Gene

KWMTBOMO05528

Pre Gene Modal

BGIBMGA006608

Annotation

PREDICTED:_peroxisomal_targeting_signal_1_receptor_[Amyelois_transitella]

Location

Bomo_Chr10(-):4278309-4280107      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.031 Nuclear   Reliability : 1.39

CDS

ATGTCTTTAAACAAACTTGTTGGTGGTGATTGTGGTGGAAACAATGCACTTGTACAATTTTCCAACATAGTGCGTCGAGATACAGGCAGTTTGCAGCACCGATCGGAGTCCGATAGATATGTTCAAGAGTTTTTATCGCAAAATCAAAATATACCTCAGTCTTTTAACATGAATGCATTACTTGGCAATTTACCTCAACACAACACAACAGTCACTAATTGTATACAAAGTCCGTCAACTTCTTTACAATCAAATTTGAATTGTATAGCTAGACCTTCTACATCTTATATGCCAGTACCTTCCATGCCAAGAACTATACCTTTTATGATGCATCAAACTAGAATTGGCCACTCTCAATCTCTTTCAATGGTTCCAAAAACTTTAGTGCAAAATTATGGAGCAATGACAACTTCTGACAATGATGTGCAAAAAAAGGCAACCGAGTATGTCAAAAGCAATCAGAATGATGATGAACTTGGTTACAATCAATTTATGTCATTTATGAAAAGAATTAGTTCTGGTGAAATGAAATTTGGTGAAGATATTGATAGAAACCAGGCAAAACTGTCTAAAGATGAAATTATTGATGAAATGGCAGAAAAATATAAAGATGAATGGGATAAACTCAGTGATGTCACTGATTATTGGAATTCAGAGGTTGCCCATGGTATTCCTAATGAATATAATTTCACTGAGGGAAATGTCATGTTAGAAAATAAAAGTGCATTGGAAATTGGAAAAGAAAAATTGAAATTAGGAGATATTCCAGGAGCTGTTCTTTGTTTTGAAGCAGCTTGTCAACAACAACCAGCCTCTGCAGAAGCTTGGTTTCTACTTGGAACAACTCAAGCTGAGAATGAACAAGATCCATTGGCAATAACTGCTCTTAAGAAATCACTAGAAATTGATCCAAGACAGCTAGAAGCATATATAACACTTGCAGCAGCTTATACCAACGAAAATATGCCTAAATATGCCTTTGTTTCATTATTGGATTGGTTAAAAGCAAGTCCTAAATACAGTGATCTGTTCCCTCATGATATTGATCCAAAGAAGTTAGACTTAAAAGAATTAGAAGCTCATGTTGTATCTTTGTATCTAAAAGTAGCACAGTTGAATCCTAACCAAATTGATGCTGATGTACAAAATGCCTTAGGTGTTGTTTTTAACATAAAACAAGAATATGACAAAGCAGTTGACTGTTTTAAAACTGCATTAATGGTAGCAAGTGATAATGCCAAGTTATGGAACAGGCTTGGAGCCACATTGGCTAACAGTGACCGCTCTGAAGAAGCAGTTGAGGCTTATCATGAAGCATTGAATTTAGAACCAGGATTTATCAGAGCAAGGTATAATGTTGGAATCACTTGTATGAATTTAGGAGCACACAGGCAAGCAGCTGAACATTTCTTAGTGGCATTGAATCAACAGTTCAAAGCCAAAACTTTGTATCCAAATGCACTAAATACTGATACAAGTTCATCAACAATCTGGACAACATTACGAATGGTTTGCTCATTTATGGGCGAACATGAAGCTGCAAAATTAGTGGATGACAAGAATCTTAATGCATTAAATAATTTCTTCAGTATAGAATAA

Protein

MSLNKLVGGDCGGNNALVQFSNIVRRDTGSLQHRSESDRYVQEFLSQNQNIPQSFNMNALLGNLPQHNTTVTNCIQSPSTSLQSNLNCIARPSTSYMPVPSMPRTIPFMMHQTRIGHSQSLSMVPKTLVQNYGAMTTSDNDVQKKATEYVKSNQNDDELGYNQFMSFMKRISSGEMKFGEDIDRNQAKLSKDEIIDEMAEKYKDEWDKLSDVTDYWNSEVAHGIPNEYNFTEGNVMLENKSALEIGKEKLKLGDIPGAVLCFEAACQQQPASAEAWFLLGTTQAENEQDPLAITALKKSLEIDPRQLEAYITLAAAYTNENMPKYAFVSLLDWLKASPKYSDLFPHDIDPKKLDLKELEAHVVSLYLKVAQLNPNQIDADVQNALGVVFNIKQEYDKAVDCFKTALMVASDNAKLWNRLGATLANSDRSEEAVEAYHEALNLEPGFIRARYNVGITCMNLGAHRQAAEHFLVALNQQFKAKTLYPNALNTDTSSSTIWTTLRMVCSFMGEHEAAKLVDDKNLNALNNFFSIE

