SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05514
Pre Gene Modal
BGIBMGA006726
Annotation
death_related_ced-3/Nedd2-like_protein_[Bombyx_mori]
Full name
Caspase-8      
Alternative Name
Death-related ced-3/NEDD2-like protein
Location in the cell
Nuclear   Reliability : 3.245
 

Sequence

CDS
ATGTTTCGACCTGACGCTTTAGATGAACGAGCTGCATTAGACCGACAGATTATTCACAGCAATCTTATAAATGTCGATGTCATTTCTCAAATCGAAAGAGAATTGCAAGATGAGCCGTATGACATGGTATCTCTAGTGTTCCTGTTGTATGAAGTACCGGATACTGCTTTGCAGAAGTTAGTTACACATCAAAAGATAGTGACAGAAATGCTTGGAACTAATTTGAATTTACTTCATGACTGGTATCAGCATTCAAAATCGAAACCCACTTGGAAACATGAGTTCCTGGAGGCACTTCTTATTTGTCAATTGTTTAACATAGTTCGAAGAATAGGATTTGATGTCCAAACGCTTCGAAAGCATTACCAGACAGATTACCCAGGATTAAGTATGTATGTTGATCCTTTAAGAAAGATTTTATATAAAATATGTGAAGAAATAGACACTCCAAATTTAATAAAACTTCAAAAATCCTTATTGACATATGATATAGATGTAAGCGGGCACAATATATGTGAAATTATATTACTTGAACTTATGTCAAGAAGATTCATAGGGATTAAGTATTACAGACATGATGAAAAATACCTTACTGAAATAAAAATTGATAAGTTTCTGAGAATAATTGAAAACTTTGATGGATTGAGAAAGTTATCATTAGATTTAAAATTTCTACAGAATAAATTTGCCAATGAAACAAATCCAAATAATTCCCTCAAGTGTAAGATGGATACTACATCACAACAAAATGAACAACCTGTATTAGTTGAACATACAAATGAAGGAGGGATTTTTGATATTAACAATCTTTTAGACATACATGAAGATTTAGAAAAATTGCAAATTAATGATGGTTTTCATTTTGAAGCCGATAAGAATAGACACATGGAAGAAATTTATGAAATAAAAAATAAAAATAGATTAGGATTGTGTTTAATAATAAATCAAGAGAACTTCTATCCATCAAGGCAAAGTATAGAACTTAACAATCAAATGGATCCATTACAAACAAGGACTGGATCAACCAAAGACAGAATTGCATTAGAAAATACAATGTCATTATTTAATTTCGTAGTTAATAGTCGTTCTGACTTGGGACACAAAGAGATGATTAATTTCATAAAAGATAATATCAAAAACAATATTCATGAAGATGATAGCATGTTCATGTTATGTATTTTGTCACATGGTGTGCGAGGGCACATTTTTGCAGCAGATTCAGTGAAAATTAAAGTTGAAGATATACAAAAGCTATTGGACTCTGATGAAGCAAAGAAACTGCATTGCATACCGAAAGTTCTTATAATCCAAGCTTGTCAAGTTATTGAAAACCAAAATCCATATCTAACAACTGACTCGCCCTTGGGTAATATATTCATAAAAAAATCAGATTTTCTAGTATACTGGGCAACAGCACCTGAATATGAAGCTATAAGACACATTACTAAAGGAACTGTGTTCATACAAAATCTTTGCAAAGCAATTAGACTTTATGGAAATAAAAAACATTTATCAGATATTTTTACTATTGTCAATAATACAGTCACAAACTACTGCATGAAACTGAATCATCCTCAGGTTCCCATTTATGAAAATAGCTTAAGAAGGGCACTTTACTTATTTAAGCCATGA
Protein
MFRPDALDERAALDRQIIHSNLINVDVISQIERELQDEPYDMVSLVFLLYEVPDTALQKLVTHQKIVTEMLGTNLNLLHDWYQHSKSKPTWKHEFLEALLICQLFNIVRRIGFDVQTLRKHYQTDYPGLSMYVDPLRKILYKICEEIDTPNLIKLQKSLLTYDIDVSGHNICEIILLELMSRRFIGIKYYRHDEKYLTEIKIDKFLRIIENFDGLRKLSLDLKFLQNKFANETNPNNSLKCKMDTTSQQNEQPVLVEHTNEGGIFDINNLLDIHEDLEKLQINDGFHFEADKNRHMEEIYEIKNKNRLGLCLIINQENFYPSRQSIELNNQMDPLQTRTGSTKDRIALENTMSLFNFVVNSRSDLGHKEMINFIKDNIKNNIHEDDSMFMLCILSHGVRGHIFAADSVKIKVEDIQKLLDSDEAKKLHCIPKVLIIQACQVIENQNPYLTTDSPLGNIFIKKSDFLVYWATAPEYEAIRHITKGTVFIQNLCKAIRLYGNKKHLSDIFTIVNNTVTNYCMKLNHPQVPIYENSLRRALYLFKP

