Gene

KWMTBOMO05513

Pre Gene Modal

BGIBMGA006615

Annotation

PREDICTED:_probable_peptide_chain_release_factor_C12orf65_homolog?_mitochondrial_[Plutella_xylostella]

Location

Bomo_Chr10(-):4005091-4007392      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.451

CDS

ATGTTCTTGCTCACTTCAAAATATTTTAGAAATTTCAGTCCACGCTTAGCAGCTGCCTTTAAACATACAATAGATTATTCCAAAGTACCAAAGATCAATGAGTGTGAATTATCTGAAAAATTTGTTAGAGGAAGTGGCCCAGGAGGGTCAGCTGTAAACAAGAATTCTAATTGTGTGGTTCTTACACACATCCCCACAGGTACCGTCATAAAATGTCACACAAGTCGTTGTCAAGACGATAATCGGAAGAAAGCCCGGGAATTGTTAATTGAAAAACTGGATGATATGATCAATGGCCCTGAAAGTGTATCGGCGCAGAGGAAACTTATCGAAGAAAAAAAGTATAAACGGAATGCAACAAAAAAACAGAAAATATCCAAATTAAAAGATGAATGGAAGAAACGGGAAGGCATAATATAA

Protein

MFLLTSKYFRNFSPRLAAAFKHTIDYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKISKLKDEWKKREGII

Similarity

Belongs to the complex I LYR family.
Belongs to the peptidase C14A family.

Uniprot

H9JAS0   A0A2A4KA91   A0A212FD70   A0A2H1WUA7   A0A194QMU7   S4P6E3   + More
A0A3S2NNL5   A0A0L7KWJ4   A0A194QJI1   A0A139WBI1   A0A1S3CUU9   A0A2S2P9I4   A0A1Y1M503   A0A2H8TLV1   A0A1B6IL58   A0A067QJ88   A0A2J7QIA8   A0A1B6EMI9   A0A1B6GAV5   J9K690   A0A1B6FAU9   A0A2P8YWX5   E9IC99   A0A1B0G2H6   A0A1B0ASP0   A0A1A9X5Y6   T1JD56   U5ERN3   W8AS58   F4W6J7   A0A034VHC2   A0A195D4D5   A0A195FIW3   A0A023EG47   A0A336M716   A0A1Q3FDI5   A0A2M4C2N3   A0A0J7KVU4   A0A1B0CIX3   A0A2M4C211   T1E7G6   A0A2M4C1I5   A0A195BT32   A0A2M4C1R4   A0A2M4C1S1   A0A131Y4F9   B0WTD3   A0A1Q3FDF9   A0A1Q3FCJ5   A0A1Q3FFY6   A0A1B6MJR7   A0A147BVD8   G3MTT4   A0A023G3R3   A0A158P2A3   A0A023G557   A0A1B6CSW7   Q16IE2   A0A023EE42   A0A023EE61   A0A224XQ80   A0A1Q3FGQ4   A0A0P4VH78   A0A1B0DP52   E2AU99   A0A2M3ZDK7   A0A161MH91   A0A0A9WA79   W5JGE5   Q291R9   A0A146MDV0   A0A0V0GBW1   E2C027   A0A2L2Y142   A0A293MUK3   B4GAC8   A0A182FKM5   A0A1I8NFA6   A0A1I8PVY9   A0A1L8E0D9   A0A0R1DY86   A0A195E461   A0A023EGH2   A0A182SHR9   A0A182NZ98   A0A0C9SAH2   A0A224Z8J5   A1ZAD7   A0A023FHE1   J3JUQ8   N6ULT0   B4HSV8   L7LYY0   A0A182IVG9   B3MFM5   A0A1L8E0B0   A0A1W4UZI5   A0A151X265   B4NVC0   A0A182WR41  

Pubmed

19121390    22118469    26354079    23622113    26227816    18362917    + More
19820115    28004739    24845553    29403074    21282665    24495485    21719571    25348373    24945155    29652888    22216098    21347285    17510324    27129103    20798317    25401762    20920257    23761445    15632085    17994087    26823975    26561354    25315136    17550304    26131772    28797301    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22516182    23537049    25576852    22936249   