Uniprot

H9JAR3   A0A212EYA5   S4PKP2   A0A2A4KB13   A0A2H1W1E6   A0A194PKN9   + More
A0A194QLL1   A0A0L7L5J8   A0A1Y1LNM6   A0A1Y1LIS8   A0A1B6M9E0   A0A1B6F3R8   A0A1B6HRX1   D6WZG5   A0A2J7QUW7   B3P9M8   A0A023F139   A0A0A9ZEW2   A0A158NQ53   A0A224X976   F4WMR6   U5EYI5   Q7KW08   A0A0M4EQV4   B4PY67   A0A0V0G725   A0A069DVX9   O46085   A0A0K8VZ82   B4I9J3   A0A0A1XJR8   A0A034WKL6   A0A1W4VTU8   A0A182FFL3   W5J4M5   A0A0L0BXV8   A0A3B0J802   A0A1S3JQ83   B4GXR9   A0A0J7NI34   Q29HG2   A0A1A9WVN9   T1PAF4   W8BKX3   A0A1W2WGU6   A0A1S3JP33   V4A8C1   A0A1A9USZ4   A0A2M4ASX5   A0A1B0BNU7   A0A210PXI9   A0A1A9YCP5   B4M7S2   A0A195CUB0   E0W1D4   A0A1I8PB98   A0A084WMT8   D3TMS0   B3MR28   A0A1S3JP41   A0A131YJF9   A0A195BJ34   A0A0C9QHD7   A0A182IX58   E9IN79   A0A1S3JPQ5   A0A224YXJ5   L7M6R7   A0A1B6DPQ0   G3MLT9   T1D3V2   A0A2B4SN24   A0A1L8DW88   T1ICX4   A0A182K4B7   A0A023GLJ9   A0A1B0D499   A0A293MYG2   L7M7L1   A0A2R5LN57   A0A131XNQ8   A0A026W2Y4   V5I174   R7TWX9   A0A1B0CY62   A0A293LRZ4   A0A2L2Y329   B7PLX3   A0A2L2Y3I9  

Pubmed

19121390    22118469    23622113    26354079    26227816    28004739    + More
18362917    19820115    17994087    25474469    25401762    26823975    21347285    21719571    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    26334808    25830018    25348373    20920257    23761445    26108605    15632085    25315136    24495485    23254933    28812685    20566863    24438588    20353571    26830274    21282665    28797301    25576852    22216098    24330624    24508170    30249741    25765539    26561354   

EMBL

BABH01008544    AGBW02011611    OWR46437.1    GAIX01004390    JAA88170.1    NWSH01000001    + More
PCG81104.1    ODYU01005735    SOQ46888.1    KQ459606    KPI91665.1    KQ461198    KPJ06259.1    JTDY01002870    KOB70569.1    GEZM01054600    GEZM01054599    JAV73535.1    GEZM01054601    GEZM01054598    JAV73533.1    GEBQ01007432    JAT32545.1    GECZ01032050    GECZ01031887    GECZ01024870    GECZ01023260    GECZ01022443    GECZ01021984    GECZ01021359    GECZ01009382    GECZ01006201    GECZ01004670    GECZ01004102    JAS37719.1    JAS37882.1    JAS44899.1    JAS46509.1    JAS47326.1    JAS47785.1    JAS48410.1    JAS60387.1    JAS63568.1    JAS65099.1    JAS65667.1    GECU01030306    GECU01022702    JAS77400.1    JAS85004.1    KQ971372    EFA09708.1    NEVH01010480    PNF32380.1    CH954183    EDV45524.1    GBBI01003976    JAC14736.1    GBHO01020622    GBHO01001676    GDHC01003220    GDHC01002417    JAG22982.1    JAG41928.1    JAQ15409.1    JAQ16212.1    ADTU01022963    GFTR01007519    JAW08907.1    GL888218    EGI64543.1    GANO01000278    JAB59593.1    AE014298    AL021106    AAN09062.1    CAA15937.1    CP012528    ALC48377.1    CM000162    EDX00940.1    GECL01002351    JAP03773.1    GBGD01000824    JAC88065.1    AY118757    AAF45676.2    AAM50617.1    GDHF01008153    JAI44161.1    CH480825    EDW43874.1    GBXI01003100    JAD11192.1    GAKP01004639    JAC54313.1    ADMH02002207    ETN57810.1    JRES01001169    KNC24826.1    OUUW01000003    SPP78424.1    CH479196    EDW27546.1    LBMM01004716    KMQ92150.1    CH379064    EAL31796.1    KA645130    AFP59759.1    GAMC01012629    GAMC01012627    JAB93926.1    KB202283    ESO91295.1    GGFK01010553    MBW43874.1    JXJN01017615    NEDP02005415    OWF41218.1    CH940653    EDW62839.1    KQ977279    KYN04245.1    DS235870    EEB19440.1    ATLV01024511    KE525352    KFB51532.1    CCAG010004550    EZ422722    ADD18998.1    CH902622    EDV34233.1    GEDV01009158    JAP79399.1    KQ976464    KYM84407.1    GBYB01002929    JAG72696.1    GL764290    EFZ17982.1    GFPF01010489    MAA21635.1    GACK01005043    JAA59991.1    GEDC01009644    JAS27654.1    JO842840    AEO34457.1    GALA01001228    JAA93624.1    LSMT01000058    PFX29922.1    GFDF01003374    JAV10710.1    ACPB03002946    GBBM01000672    JAC34746.1    AJVK01024229    AJVK01024230    GFWV01021164    MAA45892.1    GACK01004999    JAA60035.1    GGLE01006815    MBY10941.1    GEFM01006732    JAP69064.1    KK107455    QOIP01000010    EZA50440.1    RLU17669.1    GANP01003385    JAB81083.1    AMQN01011807    KB309117    ELT95480.1    AJWK01035490    GFWV01005891    MAA30621.1    IAAA01002960    LAA02561.1    ABJB010308571    DS744030    EEC07595.1    IAAA01002962    LAA02567.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053240    UP000037510    + More
UP000007266    UP000235965    UP000008711    UP000005205    UP000007755    UP000000803    UP000092553    UP000002282    UP000001292    UP000192221    UP000069272    UP000000673    UP000037069    UP000268350    UP000085678    UP000008744    UP000036403    UP000001819    UP000091820    UP000095301    UP000030746    UP000078200    UP000092460    UP000242188    UP000092443    UP000008792    UP000078542    UP000009046    UP000095300    UP000030765    UP000092444    UP000007801    UP000078540    UP000075880    UP000225706    UP000015103    UP000075881    UP000092462    UP000053097    UP000279307    UP000014760    UP000092461    UP000001555   

