A0A2A4JYS8   A0A2A4JY71   J9L6Z3   J9L7T1   J9KEP3   A0A2H8TYS2   A0A3S2KX83   J9M9N1   A0A2H1WTP2   A0A1Y1LY36   A0A3S2NSI9   A0A3S2LNK6   A0A1Y1JZB1   A0A0T6BCB1   A0A2S2P5T9   J9KX16   X1XAX4   A0A1Y1K6U6   A0A1Y1NI49   A0A139W9L5   J9M6Y7   A0A2S2N697   J9L5B6   A0A3S2NMS9   A0A2S2P9C5   A0A3S2LEZ0   J9KFX0   D6X0C0   A0A139WA73   J9LQD8   A0A1Y1KFJ5   A0A139W8P5   A0A1Y1KN14   A0A1Y1KI01   E9J9D7   A0A1Y1NHP2   A0A3S2L9N1   A0A1Y1NHU8   X1X0R9   A0A2S2P5E7   X1XMZ9   J9L862   A0A3S2LWA3   A0A2S2NFV1   J9KGM8   J9JKI6   E9IPY0   A0A2P8ZAL9   X1XJT3   J9KBW7   A0A3L8DM35   D2A039   A0A0T6BAH8   A0A0L7LB47   J9KCB1   J9LCP7   E2AAV3   A0A087U6X1   J9LCK1   A0A151IK27   A0A0J7LAG3   A0A2J7Q3U5   N6U1G5   D7EKX8   A0A3S2LWQ8  

Pubmed

19121390    26354079    21740565    26227816    28004739    18362917    + More
19820115    21282665    29403074    30249741    20798317    23537049   

EMBL

BABH01032897    KQ461175    KPJ07793.1    KQ461059    KPJ09927.1    ODYU01002680    + More
SOQ40482.1    HQ645847    AEH16631.1    ABLF02010326    ABLF02010327    ABLF02008684    ABLF02008686    ABLF02008687    ABLF02012658    ABLF02011948    ABLF02019656    ABLF02019662    ABLF02041486    NWSH01000959    PCG73380.1    GGMR01002126    MBY14745.1    ABLF02005638    ABLF02005639    JTDY01010331    KOB58244.1    ABLF02019592    ABLF02028679    ABLF02056730    ABLF02011758    ABLF02011759    ABLF02016553    ABLF02016555    ABLF02049531    ABLF02016627    GGMR01012308    MBY24927.1    ABLF02008338    ABLF02063349    NWSH01000363    PCG76968.1    PCG76969.1    PCG76967.1    ABLF02009647    ABLF02009778    ABLF02009779    ABLF02025341    ABLF02042390    ABLF02017696    ABLF02017444    GFXV01007611    MBW19416.1    RSAL01002057    RVE40596.1    ABLF02017692    ABLF02017693    ODYU01010582    SOQ55794.1    GEZM01045715    JAV77678.1    RSAL01000257    RVE43416.1    RSAL01000885    RVE41073.1    GEZM01101736    JAV52346.1    LJIG01001987    KRT84953.1    GGMR01011939    MBY24558.1    ABLF02023911    ABLF02054892    GEZM01090725    JAV57179.1    GEZM01001796    JAV97521.1    KQ972202    KYB24605.1    ABLF02034357    GGMR01000046    MBY12665.1    ABLF02007924    RSAL01005651    RVE39984.1    GGMR01012897    MBY25516.1    RSAL01000165    RVE45277.1    ABLF02014046    ABLF02014054    ABLF02014055    ABLF02015166    ABLF02066528    KQ971372    EFA10524.2    KQ971610    KYB24798.1    ABLF02008211    ABLF02008212    ABLF02008213    ABLF02011424    ABLF02042790    GEZM01085093    JAV60239.1    KQ973114    KXZ75664.1    GEZM01085095    JAV60237.1    GEZM01085094    JAV60238.1    GL769271    EFZ10565.1    GEZM01001982    JAV97423.1    RSAL01000375    RVE42104.1    GEZM01001983    JAV97421.1    ABLF02028653    ABLF02048521    ABLF02061836    ABLF02064667    GGMR01012070    MBY24689.1    ABLF02004413    ABLF02016452    ABLF02049812    ABLF02056148    ABLF02003317    RSAL01000161    RVE45426.1    GGMR01003037    MBY15656.1    ABLF02012220    ABLF02012222    ABLF02053218    ABLF02009332    GL764659    EFZ17305.1    PYGN01000122    PSN53542.1    ABLF02011697    ABLF02006763    QOIP01000006    RLU21441.1    KQ971338    EFA01749.1    LJIG01002596    KRT84344.1    JTDY01001960    KOB72446.1    ABLF02014670    ABLF02009194    GL438186    EFN69434.1    KK118493    KFM73110.1    ABLF02006951    KQ977258    KYN04620.1    LBMM01000128    KMR04828.1    NEVH01018428    PNF23254.1    APGK01046392    APGK01046393    KB741054    ENN74456.1    DS497781    EFA11724.1    RSAL01000151    RVE45747.1   