Summary

Description
Effector of the programmed cell death (PCD) activators rpr, grim and W. May play an apoptotic role in the germline as well as soma. Role in immune response, required to resist Gram-negative bacterial infections by regulating DptA. Fadd interacts with Dredd, Fadd promotes cleavage of Dredd and is necessary and sufficient for enhancing Dredd-induced apoptosis.
Effector of the programmed cell death (PCD) activators rpr, grim and hid (PubMed:9740659). May play an apoptotic role in the germline as well as soma. Fadd interacts with Dredd to promote cleavage of Dredd and is necessary and sufficient for enhancing Dredd-induced apoptosis (PubMed:10934188). Plays a role in the innate immune response. Required for resistance to Gram-negative bacterial infection (PubMed:11269502). Diap2-mediated ubiquitination of Dredd is critical for processing of imd and rel and the subsequent expression of antimicrobial genes such as DptA (PubMed:22549468).
Catalytic Activity
Strict requirement for Asp at position P1 and has a preferred cleavage sequence of (Leu/Asp/Val)-Glu-Thr-Asp-|-(Gly/Ser/Ala).
Subunit
Heterotetramer that consists of two anti-parallel arranged heterodimers, each one formed by a 15 kDa (caspase-8 subunit p15) and a 10 kDa (caspase-8 subunit p10) subunit. Interacts with the N-terminus of Fadd (By similarity).
Heterotetramer that consists of two anti-parallel arranged heterodimers, each one formed by a 15 kDa (caspase-8 subunit p15) and a 10 kDa (caspase-8 subunit p10) subunit (PubMed:9740659). Interacts (via N-terminus) with Diap2; likely to bind Diap2 simultaneously with Fadd to form a trimeric complex (PubMed:10934188, PubMed:22549468).
Similarity
Belongs to the peptidase C14A family.
Keywords
Apoptosis   Complete proteome   Cytoplasm   Hydrolase   Immunity   Innate immunity   Protease   Reference proteome   Thiol protease   Zymogen   Alternative splicing   Ubl conjugation  
Feature
chain  Caspase-8 subunit p15
splice variant  In isoform alpha.
EC Number
3.4.22.61
EMBL
BABH01008520    AB292816    BAF98475.1    NWSH01000001    PCG81126.1    HQ328982    + More
AEK20839.1    HQ328981    AEK20838.1    JX040310    AFO64608.1    KU668855    AMR71144.1    JTDY01000408    KOB77332.1    JQ768052    AFJ04536.1    HQ328983    AEK20840.1    HM234679    AEF30497.1    KQ461198    KPJ06283.1    GDQN01001913    JAT89141.1    AGBW02009100    OWR51688.1    KQ458793    KPJ05070.1    HQ328980    AEK20837.1    MH200927    AXS59137.1    KQ971342    EFA04648.1    KY056148    ATX63070.1    GALX01002893    JAB65573.1    APCN01002368    AXCN02001076    CH478203    EAT33580.1    AAAB01008986    GAMC01016478    JAB90077.1    AXCM01008478    DQ860099    ABI74776.1    KK852914    KDR13883.1    ADMH02001049    ETN64316.1    ATLV01022353    KE525331    KFB47561.1    AJVK01021192    CH379063    EAL32626.1    KRT06185.1    KRT06187.1    AJWK01005641    CH940653    EDW62265.1    KP274213    AJC98276.1    CH963925    EDW78460.1    KP274202    AJC98265.1    KP274219    AJC98282.1    KP274214    AJC98277.1    KP274220    AJC98283.1    KP274203    AJC98266.1    KP274205    AJC98268.1    KP274208    AJC98271.1    GBXI01002230    JAD12062.1    KP274212    AJC98275.1    KP274218    AJC98281.1    GEZM01024088    GEZM01024087    GEZM01024086    JAV87989.1    JXUM01104218    KQ564868    KXJ71641.1    CM000162    EDX00805.2    KP274221    AJC98284.1    CP012528    ALC49680.1    APGK01028352    KB740686    KB631930    ENN79559.1    ERL87316.1    CH954183    EDV45383.2    GDAI01002428    JAI15175.1    CH916371    EDV92202.1    AF007016    AF083894    AF083895    AE014298    AL031581    AY060275    AF031652    AHN59222.1    JRES01000127    KNC33965.1    UFQS01000611    UFQT01000611    SSX05362.1    SSX25723.1    MG279147    AZR38348.1    GECU01011565    JAS96141.1    CH479204    EDW30626.1    GECU01029950    JAS77756.1    KP204031    AKT27901.1    JXJN01000032   
Pfam
PF00370   FGGY_N        + More
PF02782   FGGY_C
PF00472   RF-1
PF13886   DUF4203
Interpro
IPR029030   Caspase-like_dom_sf        + More
IPR001309   Pept_C14_p20       
IPR015917   Pept_C14A       
IPR002138   Pept_C14_p10       
IPR002398   Pept_C14       
IPR018484   Carb_kinase_FGGY_N       
IPR018485   Carb_kinase_FGGY_C       
IPR006003   FGGY_RbtK-like       
IPR000352   Pep_chain_release_fac_I_II       
IPR033139   Caspase_cys_AS       
IPR001875   DED_dom       
IPR016129   Caspase_his_AS       
IPR040236   TMEM198       
IPR025256   DUF4203       
SUPFAM
SSF52129   SSF52129       
PDB
4HVA     E-value=1.09895e-18,     Score=231

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
543
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00780999999999998
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.00129
outside
1  -  543
 
 

Population Genetic Test Statistics

Pi
120.349182
Theta
136.405243
Tajima's D
-0.807363
CLR
0.445834
CSRT
0.173341332933353
Interpretation
Uncertain
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