SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05518
Pre Gene Modal
BGIBMGA006730
Annotation
PREDICTED:_uncharacterized_protein_LOC106141905_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 2.316
 

Sequence

CDS
ATGGTCAACTATCGACGAGTAGTGTATGAGGTAGCGGCGTTGGGCGCGTTATTGGCGCTCGCTGCGGCAGCTCCACTTAATTCTGACTGTAAGGAAGAATACAATCAGAGTCAGAATGGAACGGAAAATTTTCGGGTTCACGTAAACGGGCTAGTCATCGCCATGATGCCGGCCGAGTCGTTTGCCGAATCATTGTTGTCGGCGATGCCCGACTTAGAAGAGCTGTTGGAGTCTGAAGGGATTAATCAGTTGCAACAACAAAAGCCGAAACCTCCGATGGTCACCTCTCCGCCTAAGCCTGAAGAAAAACCTCAAACGGAGTCCGAAGTTTTGGCCACATCTGAAAATCCAAAGCCTACAGAATCGGCGGCGCCTTTGAGCGATGTCTCCATAAAATCAGATACACCACACAATAAAGAAGCGTCCGTAAATAAACAAAAACGACCACAAAGGCTGAAATCAATGCTGGCTAGTTTGTTGCTGCCCCTGATGCGTAAGAACAGACATCACTAA
Protein
MVNYRRVVYEVAALGALLALAAAAPLNSDCKEEYNQSQNGTENFRVHVNGLVIAMMPAESFAESLLSAMPDLEELLESEGINQLQQQKPKPPMVTSPPKPEEKPQTESEVLATSENPKPTESAAPLSDVSIKSDTPHNKEASVNKQKRPQRLKSMLASLLLPLMRKNRHH

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.833259
 
 
Length:
170
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
16.61501
Exp number, first 60 AAs:
16.52864
Total prob of N-in:
0.91605
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  26
outside
27  -  170
 
 

Population Genetic Test Statistics

Pi
51.719094
Theta
61.874333
Tajima's D
0.481969
CLR
31.62802
CSRT
0.512524373781311
Interpretation
Uncertain
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