Gene

KWMTBOMO05525

Pre Gene Modal

BGIBMGA006610

Annotation

ADP-ribosylation_factor-like_6_interacting_protein_isoform_2_[Bombyx_mori]

Location

Bomo_Chr10(-):4227016-4228337      View in EpiBrowser

Full name

Reticulon-like protein      

Location in the cell

Nuclear   Reliability : 1.301

CDS

ATGGGAGAGAAATCTAGTACAGTCCAAGATCAGGAACAGCAAGTGCGAAAAGTAAAGCGAACTTTAGAAGGTTGGCGTGTAGCCTTACTCTCTCTGAAGTCTGTAATATTGTGGGAACAACAATGGCATCCTTGTGCCATTGTGGGCTCAATGACAATTATGTATCTTCTCATTTGGTTATTAGATCTCAATACTCTAGCTTCAATTGCTATTGACAACACGAGAAGACATTTGAAGAAATTTGTAGAAGCATTGTAA

Protein

MGEKSSTVQDQEQQVRKVKRTLEGWRVALLSLKSVILWEQQWHPCAIVGSMTIMYLLIWLLDLNTLASIAIDNTRRHLKKFVEAL

Uniprot

Q1HQA1   Q1HQA2   A0A2H1W1D2   A0A2A4KB18   A0A1E1WBT8   S4P164   + More
A0A0L7K3Y8   A0A067R2Y9   D6X2T5   E9FXV4   A0A1B6CAJ3   A0A1B6DIR1   A0A0T6B2N5   A0A2P8ZFT8   A0A293MM75   A0A293MC31   A0A162REJ1   A0A0P5DDX8   A0A0P5D0I4   A0A0N8C0S0   A0A026WRI7   A0A0P5JHZ6   A0A0P5JKN4   A0A2R5LJU6   A0A0P5MG85   E2BUS0   A0A0P5TVQ9   A0A0P5EE13   A0A0P5VH54   A0A0P6F289   A0A0P5V5T8   A0A0P4Y147   A0A0P5PIT5   A0A210QCN8   A0A0N8BWP1   A0A0P5YT04   A0A0P5NUI9   A0A151X628   E2ADL2   A0A0P5PCQ7   A0A195EUV3   A0A3B0KBV8   A0A1D1V0H3   A0A131XG86   A0A0P5GQ24   A0A0J7KWR9   A0A0P5GXX6   L7M732   A0A224YBN3   A0A224Y3V3   A0A0M9A1A8   E9IQT5   A0A1E1WXT8   A0A195B9B9   A0A158NPF1   F4X7Q2   A0A195E608   A0A131YJQ8   A0A2I9LNN6   A0A1B6H1Z3   A0A131YCB0   A0A088AH66   A0A1E1XRF3   A0A0P5R2M5   A0A0P5AZ89   A0A3B0JLM2   A0A3R7M2H7   A0A2A3ES92   G3MMM0   A0A1B0DRE8   A0A2T7PYR5   A0A3S1BRL4   A0A0B6ZX00   A0A195D0M1   A0A0L8GBU3   A0A1A9Z9W1   A0A1Z5KWM8   A0A1S3I8C5   A0A023GFV8   Q297K2   A0A1Y1LQL2   A0A0L7R9H4   B4G4A3   A0A336LPG8   D3TKU6   A0A1B0FJP5   A0A034WHA4   A0A0K8VKB8   A0A0K8RNN4  

Pubmed

23622113    26227816    24845553    18362917    19820115    21292972    + More
29403074    24508170    30249741    20798317    28812685    27649274    28049606    25576852    28797301    21282665    28503490    21347285    21719571    26830274    29248469    29209593    22216098    28528879    15632085    17994087    28004739    20353571    25348373   

