SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05522  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006613
Annotation
PREDICTED:_protein_piccolo-like_[Bombyx_mori]
Location
Bomo_Chr10(-):4135032-4149512      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.381
 

Sequence

CDS
ATGGTAGATGACTTGAAGGCGGTGACGAAACGTTTGATAATCCAAGCCAAGAAACTAGGCTCAGCAGATAATATCTCAATAATCGTAGTGTTCCTGAAGGACCCTCGTGACATAGTCGCAGACAACTACCCGCCCATGGACCTTGGGCTGGACAACACATTGGCGAACGTAACGCCATTCGCCGTGGAGACGGAGTCATGCAGGCGGCAGGTCGATATTGCGTCGGGAGGCGATGCAGATGCGGAGGCCGAAACCGAGCCCGCTGACAACGGCGTCGATAACTCGGACAGCGACAGCGAGGACCTAGGCCCGGAGACCGCCGTCGACGTCGACGATATCGACGCCGAGAAAAATCCCGAGCCTGCGCCTCCTACGCCTCCCGCACACACAGTGGAAGAGGGCCACGTCGACGGTGCTCTAGTGGATAATGTAGCTGAGAGTGGCGAGGACTCTGAAGACGAGTGGAACTATTACAAAGGCGAAGGTGAACGCGAAGAGAAAAACGCCAGCGAAGAACCCGAGGAGCAACCGCGCTCAGAAACACCTTGTCAGGATAATTCAGGGTGGGAGAGTAGCTCTGTGGACATGAATAGTTCACCTCTGAACCCCGACGCACCTGTGTTTGTGCCGGGCAGTGCTGCGACTGACGTGTTGCTGGCTGAGTCTCCGCGTAAGCCATTACCAATGGACGATATTGATCTTCCTGACGTCACACAATTTCGAACGGAAGCTGTTGTTCGACCAGCTGAGCTTCTAGACTTGGACAACTGCGACCAACTTAATGGCCATCATAATGCAACAATAGAAGATACTATGAAAGAACAAATAAATGGTAATGATAATTGCAACATGGATAGTTTGGGCTTTGGATTCAATGTGGGCATTGAACCTGACAAAGTCAAGGACGTGGAACTCATACAGGACTTTGAAAGAATACAGAAAGATACAACTGATTTCTGTAATATTCAGGTATTTCAGACACATGCAGAAGCAAATCCATTTGCTTTGGAAGAAAATGATGAGCTTTTCGAAAGATTAAAAAATAAAGAAAGAGATCCCATGAGCATGAGTTTTTATCAAGAAAAAGATGATGACACATGTGAAAGGCTCACAAAGAATGATCTACAGGTTGATCTCAATGCTGTCCAGCCTCTGCCGGATAGTGATGATGAAGATTTACAACAGAATGGTATCTGTGAGAATTCTGAAGGAGATGACAAAGAAAATGTAAATCCAAAATTAGATGCCGATTTAACTGAGGCAGACATAAATAGTCAAGAACCAAACAATGACATAATGATTTTAAATGACAAAATGGGTGCTTTATCCAATAATGTTTGTAATTTTAATGAAGGAGATAATTTTGTGGATTATAACATAAACTCATCTGACAATTTACAATCATTCTCAAACATAGAATATGAAACAACTACACAAGAAACAGTGATACAAACAGACACACCAGAATCCCACAAATTAATGTTTGAGCAAATACCTGAAATCCCGGATGGGAAAAGTTCAGAATTAGGATTTACAAATGATGAATTACAAGACTGTTCTGACAGTGAAAAAGACTTAAGGGCAATCACACCATTAGATAAAAATAAAAATAATTCAGAAAATGAAATACATGATGATGAAATTCAAAGTGAAGTAGCAGAATCCTTCATCAAAGAATTGGAAGAAGATTTAGAAAAAGAACATGAACCAGAAATCATACAAGATTCAAGTGTAGATATTTTACAAGCTTTACGTTCAAGTGAAGTAGGTGATGAAAAAGATGAAGATTTCAGATACCAAGTAGAAGAATATAAGAAAGTGGAATCTGACATTGAGAACTCTTTAGAAAACAATGAAAAAGTGTTGGAAGTAGAATTAACTGAACAAATAAATAACCCCAATCCTGAAGAAACATCTGAAACAAAATCAGTGGAAGATTTTAATGTAGCGGCTAATGCAATGGTTGAAACTGAAGCCATTACACCTGAACCAACCTATGACAAAGAAAACGTTGTTGCAGATATTCACACTGAAGAACCCCAAGATATTTTCCCTGAAATTTCATCTAAACACACAATGCCCCCTGAAATTAGATTGTATGGGCAGGAATTTACTTTAAGTGAAAATGCAGATTCGCCTGTTCCTTCACCTCAGCCAGTTGCATCACCTCTTCCGACCCAAAACCAAAATTTCGACGAGCTTCAAAACAACAGGATTTCTTCTCCGGCAAAAGAATTCGAATTATTTGCTAACTCTCCTAAGCCGAGTGAAACTTTTACTCCCAAAGAAAATTTATCTGCCCGAGAATCCCCTCTACCAACTGAATCACCATTGCTCACTGAACCAGCTCTTTCTAAGGAATCACTATTACGTTCAGATTCACCTCTCCATATAGAATCCCCATTCCATGCTGAATCTCCATTGCCTGCTGAGTGTCCTTTGTCAGATGAGCATGATGTACCAGTTGAGTCTCCACTGCCTACAGAAGAAACATTGCTTCCTTCTGAATGTCTTTTACCTGAAGAGTCTCCTTTACCGTCGGAATCTCCACTACCAGCCGAGAATGTTACTCCTGAAACGGAATCTACCATTCAAACAGACCATCCACTTCCCACAGTCGATGACCACCCAGTATCTTCCCCCCTGCCAGTTGCTACTTCACTAGAACCTCGTGAAACAACAACAGAATTAGATGAGTCAGTCAAAGTAACCAAAGACTCCAGGTCGAATTCGCCTTTACCAGCTGAGGTTCCTTTGCCACGTGAATCACCCATACCAGCTGAAAGTCATATTCCAGTCGATGATCTAATCACTTCAATTGAAACGCCTTTAGAGTCTACAATCCAGGAAGTAGCTTCTGTTGAGGATCAGCCCGAAGTAGAGCGAGAAAAATCCGACGTCTCCCTCGAACCGGTCCGTACGGAGGTAGTAGAACCTATGGAATCGACAGAACCGGAGGATTCATTGATGTCAGTCTCTGCTGAACCGCTTGAAATGAAGGATTCTCTGGCGTCCGTAAGTCCAGAACCACTAGAAGTGAAGGATCCTTTGGCGACTGTAATTCCAGAACCGCTCGAAGAAAAGGAGTCTGTAACTACGGAACCTCTCGAAGTGAAGGACTCTCAAGCGTCTGTAACTGCGGAACCTCTTGAAGTGAAAGACCCCCTGGCGTCTGTAACTACAGAACTACTCGAAGCGAAGGCACCTTTAACTTCAGAATCGCTGGAAGCTGTGGATCCTCTGGATTCGGTGCCTGCAAAACCGCTGGAAGCGATAGAAATTTCGCCACTGTTGAATACAGAGCTGGCAGATTCTGAAAGTTCAATCGCAGAATCGGTAATTCAGCCTTCTATCGAAAAATCGGTACCGGCACCTGACGTAGTGCCCGAAGAACGTGGAGAACTCGTTACGGATATCGACATCGGGATTCCGGAAAGGCGCGCTCAAGAGATTTGCGTACCTGTCACAAACGAAATAAGACCGGAAGAGGCCGAACAGCCACCCGCCGCCGCCACGCCTCCTCCGACGCCTGCTGTGGATCTCTCCGCCGCCCTCGCCGACACGCCACTCGCTGCCGACATCGCCGCCCCAGCCCTCGCCGCCACCGCCATTGCGGGAGCTGTGACCGCTGCTGCTCTTGTTAAAACAAAAACACCCACTTCCACAAAAAAATCACCTTCGACTCCGGCGACTAAAACTGATGTGCGAACACCCAAATCAGCTGCAAAGACTGCTACTCCGCGCAGCGCTCCGCCCTCCGCTAAAAAAACAGAAACCGTCACAAAAGCGACCCCGACATCCGCTCGAAGTGCCGCTACGCGTACTACGTCTTCTACCACGAAGACTGCCCCCAAAGCGAGCGCCGCTCCACCAAAGCCGACGCCTCCATCCGCGAAGCTCCCGACATCGAAACCGATGGCCATCACCAGAACGACCACCGTTAAGTCGACGACGACCGTCCCGAAATCGACGACGACAGCTACGAAAACCACAACCGCGTCCAAATCGGCGACTCCAACGACGAAAACTTCTCCTGCCCCAGTCGGTCGATCTAGTGGTGCCAAACCAAGCACGCCCACATCGAAACCGGCCGCGCGAGACCCTCCGCTCGGCGCGAAGGTTGCTCCAAAGACGTCCGCGGCGCCTCGCACCGCCGCCCCTGCAGCTGCGGCCCCGCGTCCCGCCGCCCCCGCGCCCTCTGCCGCTCGCCCCGCGCCTCGCCCTCCCGCCGCCCGCGCCCCGCCCCGCGCCGCTGCACCAGCCGCGAAGCCGAAACCTAAACCTATCGAAAAGCCACTTACTAACGGTGACGTCAAGGATACAAAACTGCCTGCAAGAGTCGCCCCCCGCGCCCCGCCTGCGCGCCCTGCAGCCCGCCCCGCACCCCCCACAAAAACGACGGCTTCCAATCGTCCTCTGGACAAGCAAAGTAAGGATCTCGCAAACAAACGCATCACAGCCAAGACTGCGCCGCCCCGGACCGCTTCCGCCAAGCCCGCCGCCGGTCCGAAGGGCACCGCACCGAAGGCTGTGCCGAAAAAGCCAATTATTGACTCCTTAAAGAAAGAAATAAAGGAGACGCTGACGAACGGTGAGGACGTAGTGAAGCCGCCGCCGAGCCCGCCCGCCGCGGACAACGCACTGCTGCCGGACGTGATCGCGTGA
