SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05510
Pre Gene Modal
BGIBMGA006723
Annotation
PREDICTED:_MORN_repeat-containing_protein_3-like_[Amyelois_transitella]
Full name
MORN repeat-containing protein 3      
Location in the cell
Cytoplasmic   Reliability : 2.011 Mitochondrial   Reliability : 1.991
 

Sequence

CDS
ATGCCCACAAAACGCAAGCTTAGGTCCTTTACGCCGTTATTAATAGAAGCGGAAAAAAGATCTGTAAAAAATGGAGTTCACCACGCCGTGTTTACTTCTAGGTTTGATAAATACGTCGGGGATTGGAAGAACGATTTGAAGGACGGGAAAGGCGCTTTTGTCACTGTTTCTGGAAAATTATACGAAGGAGACTGGTATAAAGGTTTTAGGCACGGTTTTGGTGTCTTAAGTAATAAGCTGCCTGATAATACCTATAAACTGGAGTACCGTGGCGAATGGGTTCGCGGAAAACCAGAAGGTGTCGGTTGGCGTTATTACGGCAATGAAGACGTTTACTTCGGTTTCTGGAAAAGTGGTCAAAAACATGGGTACGGTAAAATGTGGTATTCTGACAACACCTTTTACACCGGGTATTGGAATAAAGACCAGAGAGAGGGATTGGGAATGTTTGTAGAAGTTAATGGAAACTGGTATGAAGGCCACTGGGAAAAAAATTTGAAGAGCGGTTTTGGCAGATACTATCACATGCACACTGGACAACTACAGGAGGGCTGCTGGGTGGAAAACATCTGCGTCAAGTCAATGATGTTAGATATTGATGTGAGGCAGTATTGTGATAGGCCCACACAATATCCGATACCAATGGAGCAACTTCAGGACTCTCGACTTATATTAGAAAAGAGCGAATTCTGGGTAAAGCAAAAAATTGGTAGAATTGATAAAAAATTACAAACGTGCATTGATAAAATGAATTCAACGTGA
Protein
MPTKRKLRSFTPLLIEAEKRSVKNGVHHAVFTSRFDKYVGDWKNDLKDGKGAFVTVSGKLYEGDWYKGFRHGFGVLSNKLPDNTYKLEYRGEWVRGKPEGVGWRYYGNEDVYFGFWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGMFVEVNGNWYEGHWEKNLKSGFGRYYHMHTGQLQEGCWVENICVKSMMLDIDVRQYCDRPTQYPIPMEQLQDSRLILEKSEFWVKQKIGRIDKKLQTCIDKMNST

Summary

Keywords
Complete proteome   Reference proteome   Repeat   Alternative splicing  
Feature
chain  MORN repeat-containing protein 3
splice variant  In isoform 2.
EMBL
BABH01008506    AGBW02000411    OWR55777.1    KQ459984    KPJ19031.1    KQ458793    + More
KPJ05067.1    NWSH01002969    PCG67176.1    ODYU01009490    SOQ53970.1    GECZ01008685    JAS61084.1    KQ971369    KYB25615.1    BT126761    AEE61723.1    GEZM01078741    JAV62637.1    GBHO01025370    GBRD01005697    JAG18234.1    JAG60124.1    LZPO01027367    OBS79115.1    RAZU01000164    RLQ67879.1    PYGN01001655    PSN33531.1    AABR07036335    JH882345    ELR49829.1    BC110021    AMGL01039228    KZ288405    PBC26148.1    ACPB03020356    ACTA01056595    GL192354    EFB19359.1    AEFK01094459    AAGW02061428    AAGW02061429    KQ434998    KZC13325.1    AANG04002472    AK015339    AK077141    BC019987    NOWV01000045    RDD42961.1    GEDC01031495    JAS05803.1    DS985241    EDV29133.1    KB320685    ELW65515.1    AEMK02000096    DQIR01027568    HCZ83043.1    KQ417980    KOF89433.1    AEYP01033462    AEYP01033463    AEYP01033464    GFTR01003629    JAW12797.1    KB199861    ESP04174.1    KB111160    ELK26333.1    PZQS01000004    PVD31236.1    AAKN02052338    AAEX03014658    KB030576    ELK14320.1    HAAF01006198    CCP78022.1    KQ042640    KKF12697.1    GG666578    EEN52619.1    AKHW03002185    KYO39737.1    NIVC01002876    PAA54650.1    KL671659    KFW83277.1    NIVC01001497    NIVC01000562    PAA67289.1    PAA80859.1    AAQR03124421    AAQR03124422    AAQR03124423    AAQR03124424    KQ414632    KOC67184.1    RJVU01007007    ROL54128.1    REGN01009984    RMZ99943.1    KN123762    KFO23547.1    AMQN01001459    AMQN01001460    KB302615    ELU04135.1    HAAD01003158    CDG69390.1    AGTP01058535    AGTP01058536    KB523138    EMP37103.1    AHZZ02003175    AHZZ02003176    AHZZ02003177    AHZZ02003178    AHZZ02003179    AB168617    MRZV01000039    PIK61163.1    MRZV01000540    PIK48108.1   
Pfam
PF02493   MORN
Interpro
IPR003409   MORN       

Ontologies

GO

Topology

Length:
253
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.10838
outside
1  -  253
 
 

Population Genetic Test Statistics

Pi
182.908994
Theta
178.035196
Tajima's D
0.108634
CLR
4.839994
CSRT
0.406229688515574
Interpretation
Uncertain
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