EMBL

DQ443151    ABF51240.1    DQ443150    ABF51239.1    ODYU01005735    SOQ46891.1    + More
NWSH01000001    PCG81098.1    GDQN01006713    JAT84341.1    GAIX01009041    JAA83519.1    JTDY01011220    KOB57324.1    KK852946    KDR13427.1    KQ971372    EFA10290.2    GL732526    EFX88227.1    GEDC01026781    JAS10517.1    GEDC01011722    JAS25576.1    LJIG01016102    KRT81609.1    PYGN01000071    PSN55364.1    GFWV01022068    GFWV01022069    MAA46797.1    GFWV01011981    MAA36710.1    LRGB01000190    KZS20448.1    GDIP01157762    JAJ65640.1    GDIP01162907    JAJ60495.1    GDIQ01126099    JAL25627.1    KK107139    QOIP01000003    EZA57709.1    RLU24343.1    GDIQ01199727    JAK51998.1    GDIQ01198422    JAK53303.1    GGLE01005471    MBY09597.1    GDIQ01159886    JAK91839.1    GL450746    EFN80543.1    GDIP01138907    JAL64807.1    GDIP01143259    JAJ80143.1    GDIP01101660    JAM02055.1    GDIQ01179277    GDIQ01054830    JAN39907.1    GDIP01104563    JAL99151.1    GDIP01233991    JAI89410.1    GDIQ01127698    JAL24028.1    NEDP02004182    OWF46472.1    GDIQ01137531    JAL14195.1    GDIP01067264    JAM36451.1    GDIQ01137530    JAL14196.1    KQ982482    KYQ55836.1    GL438820    EFN68374.1    GDIQ01134597    JAL17129.1    KQ981965    KYN31664.1    OUUW01000007    SPP83166.1    BDGG01000002    GAU91948.1    GEFH01003219    JAP65362.1    GDIQ01237266    JAK14459.1    LBMM01002495    KMQ94743.1    GDIQ01236113    JAK15612.1    GACK01006110    JAA58924.1    GFPF01000258    MAA11404.1    GFPF01000259    MAA11405.1    KQ435794    KOX73853.1    GL764900    EFZ17094.1    GFAC01007602    JAT91586.1    KQ976542    KYM81131.1    ADTU01022427    GL888873    EGI57525.1    KQ979608    KYN20289.1    GEDV01009877    JAP78680.1    GFWZ01000010    MBW20000.1    GECZ01008996    GECZ01001070    JAS60773.1    JAS68699.1    GEDV01012389    JAP76168.1    GFAA01001825    JAU01610.1    GDIQ01106359    JAL45367.1    GDIP01192048    JAJ31354.1    SPP83167.1    QCYY01003082    ROT65465.1    KZ288189    PBC34663.1    JO843121    AEO34738.1    AJVK01009092    PZQS01000001    PVD38537.1    RQTK01000049    RUS89730.1    HACG01026258    CEK73123.1    KQ977004    KYN06422.1    KQ422765    KOF74309.1    GFJQ02007437    JAV99532.1    GBBM01002631    JAC32787.1    CM000070    EAL28203.1    GEZM01049440    JAV75964.1    KQ414626    KOC67522.1    CH479179    EDW25141.1    UFQT01000041    UFQT01000766    SSX18691.1    SSX27059.1    EZ422033    ADD18456.1    CCAG010004095    GAKP01003996    GAKP01003994    GAKP01003992    GAKP01003990    GAKP01003988    GAKP01003986    JAC54966.1    GDHF01013011    JAI39303.1    GADI01001609    JAA72199.1   

Proteomes

UP000218220    UP000037510    UP000027135    UP000007266    UP000000305    UP000245037    + More
UP000076858    UP000053097    UP000279307    UP000008237    UP000242188    UP000075809    UP000000311    UP000078541    UP000268350    UP000186922    UP000036403    UP000053105    UP000078540    UP000005205    UP000007755    UP000078492    UP000005203    UP000283509    UP000242457    UP000092462    UP000245119    UP000271974    UP000078542    UP000053454    UP000092445    UP000085678    UP000001819    UP000053825    UP000008744    UP000092444   

PRIDE

Q1HQA1    Q1HQA2   

Pfam

PF02453   Reticulon        + More
PF05648   PEX11

Interpro

IPR003388   Reticulon        + More
IPR008733   PEX11       

ProteinModelPortal

Q1HQA1   Q1HQA2   A0A2H1W1D2   A0A2A4KB18   A0A1E1WBT8   S4P164   + More
A0A0L7K3Y8   A0A067R2Y9   D6X2T5   E9FXV4   A0A1B6CAJ3   A0A1B6DIR1   A0A0T6B2N5   A0A2P8ZFT8   A0A293MM75   A0A293MC31   A0A162REJ1   A0A0P5DDX8   A0A0P5D0I4   A0A0N8C0S0   A0A026WRI7   A0A0P5JHZ6   A0A0P5JKN4   A0A2R5LJU6   A0A0P5MG85   E2BUS0   A0A0P5TVQ9   A0A0P5EE13   A0A0P5VH54   A0A0P6F289   A0A0P5V5T8   A0A0P4Y147   A0A0P5PIT5   A0A210QCN8   A0A0N8BWP1   A0A0P5YT04   A0A0P5NUI9   A0A151X628   E2ADL2   A0A0P5PCQ7   A0A195EUV3   A0A3B0KBV8   A0A1D1V0H3   A0A131XG86   A0A0P5GQ24   A0A0J7KWR9   A0A0P5GXX6   L7M732   A0A224YBN3   A0A224Y3V3   A0A0M9A1A8   E9IQT5   A0A1E1WXT8   A0A195B9B9   A0A158NPF1   F4X7Q2   A0A195E608   A0A131YJQ8   A0A2I9LNN6   A0A1B6H1Z3   A0A131YCB0   A0A088AH66   A0A1E1XRF3   A0A0P5R2M5   A0A0P5AZ89   A0A3B0JLM2   A0A3R7M2H7   A0A2A3ES92   G3MMM0   A0A1B0DRE8   A0A2T7PYR5   A0A3S1BRL4   A0A0B6ZX00   A0A195D0M1   A0A0L8GBU3   A0A1A9Z9W1   A0A1Z5KWM8   A0A1S3I8C5   A0A023GFV8   Q297K2   A0A1Y1LQL2   A0A0L7R9H4   B4G4A3   A0A336LPG8   D3TKU6   A0A1B0FJP5   A0A034WHA4   A0A0K8VKB8   A0A0K8RNN4  

KEGG

732887    no KO assigned | (RefSeq) ADP-ribosylation factor-like 6 interacting protein

GO

GO:0016021   GO:0016559   GO:0005779   GO:0005789  

Subcellular location

Endoplasmic reticulum membrane  

Length:

85

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.52497

Exp number, first 60 AAs:

14.25412

Total prob of N-in:

0.19625

POSSIBLE N-term signal

sequence

outside

1  -  46

TMhelix

47  -  69

inside

70  -  85

 

 

Pi

256.98116

Theta

195.980561

Tajima's D

0.956433

CLR

0

CSRT

0.655867206639668

Interpretation

Possibly Positive selection