EMBL

BABH01008520    NWSH01000001    PCG81127.1    AGBW02009100    OWR51689.1    ODYU01011114    + More
SOQ56649.1    KQ461198    KPJ06285.1    GAIX01006876    JAA85684.1    RSAL01000201    RVE44433.1    JTDY01005001    KOB67490.1    KQ458793    KPJ05070.1    KQ971372    KYB25211.1    GGMR01013502    MBY26121.1    GEZM01040309    JAV80899.1    GFXV01003204    MBW15009.1    GECU01020046    GECU01007126    JAS87660.1    JAT00581.1    KK853300    KDR08762.1    NEVH01013957    PNF28309.1    GECZ01030658    JAS39111.1    GECZ01010208    JAS59561.1    ABLF02029696    GECZ01022518    JAS47251.1    PYGN01000312    PSN48735.1    GL762231    EFZ21809.1    CCAG010018314    JXJN01002890    JH432094    GANO01003667    JAB56204.1    GAMC01017648    JAB88907.1    GL887707    EGI70332.1    GAKP01017792    JAC41160.1    KQ976885    KYN07294.1    KQ981523    KYN40311.1    GAPW01005803    JAC07795.1    UFQS01000640    UFQT01000640    SSX05646.1    SSX26005.1    GFDL01009428    JAV25617.1    GGFJ01010117    MBW59258.1    LBMM01002773    KMQ94384.1    AJWK01013857    GGFJ01010050    MBW59191.1    GAMD01003072    JAA98518.1    GGFJ01010045    MBW59186.1    KQ976408    KYM91128.1    GGFJ01010119    MBW59260.1    GGFJ01010116    MBW59257.1    GEFM01002408    JAP73388.1    DS232085    EDS34371.1    GFDL01009434    JAV25611.1    GFDL01009741    JAV25304.1    GFDL01008582    JAV26463.1    GEBQ01003878    JAT36099.1    GEGO01000902    JAR94502.1    JO845286    AEO36902.1    GBBM01006517    JAC28901.1    ADTU01007045    GBBM01006516    JAC28902.1    GEDC01020738    JAS16560.1    CH478086    CH477828    EAT34024.1    EAT35857.1    GAPW01005996    JAC07602.1    GAPW01005700    JAC07898.1    GFTR01001770    JAW14656.1    GFDL01008307    JAV26738.1    GDKW01003696    JAI52899.1    AJVK01018086    GL442815    EFN62956.1    GGFM01005841    MBW26592.1    GEMB01002500    JAS00686.1    GBHO01038940    GBRD01010572    GBRD01001890    JAG04664.1    JAG55252.1    ADMH02001585    ETN61965.1    CM000071    EAL25043.3    GDHC01001437    JAQ17192.1    GECL01000739    JAP05385.1    GL451712    EFN78723.1    IAAA01007888    LAA01883.1    GFWV01019754    MAA44482.1    CH479181    EDW31880.1    GFDF01001968    JAV12116.1    CM000158    KRK00218.1    KQ979657    KYN19943.1    GAPW01005804    JAC07794.1    GBZX01002588    JAG90152.1    GFPF01012755    MAA23901.1    AE013599    BT030757    AAM68513.1    ABV82139.1    AHN56281.1    GBBK01004043    JAC20439.1    BT126973    AEE61935.1    APGK01018751    KB740082    KB631720    ENN81596.1    ERL85577.1    CH480816    EDW48122.1    GACK01008029    JAA57005.1    CH902619    EDV37715.1    GFDF01001967    JAV12117.1    KQ982580    KYQ54497.1    CH987229    CM002911    EDX16001.1    KMY94236.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000283053    UP000037510    + More
UP000053268    UP000007266    UP000079169    UP000027135    UP000235965    UP000007819    UP000245037    UP000092444    UP000092460    UP000092443    UP000007755    UP000078542    UP000078541    UP000036403    UP000092461    UP000078540    UP000002320    UP000005205    UP000008820    UP000092462    UP000000311    UP000000673    UP000001819    UP000008237    UP000008744    UP000069272    UP000095301    UP000095300    UP000002282    UP000078492    UP000075901    UP000075884    UP000000803    UP000019118    UP000030742    UP000001292    UP000075880    UP000007801    UP000192221    UP000075809    UP000000304    UP000075920   

