SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05521
Pre Gene Modal
BGIBMGA006732
Annotation
PREDICTED:_sulfotransferase_family_cytosolic_1B_member_1_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.414
 

Sequence

CDS
ATGATCACTTGTGAATACACCTCACGAACTACGTGGACTCAAGAACTAGTTTGGATGGTGGCTAATGACCTAGATTATGAAAAATCAGCTGCAGTGCCGCTTACCCAGAGATACCCATTTTTAGAGTTTTCAATATGCGTCCATCCCGTCATGAAGAAAAAATTCACGGAAGAGAATAGTTACAGCGAGGACAAACTGAAGCTTTTAGAAGATGTCATCCAACCCGGGACTGATCAACTAGCTTCTATGCCTTCGCCTCGCTTCATAAAGACACATCTGCCACTATCTCTGTTACCTCCTGATCTGTTAGAAACAGCAAAGATGGTTTATGTGGCCCGGGACCCGAGGGATGTAGTGGTATCGTTCTATCACCTCAACAGATTGATCAGAACTCAAGGCTACATTGGAGATTTCAAAACTTATTGGCACTACTTTATTAATGATTTACATCACTGGACTCCGTACTTTGAACACTTAAAAGAAGCATGGGAGAAAAGACATCATCCAAATCTTCTATTTTTGTTTTACGAAGAACTCTCCAAAGACTTGCAGAAGACAGTTCGTCGAGTGTCACAATTTTTCAATAAGGATTATACGATGGACGAGATAATTAAATTGTGCGAACACCTCAGTATCATGAACTTTAAAAATAACAAATCCGTAAACTTCAACGTGATGGCAGAACTCGGCGTGACTATAACAGGGGAGCAATCCTTCATACGAAAAGGTAAGGCCGGTGGCTGGAGAGACTATTTTGACGAAGAAATGACTAAAGAAGCAGAGAGCTGGATGCAAAACAATCTGCGCGACACCGACCTACGATTCCCGCACTTAGAAGATTTCTAA
Protein
MITCEYTSRTTWTQELVWMVANDLDYEKSAAVPLTQRYPFLEFSICVHPVMKKKFTEENSYSEDKLKLLEDVIQPGTDQLASMPSPRFIKTHLPLSLLPPDLLETAKMVYVARDPRDVVVSFYHLNRLIRTQGYIGDFKTYWHYFINDLHHWTPYFEHLKEAWEKRHHPNLLFLFYEELSKDLQKTVRRVSQFFNKDYTMDEIIKLCEHLSIMNFKNNKSVNFNVMAELGVTITGEQSFIRKGKAGGWRDYFDEEMTKEAESWMQNNLRDTDLRFPHLEDF

Summary

EMBL
BABH01008529    BABH01008530    BABH01008531    ODYU01007908    SOQ51100.1    KQ460458    + More
KPJ14654.1    AGBW02008382    OWR53534.1    AK401549    BAM18171.1    KQ458793    KPJ05084.1    KQ461198    KPJ06271.1    KPJ05079.1    NWSH01000001    PCG81087.1    PCG81089.1    NNAY01000980    OXU25629.1    LADJ01060126    KPJ21605.1    KPJ06273.1    ODYU01007663    SOQ50641.1    AAZX01000018    GEDC01013553    JAS23745.1    KPJ06275.1    ODYU01005448    SOQ46321.1    ODYU01012890    SOQ59422.1    KK853064    KDR11875.1    PCG81091.1    SOQ50640.1    NEVH01000613    PNF43242.1    KT000403    ANI86001.1    PCG81090.1    ODYU01000444    SOQ35226.1    KPJ05083.1    RSAL01000015    RVE53120.1    KPJ21606.1    GL448783    EFN83857.1    KZ288232    PBC31513.1    RSAL01000014    RVE53184.1    KQ971361    KYB25866.1    KQ414905    KOC59625.1    KPJ05082.1    GL888030    EGI69148.1    KPJ05080.1    KPJ06272.1    GL762454    EFZ21395.1    EFN83859.1    OWR53533.1    AAAB01008987    EAA01764.4    GANO01001601    JAB58270.1    GL439579    EFN66998.1    KQ978068    KYM97385.1    GBYB01015302    JAG85069.1    AXCN02001171    KQ982907    KYQ49408.1    APCN01000869    KPJ05081.1    KQ980849    KYN12229.1    GEZM01016993    JAV90978.1    ODYU01003446    SOQ42235.1    AXCM01017667    GEZM01016991    JAV90980.1    KQ976714    KYM76939.1    KX098000    ANH56805.1    OWR53535.1    LJIG01022695    KRT79203.1    ADTU01008904    ADTU01008905    ADMH02001203    ETN63743.1    CVRI01000073    CRL07685.1    OWR53536.1    KQ435922    KOX68659.1    U28654    AAC47136.1    ATLV01015189    KE525003    KFB40172.1    KQ981810    KYN35407.1    GECL01001637    JAP04487.1    GFDF01000367    JAV13717.1    GDUN01000913    JAN95006.1    DS231819    EDS42772.1    GBBI01001698    JAC17014.1    GBBI01001669    JAC17043.1    AJVK01006195    AJVK01006196    AJVK01006197    BABH01007899    GDKW01001118    JAI55477.1    ACPB03012361    GAHY01001328    JAA76182.1    KK108145    EZA46856.1    GFTR01005326    JAW11100.1    GFTR01005206    JAW11220.1    QOIP01000010    RLU17921.1    GFTR01005158    JAW11268.1    AJWK01010784    AJWK01010785   
Pfam
PF00685   Sulfotransfer_1        + More
PF00226   DnaJ
PF00557   Peptidase_M24
PF00096   zf-C2H2
PF04088   Peroxin-13_N
PF14604   SH3_9
PF01556   DnaJ_C
PF08366   LLGL
PF00957   Synaptobrevin
PF00684   DnaJ_CXXCXGXG
Interpro
IPR000863   Sulfotransferase_dom        + More
IPR027417   P-loop_NTPase       
IPR000994   Pept_M24       
IPR018253   DnaJ_domain_CS       
IPR036005   Creatinase/aminopeptidase-like       
IPR036869   J_dom_sf       
IPR001623   DnaJ_domain       
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR036028   SH3-like_dom_sf       
IPR007223   Peroxin-13_N       
IPR001452   SH3_domain       
IPR001388   Synaptobrevin       
IPR002939   DnaJ_C       
IPR012724   DnaJ       
IPR001680   WD40_repeat       
IPR000664   Lethal2_giant       
IPR001305   HSP_DnaJ_Cys-rich_dom       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR013577   LLGL2       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR008971   HSP40/DnaJ_pept-bd       
IPR036410   HSP_DnaJ_Cys-rich_dom_sf       
SUPFAM
SSF52540   SSF52540        + More
SSF46565   SSF46565       
SSF55920   SSF55920       
SSF57667   SSF57667       
SSF50044   SSF50044       
SSF49493   SSF49493       
SSF50978   SSF50978       
SSF57938   SSF57938       
Gene 3D
PDB
1FML     E-value=8.22257e-60,     Score=582

Ontologies

Topology

Length:
281
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0685
Exp number, first 60 AAs:
0.00082
Total prob of N-in:
0.14877
outside
1  -  281
 
 

Population Genetic Test Statistics

Pi
257.196309
Theta
181.991218
Tajima's D
1.121013
CLR
0.864767
CSRT
0.692265386730664
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号