PRIDE

H9JAR3    Q7KW08    O46085    L7M6R7    L7M7L1   

Pfam

PF07719   TPR_2        + More
PF13181   TPR_8
PF13176   TPR_7
PF00108   Thiolase_N
PF00515   TPR_1

Interpro

IPR013026   TPR-contain_dom        + More
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
IPR024111   PTS1R_family       
IPR013105   TPR_2       
IPR024113   PTS1R       
IPR016039   Thiolase-like       
IPR020616   Thiolase_N       
IPR001440   TPR_1       

SUPFAM

SSF48452   SSF48452        + More
SSF53901   SSF53901       

Gene 3D

1.25.40.10     3.40.47.10    

ProteinModelPortal

H9JAR3   A0A212EYA5   S4PKP2   A0A2A4KB13   A0A2H1W1E6   A0A194PKN9   + More
A0A194QLL1   A0A0L7L5J8   A0A1Y1LNM6   A0A1Y1LIS8   A0A1B6M9E0   A0A1B6F3R8   A0A1B6HRX1   D6WZG5   A0A2J7QUW7   B3P9M8   A0A023F139   A0A0A9ZEW2   A0A158NQ53   A0A224X976   F4WMR6   U5EYI5   Q7KW08   A0A0M4EQV4   B4PY67   A0A0V0G725   A0A069DVX9   O46085   A0A0K8VZ82   B4I9J3   A0A0A1XJR8   A0A034WKL6   A0A1W4VTU8   A0A182FFL3   W5J4M5   A0A0L0BXV8   A0A3B0J802   A0A1S3JQ83   B4GXR9   A0A0J7NI34   Q29HG2   A0A1A9WVN9   T1PAF4   W8BKX3   A0A1W2WGU6   A0A1S3JP33   V4A8C1   A0A1A9USZ4   A0A2M4ASX5   A0A1B0BNU7   A0A210PXI9   A0A1A9YCP5   B4M7S2   A0A195CUB0   E0W1D4   A0A1I8PB98   A0A084WMT8   D3TMS0   B3MR28   A0A1S3JP41   A0A131YJF9   A0A195BJ34   A0A0C9QHD7   A0A182IX58   E9IN79   A0A1S3JPQ5   A0A224YXJ5   L7M6R7   A0A1B6DPQ0   G3MLT9   T1D3V2   A0A2B4SN24   A0A1L8DW88   T1ICX4   A0A182K4B7   A0A023GLJ9   A0A1B0D499   A0A293MYG2   L7M7L1   A0A2R5LN57   A0A131XNQ8   A0A026W2Y4   V5I174   R7TWX9   A0A1B0CY62   A0A293LRZ4   A0A2L2Y329   B7PLX3   A0A2L2Y3I9  

PDB

1FCH     E-value=1.35444e-71,     Score=687

KEGG

101746999    K13342 peroxin-5 | (RefSeq) peroxisomal targeting signal 1 receptor

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0016560   GO:0005829   GO:0005778   GO:0005052   GO:0007031   GO:0072347   GO:0005777   GO:0016021   GO:0016747   GO:0005515   GO:0043169   GO:0008270   GO:0005524   GO:0031683   GO:0001664   GO:0005525   GO:0007264   GO:0003824  

PANTHER

PTHR10130   PTHR10130:SF2  

Length:

532

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000830000000000002

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00055

outside

1  -  532

 

 

Pi

0.433526

Theta

5.847384

Tajima's D

-2.60381

CLR

6.047163

CSRT

4.99975001249937e-05

Interpretation

Possibly Positive selection