PRIDE

H9JAS0    A1ZAD7    L7LYY0   

Pfam

PF00472   RF-1        + More
PF05347   Complex1_LYR

Interpro

IPR000352   Pep_chain_release_fac_I_II        + More
IPR008011   Complex1_LYR       
IPR015917   Pept_C14A       
IPR029030   Caspase-like_dom_sf       
IPR001309   Pept_C14_p20       
IPR002138   Pept_C14_p10       
IPR002398   Pept_C14       

SUPFAM

SSF52129   SSF52129       

ProteinModelPortal

H9JAS0   A0A2A4KA91   A0A212FD70   A0A2H1WUA7   A0A194QMU7   S4P6E3   + More
A0A3S2NNL5   A0A0L7KWJ4   A0A194QJI1   A0A139WBI1   A0A1S3CUU9   A0A2S2P9I4   A0A1Y1M503   A0A2H8TLV1   A0A1B6IL58   A0A067QJ88   A0A2J7QIA8   A0A1B6EMI9   A0A1B6GAV5   J9K690   A0A1B6FAU9   A0A2P8YWX5   E9IC99   A0A1B0G2H6   A0A1B0ASP0   A0A1A9X5Y6   T1JD56   U5ERN3   W8AS58   F4W6J7   A0A034VHC2   A0A195D4D5   A0A195FIW3   A0A023EG47   A0A336M716   A0A1Q3FDI5   A0A2M4C2N3   A0A0J7KVU4   A0A1B0CIX3   A0A2M4C211   T1E7G6   A0A2M4C1I5   A0A195BT32   A0A2M4C1R4   A0A2M4C1S1   A0A131Y4F9   B0WTD3   A0A1Q3FDF9   A0A1Q3FCJ5   A0A1Q3FFY6   A0A1B6MJR7   A0A147BVD8   G3MTT4   A0A023G3R3   A0A158P2A3   A0A023G557   A0A1B6CSW7   Q16IE2   A0A023EE42   A0A023EE61   A0A224XQ80   A0A1Q3FGQ4   A0A0P4VH78   A0A1B0DP52   E2AU99   A0A2M3ZDK7   A0A161MH91   A0A0A9WA79   W5JGE5   Q291R9   A0A146MDV0   A0A0V0GBW1   E2C027   A0A2L2Y142   A0A293MUK3   B4GAC8   A0A182FKM5   A0A1I8NFA6   A0A1I8PVY9   A0A1L8E0D9   A0A0R1DY86   A0A195E461   A0A023EGH2   A0A182SHR9   A0A182NZ98   A0A0C9SAH2   A0A224Z8J5   A1ZAD7   A0A023FHE1   J3JUQ8   N6ULT0   B4HSV8   L7LYY0   A0A182IVG9   B3MFM5   A0A1L8E0B0   A0A1W4UZI5   A0A151X265   B4NVC0   A0A182WR41  

PDB

2RSM     E-value=1.00516e-19,     Score=231

KEGG

101745101    K23498 peptide chain release factor | (RefSeq) probable peptide chain release factor C12orf65 homolo

GO

GO:0003747   GO:0006915   GO:0004197   GO:0005762   GO:0016787   GO:0006415   GO:0006468   GO:0004707   GO:0005524   GO:0031683   GO:0001664   GO:0005525   GO:0007264   GO:0003824  

PANTHER

PTHR10454  

Length:

139

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00053

Exp number, first 60 AAs:

0.00011

Total prob of N-in:

0.09696

outside

1  -  139

 

 

Pi

165.931017

Theta

139.24408

Tajima's D

0.37847

CLR

228.442804

CSRT

0.475376231188441

Interpretation

Uncertain