Pre Gene Modal
BGIBMGA006617
Annotation
PREDICTED:_zinc_finger_CCHC_domain-containing_protein_8_homolog_[Amyelois_transitella]
Location in the cell
Nuclear Reliability : 3.968
Sequence
CDS
ATGGACGATGACGACGGGGGTGAGGGCTTCAGCTCCGCCCCTGTGTCCGCTCCCAAAATAATGGGAAAACGAAGATTGACCTCATCTGAATACGACGAAAGCCGCAAAATAAAAATGACTTTCATTAAAAATAAGCGCGGTCTTTTTAAAGACCACCATGCTCTATATGAAGACCTTACAAAAAAAGAATATCCAGTGCTTCTTCAGTCAAGCCTCTCGCAACCAAATAACAGAGTCCCAATGGACCTGTTAAGAATAAACAAAACTTTAAAAAATGTTGAAGGGGTACAGTATGTCAAAGCTGCTGGAAACTTTTTTGCTAAAGTTTACTTTGGCTGTGCTCGGGATGCCAACGCTTTTTTATTAGATGTAAGCTTTATGGAGTTAAACAATTGGACAGCAAAAATACCTTACGATAGCATTGAGAGTCAAGGAATTATTCGAGCTCCTGTGGAATTAGATGAAGAATCTCTTTTAGTAAATTTAAAAGCTACATGCACAATACTCGGAGTAAAAAGATTTTTCAAAAAACAAGAAAATGGAAGTGACAAGCCACTGCAAACTGTGCTGGTTACATTTTTGGCGTCTAGCCATCCTGATCATGTCACATACGAGCATATTTGGATGCCTGTTTCGGATTATATTAGACCTGTGTTACAGTGCTTCAAATGCTACAAATTTGGACATGGAAGTGGTGCCTGTAAAGCCACTCAAGTTTGCTCTATTTGTTCAGGCAATCATTTTTATAGGGAGTGCAGCACTCCCAACATCTTCAAGTGCTCCAACTGCAGTGGGCCACATTCTGCAGTTTCTTACTCTTGCTCAGTAAAGGCAGCCAAGGTTGCTGAAGTAAAAAATAAGATTATCGGCAAGCAAACATCATACGCAGCCATACTAAAGAATCCTGTAATTAAGAACCCCGTGACCTCTTCTGGCATACCTATATCTGCGAAGACCCCTCAAGATTTTGATCTTTCGTGGAAAACTCATATTGATGTTATTTGTAAAAGAGCTGAATTAGGTTTGAATATATTAAAATCGCTAACTGGAGTAAAATGGGGAGCTGATCCCAAAGTTTTAAAAACTATTTACATTGCAACAATCCGAAGCCATTTCGATTATGGCAGTCACTCTGGTATTGTGGGTAATGAATTTGTTGATAAATTAGCCAAATCTACAAAAGATATAAATATTTCCGATTTTAAAGTTCCGTACTCAGATTTAGTTTATTCAATTAAACAAAATATGATGAAACGTTGGAAGACTGGTGTCAAAGATATCATTTATGAATTAGACAATGAGGATCTCGAACTCAGCAGTGAAGATGACGTTTTGGAGACAAAAATAAGGCGTTTAGATACTGATGTAGTGCCTTATTCCGCTGAAAGCGATTGTGTTATCCAGGAAACACCTGTAGACGTTATAAATATTGACAGTTCGTGCGAGGATGCTGGAGAAAACAATGCTGATGAAAAAGAGGGAAATGGAGGGAAAATAACGAATCAACCCTTGAGATCTAATGACAACTCTAGTGAACTATATACAATATGTGTAGATGAAGACTTAGGTACTGAAGAAAGCACTAAAATTTTTAATGATGATATTTCTGTAGACACTCCTACATCGAATAGCGACGGTAGTGTAGTAGGCTGTGTAAACAGGACACCTCTTGTGAGCGTTCAGTTTAGAGACAAAAAACTGGCTAGTAGCTACAAGCAAAAAGTAAAAGCGTTTATGCTGAAACTTATAAAGATTCATAATGACGATGCATTAGAAGGTTCAGAATGTGAGACAGACTTAGAACTTGACATTTGGCCAGAAGATGTTGTTGAGGAACTTCCTAAACAAGAGGAAGTGAAGACTGTAGATGATAGTCTCTTCTTTGTTGATACAGATCCAAGTGTGAATTGTGCTATTGAAGAAATACCTAGATACAGTGAGGGATCAAACTTAATATCAGATAATGTGGAAACAGAGTTGCCATTGAATTCAGTCCGCCCGTTAAAACGAGGTCCAATTTGTTTTAATTGTGATGGTAGCCATGCTTTGAGAGAATGCAAACAGCCTAGAGATGCAATTCGAATAGCCGAACAACGGCGTAATTTCACGAAGGTTGGCCGTTACCATGTGGAAGATGAACAAAAGTATGGGCACTTGGTGCCTGGCCGTATTTCTGGACAACTTCGACACGCATTAGGTTTGAAGAGACACGAATTACCAATGCATATTTATCGCATGAGGGTGTTGGGGTATCCGCCAGGATGGCTAGAGGAAGCTCGGATATCACATTCTGGAATAACAATGTTTGATTCTTCTGGTAATCCAATAACAGAACTTGACGAGGAAGATGGTGAAGTATGCGAGCCTGGTTCTAAAGACAAGTTTGATATTAAAAAGATCTACGACTTCCCTGGTTTCAATGTTCCCGCCAGTTCTAGATACAAAGAGGAAGGCGAACAATTCGGCTTCCCATCCTTGTCCTTACAGGACAGTAAAATAGCAATGCTGCAAAATTTGGCTCCAAATGCGATGAAGGCTTACAAACGGAAGAAACTTACTTTCTTTCCCTCATCAAATTTGGAAAAACCTGAAGGCGAAGCTGAAATGGAACTCGACAGCGGAGATGAGGAGATAGCGTTTCCGACTGTCCCTCCGTTACCAGACGAGATGCCTCCTCCTCCTCCCCCTCTACCGCCTTCCCCGCCGCCACCTCCGCCGCCACATACACAAACAGATATGGAGGAAAAAATAAAAACATTGAATGAAACACAGAACGTATCAATTAGTGACCCCGTAACAGCTACAGATGAAATAGAAATATCGAATACTTCTAATGGCCGCTATAGTCCGAGTATCGAAGATCTAGAAGCAAAGAAGAAGTTATTATTAGAGGTCATTGAAAATGAAAATGAAGTTGCAAATGAGGAAGCTGCACAAGACGTAGAAATTCAGAATGAAAGTAATAATGGAATCGACGCAGAAAATAAGGAGAAAGAAGTCATCGCTGTTGAAAATGTAACATCTAACAATGATGCCGGGAGAGTTCCAACACCGAACTCAGTATTAAGCGATGAGAAATCATCATTGACACCGCGACCGGCTAGAGAGGTCGTCGAGAAAGAGCAAGCGCGTTCAGAGGACAACAGAGATCAAATCCTCACTCCCAAACGCGACACAACTTGTAGCAGTAATGACGAAACGCCGACTACTACAGCTGGTAGTGACACCGATGTATTGAAAACACCAGACGCACAGCAAACAGGTCGAGTGAAGACCACGGACTACGGCACTCCGGTCCTCAACATCGCGTCTCCTTACCGCAAGCTACCGAGCGGGACCAAATTCGCCAAAGACATCTGTGACGTTTTATATTTCGAAAACCTGCCAAATTCGACGGGAAATTATAAAAAAATGACCACCCTGCTCAAGAAAGTTAAAGACGAAGTTGACAGGATACAAGATTCATGA
Protein
MDDDDGGEGFSSAPVSAPKIMGKRRLTSSEYDESRKIKMTFIKNKRGLFKDHHALYEDLTKKEYPVLLQSSLSQPNNRVPMDLLRINKTLKNVEGVQYVKAAGNFFAKVYFGCARDANAFLLDVSFMELNNWTAKIPYDSIESQGIIRAPVELDEESLLVNLKATCTILGVKRFFKKQENGSDKPLQTVLVTFLASSHPDHVTYEHIWMPVSDYIRPVLQCFKCYKFGHGSGACKATQVCSICSGNHFYRECSTPNIFKCSNCSGPHSAVSYSCSVKAAKVAEVKNKIIGKQTSYAAILKNPVIKNPVTSSGIPISAKTPQDFDLSWKTHIDVICKRAELGLNILKSLTGVKWGADPKVLKTIYIATIRSHFDYGSHSGIVGNEFVDKLAKSTKDINISDFKVPYSDLVYSIKQNMMKRWKTGVKDIIYELDNEDLELSSEDDVLETKIRRLDTDVVPYSAESDCVIQETPVDVINIDSSCEDAGENNADEKEGNGGKITNQPLRSNDNSSELYTICVDEDLGTEESTKIFNDDISVDTPTSNSDGSVVGCVNRTPLVSVQFRDKKLASSYKQKVKAFMLKLIKIHNDDALEGSECETDLELDIWPEDVVEELPKQEEVKTVDDSLFFVDTDPSVNCAIEEIPRYSEGSNLISDNVETELPLNSVRPLKRGPICFNCDGSHALRECKQPRDAIRIAEQRRNFTKVGRYHVEDEQKYGHLVPGRISGQLRHALGLKRHELPMHIYRMRVLGYPPGWLEEARISHSGITMFDSSGNPITELDEEDGEVCEPGSKDKFDIKKIYDFPGFNVPASSRYKEEGEQFGFPSLSLQDSKIAMLQNLAPNAMKAYKRKKLTFFPSSNLEKPEGEAEMELDSGDEEIAFPTVPPLPDEMPPPPPPLPPSPPPPPPPHTQTDMEEKIKTLNETQNVSISDPVTATDEIEISNTSNGRYSPSIEDLEAKKKLLLEVIENENEVANEEAAQDVEIQNESNNGIDAENKEKEVIAVENVTSNNDAGRVPTPNSVLSDEKSSLTPRPAREVVEKEQARSEDNRDQILTPKRDTTCSSNDETPTTTAGSDTDVLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPSGTKFAKDICDVLYFENLPNSTGNYKKMTTLLKKVKDEVDRIQDS
Summary
Uniprot
ProteinModelPortal
PDB
5LXY
E-value=6.15475e-06,
Score=124
Ontologies
GO
Topology
Length:
1155
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00125
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00006
outside
1 - 1155
Population Genetic Test Statistics
Pi
211.025397
Theta
189.624165
Tajima's D
0.502042
CLR
0.0021
CSRT
0.512924353782311
Interpretation
Uncertain