Proteomes

UP000005204    UP000053240    UP000007819    UP000218220    UP000037510    UP000283053    + More
UP000007266    UP000245037    UP000279307    UP000000311    UP000054359    UP000078542    UP000036403    UP000235965    UP000019118   

PRIDE

H9JIR1   

Pfam

PF12017   Tnp_P_element        + More
PF14727   PHTB1_N
PF14728   PHTB1_C
PF05485   THAP
PF14291   DUF4371
PF05699   Dimer_Tnp_hAT
PF03564   DUF1759
PF04727   ELMO_CED12
PF05585   DUF1758
PF00005   ABC_tran
PF00664   ABC_membrane
PF02037   SAP
PF10551   MULE
PF13359   DDE_Tnp_4

Interpro

IPR021896   Transposase_37        + More
IPR028073   PHTB1_N_dom       
IPR036322   WD40_repeat_dom_sf       
IPR026511   PTHB1       
IPR028074   PHTB1_C_dom       
IPR006612   THAP_Znf       
IPR038441   THAP_Znf_sf       
IPR025398   DUF4371       
IPR008906   HATC_C_dom       
IPR006816   ELMO_dom       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR008737   Peptidase_asp_put       
IPR005312   DUF1759       
IPR003593   AAA+_ATPase       
IPR011527   ABC1_TM_dom       
IPR027417   P-loop_NTPase       
IPR036640   ABC1_TM_sf       
IPR030244   Yor1       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR036361   SAP_dom_sf       
IPR012337   RNaseH-like_sf       
IPR003034   SAP_dom       
IPR023378   YheA/YmcA-like_dom_sf       
IPR018289   MULE_transposase_dom       
IPR013087   Znf_C2H2_type       
IPR006580   Znf_TTF       
IPR027806   HARBI1_dom       
IPR012677   Nucleotide-bd_a/b_plait_sf       

SUPFAM

SSF50978   SSF50978        + More
SSF57756   SSF57756       
SSF90123   SSF90123       
SSF52540   SSF52540       
SSF53098   SSF53098       
SSF158622   SSF158622       

Gene 3D

3.30.40.180     2.40.70.10     1.20.1560.10     1.10.720.30     3.30.70.330    

ProteinModelPortal

H9JIR1   A0A194QQL0   A0A0N1IC55   A0A2H1VJ77   F8SL48   J9LEP6   + More
J9M4P5   J9LY75   J9M961   J9LX62   A0A2A4JPP6   A0A2S2NC74   X1XC48   A0A0L7K5T4   J9M897   J9KEF2   X1XB84   J9KSA4   X1WQI7   A0A2S2P628   J9L1W2   X1XTB8   A0A2A4JZ58   A0A2A4JYS8   A0A2A4JY71   J9L6Z3   J9L7T1   J9KEP3   A0A2H8TYS2   A0A3S2KX83   J9M9N1   A0A2H1WTP2   A0A1Y1LY36   A0A3S2NSI9   A0A3S2LNK6   A0A1Y1JZB1   A0A0T6BCB1   A0A2S2P5T9   J9KX16   X1XAX4   A0A1Y1K6U6   A0A1Y1NI49   A0A139W9L5   J9M6Y7   A0A2S2N697   J9L5B6   A0A3S2NMS9   A0A2S2P9C5   A0A3S2LEZ0   J9KFX0   D6X0C0   A0A139WA73   J9LQD8   A0A1Y1KFJ5   A0A139W8P5   A0A1Y1KN14   A0A1Y1KI01   E9J9D7   A0A1Y1NHP2   A0A3S2L9N1   A0A1Y1NHU8   X1X0R9   A0A2S2P5E7   X1XMZ9   J9L862   A0A3S2LWA3   A0A2S2NFV1   J9KGM8   J9JKI6   E9IPY0   A0A2P8ZAL9   X1XJT3   J9KBW7   A0A3L8DM35   D2A039   A0A0T6BAH8   A0A0L7LB47   J9KCB1   J9LCP7   E2AAV3   A0A087U6X1   J9LCK1   A0A151IK27   A0A0J7LAG3   A0A2J7Q3U5   N6U1G5   D7EKX8   A0A3S2LWQ8  

KEGG

NA   

GO

GO:0004803   GO:0006313   GO:0034464   GO:0003677   GO:0003676   GO:0046983   GO:0016020   GO:0005524   GO:0042626   GO:0016021   GO:0055085   GO:0043565   GO:0005515   GO:0008270   GO:0031683   GO:0001664   GO:0005525   GO:0007264   GO:0003824  

PANTHER

PTHR20991   PTHR24223:SF271  

Length:

341

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.16405

Exp number, first 60 AAs:

0.00103

Total prob of N-in:

0.08597

outside

1  -  341

 

 

Pi

62.844962

Theta

70.939115

Tajima's D

-0.470205

CLR

0.008235

CSRT

0.250237488125594

Interpretation

Uncertain