Protein
MVDDLKAVTKRLIIQAKKLGSADNISIIVVFLKDPRDIVADNYPPMDLGLDNTLANVTPFAVETESCRRQVDIASGGDADAEAETEPADNGVDNSDSDSEDLGPETAVDVDDIDAEKNPEPAPPTPPAHTVEEGHVDGALVDNVAESGEDSEDEWNYYKGEGEREEKNASEEPEEQPRSETPCQDNSGWESSSVDMNSSPLNPDAPVFVPGSAATDVLLAESPRKPLPMDDIDLPDVTQFRTEAVVRPAELLDLDNCDQLNGHHNATIEDTMKEQINGNDNCNMDSLGFGFNVGIEPDKVKDVELIQDFERIQKDTTDFCNIQVFQTHAEANPFALEENDELFERLKNKERDPMSMSFYQEKDDDTCERLTKNDLQVDLNAVQPLPDSDDEDLQQNGICENSEGDDKENVNPKLDADLTEADINSQEPNNDIMILNDKMGALSNNVCNFNEGDNFVDYNINSSDNLQSFSNIEYETTTQETVIQTDTPESHKLMFEQIPEIPDGKSSELGFTNDELQDCSDSEKDLRAITPLDKNKNNSENEIHDDEIQSEVAESFIKELEEDLEKEHEPEIIQDSSVDILQALRSSEVGDEKDEDFRYQVEEYKKVESDIENSLENNEKVLEVELTEQINNPNPEETSETKSVEDFNVAANAMVETEAITPEPTYDKENVVADIHTEEPQDIFPEISSKHTMPPEIRLYGQEFTLSENADSPVPSPQPVASPLPTQNQNFDELQNNRISSPAKEFELFANSPKPSETFTPKENLSARESPLPTESPLLTEPALSKESLLRSDSPLHIESPFHAESPLPAECPLSDEHDVPVESPLPTEETLLPSECLLPEESPLPSESPLPAENVTPETESTIQTDHPLPTVDDHPVSSPLPVATSLEPRETTTELDESVKVTKDSRSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVASVEDQPEVEREKSDVSLEPVRTEVVEPMESTEPEDSLMSVSAEPLEMKDSLASVSPEPLEVKDPLATVIPEPLEEKESVTTEPLEVKDSQASVTAEPLEVKDPLASVTTELLEAKAPLTSESLEAVDPLDSVPAKPLEAIEISPLLNTELADSESSIAESVIQPSIEKSVPAPDVVPEERGELVTDIDIGIPERRAQEICVPVTNEIRPEEAEQPPAAATPPPTPAVDLSAALADTPLAADIAAPALAATAIAGAVTAAALVKTKTPTSTKKSPSTPATKTDVRTPKSAAKTATPRSAPPSAKKTETVTKATPTSARSAATRTTSSTTKTAPKASAAPPKPTPPSAKLPTSKPMAITRTTTVKSTTTVPKSTTTATKTTTASKSATPTTKTSPAPVGRSSGAKPSTPTSKPAARDPPLGAKVAPKTSAAPRTAAPAAAAPRPAAPAPSAARPAPRPPAARAPPRAAAPAAKPKPKPIEKPLTNGDVKDTKLPARVAPRAPPARPAARPAPPTKTTASNRPLDKQSKDLANKRITAKTAPPRTASAKPAAGPKGTAPKAVPKKPIIDSLKKEIKETLTNGEDVVKPPPSPPAADNALLPDVIA

Summary

Uniprot
H9JAR8   A0A2H1WDF1  
Pubmed
19121390   
EMBL
BABH01008532    BABH01008533    ODYU01007908    SOQ51099.1   
Proteomes
UP000005204   
PRIDE
H9JAR8   
ProteinModelPortal
H9JAR8   A0A2H1WDF1  

Ontologies

KEGG
101737962    K17501 protein phosphatase 1E [EC:3.1.3.16] | (RefSeq) protein piccolo-like
GO

Topology

Length:
1554
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.6254
Exp number, first 60 AAs:
0.01264
Total prob of N-in:
0.00064
outside
1  -  1554
 
 

Population Genetic Test Statistics

Pi
227.958842
Theta
177.932802
Tajima's D
0.74625
CLR
0.467544
CSRT
0.593720313984301
Interpretation
Uncertain
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