SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05505  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006620
Annotation
PREDICTED:_ankyrin_repeat_and_MYND_domain-containing_protein_2_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.715
 

Sequence

CDS
ATGGAGACCAAAAACGATGAAAGCACGTCTTCGGAAAAAACTATATTTGATGCTATCGCTCAGGGAGACTTGACTGAATTTTCAAATATTTTGACTCAACACAAAGGCGACGTAAATTTCTTTGACGAAAATGGTATGACTGCTTTACAACACGCGGCCTATAAAGGGAACAAGGATATGGTGCAATTACTGCTCGATAGGGGAGCGGACGTGAATTCTGGAAAGCACGAGTATAACTACACAGCGTTACACTTTGGTGCTCTGTCTGGTAGCTCCGAAGTATGCAAACTGCTACTCGATGCTGGGGCCAAACCTACAGCCACAAATTCGGTGGGGCGCACCTCTGCGCAGATGGCGGCATTTGTCGGAAATCATCACACAGTTGCAACTATCAACAACTACATACCTCGTAGTGAAATTGAATATTATTCTATCCCACAAGGACTCCAACAAGAACCTTATCTACCTCCAATCTTAGTAGATCCAGTTCATAAATTTGTACTAGGAGTAAATATTCATCCTGTAAGATTAGCTTTGAATTTGCAACATGCTCCTGCTTTGTTAGAAAATGCTGACAAAGCGAGCAAGACTTTAGAAATGCTGAGCAAACGCGAGATGACAAGAGGCAGTGAAACCAATGAAGTGATGGCTTTCAAGTACCATTATTTATCATATATCCTACGAGAAATACACAACATCAAAGATAAACAGAAACCATCAGAGAAGGAAGAAAAGAAGCATGATGTTGTTGAAATATTTGCTAAAAAACTCTTGAAGCCAGGTAAAGATGGTGTTTCCCTTGACCTCATGGATTCCTTCCTTAAAGACTGTGTGAGGGAATTCCCATTCAGGGAGTGCACAACATTCCATCAAATGGTCACAGCCTTGACAAGTAAAGATCCACCGACAGCCTTGTCAGTTATAAACTGTACCATTAATGGGCAGAGAGGGTTTTTGGATGCCATACCATACTGCAGTTCTTGTGGTGAAGAGAAGCCCGCAAAGAAATGTTCCAAGTGTAAATCAGTACAATATTGTGATAGGGAGTGTCAGAGATTGCACTGGTTTGTGCACAAAAAAGCCTGCAACAGAGAGTCCAGTGCTCCGGCACCAACTGTTAATTCCAAAATAAATATTGACGCCAATGAATTGAGTTCGGAGCTTCAAAATCTTATAGCTGGCTGA
Protein
METKNDESTSSEKTIFDAIAQGDLTEFSNILTQHKGDVNFFDENGMTALQHAAYKGNKDMVQLLLDRGADVNSGKHEYNYTALHFGALSGSSEVCKLLLDAGAKPTATNSVGRTSAQMAAFVGNHHTVATINNYIPRSEIEYYSIPQGLQQEPYLPPILVDPVHKFVLGVNIHPVRLALNLQHAPALLENADKASKTLEMLSKREMTRGSETNEVMAFKYHYLSYILREIHNIKDKQKPSEKEEKKHDVVEIFAKKLLKPGKDGVSLDLMDSFLKDCVREFPFRECTTFHQMVTALTSKDPPTALSVINCTINGQRGFLDAIPYCSSCGEEKPAKKCSKCKSVQYCDRECQRLHWFVHKKACNRESSAPAPTVNSKINIDANELSSELQNLIAG

Summary

EMBL
BABH01008498    ODYU01009490    SOQ53965.1    NWSH01004992    PCG64516.1    RSAL01000201    + More
RVE44441.1    JTDY01000624    KOB76427.1    KQ459984    KPJ19037.1    AGBW02011059    OWR47288.1    KQ458793    KPJ05062.1    KK853689    KDQ97281.1    NEVH01002992    PNF41020.1    CH477294    EAT44469.1    LBMM01000904    KMQ97244.1    KQ982911    KYQ49329.1    GL762384    EFZ21610.1    GL888066    EGI68378.1    KQ980824    KYN12562.1    KQ976511    KYM82528.1    KQ981280    KYN43462.1    ADTU01023471    GFDL01012930    JAV22115.1    GL435030    EFN74190.1    GEZM01063239    JAV69169.1    PYGN01000408    PSN46894.1    DS231892    EDS44089.1    APCN01004624    AAAB01008948    EAA10489.4    GFDL01012961    JAV22084.1    KK107154    QOIP01000001    EZA56882.1    RLU27540.1    GFDF01010560    JAV03524.1    GANO01002461    JAB57410.1    JRES01001499    KNC22436.1    GAPW01001600    JAC11998.1    JXUM01042966    KQ561345    KXJ78877.1    KQ971645    EFA12348.2    KQ435763    KOX75414.1    KYB24780.1    KQ976885    KYN07474.1    CCAG010016060    EZ423634    ADD19910.1    KQ414668    KOC64576.1    JXJN01010368    KQ434782    KZC04541.1    AXCM01008080    KZ288311    PBC28481.1    KA648213    AFP62842.1    GL445930    EFN88764.1    ATLV01022898    KE525337    KFB48077.1    FJ710566    ACN91524.1    GAMC01001782    JAC04774.1    GEDC01031102    JAS06196.1    GEDC01025676    GEDC01016702    JAS11622.1    JAS20596.1    GBYB01003190    JAG72957.1    CVRI01000035    CRK92769.1    BT127211    KB632257    AEE62173.1    ERL90775.1    APGK01050139    KB741166    ENN73381.1    GGFK01007555    MBW40876.1    GGFK01007603    MBW40924.1    GGFJ01005810    MBW54951.1    NNAY01001399    OXU24108.1    GBXI01001310    JAD12982.1    GGFL01004991    MBW69169.1    GGFL01004992    MBW69170.1    GBXI01005497    JAD08795.1    GAKP01004716    JAC54236.1    KQ761824    OAD56760.1    GDHF01015172    JAI37142.1    AXCN02000980    CH933809    EDW19522.1    UFQS01001299    UFQT01001299    SSX10167.1    SSX29888.1    CH379069    EAL29517.2    GEBQ01009292    JAT30685.1    CP012525    ALC43723.1    OUUW01000002    SPP76705.1    CH902618    EDV40635.1    CH916366    EDV96919.1    CH940647    EDW70201.1    CM000159    EDW94030.1    CH964161    EDW80035.1    GDAI01002933    JAI14670.1    CH954178    EDV51322.1   
Pfam
PF12796   Ank_2        + More
PF01753   zf-MYND
PF00023   Ank
PF00498   FHA
PF00069   Pkinase
PF06462   Hyd_WA
PF00337   Gal-bind_lectin
PF06398   Pex24p
PF13606   Ank_3
Interpro
IPR002110   Ankyrin_rpt        + More
IPR002893   Znf_MYND       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR000253   FHA_dom       
IPR000719   Prot_kinase_dom       
IPR008984   SMAD_FHA_dom_sf       
IPR017964   DNA-dir_DNA_pol_B_CS       
IPR013320   ConA-like_dom_sf       
IPR006624   Beta-propeller_rpt_TECPR       
IPR006614   Peroxin/Ferlin       
IPR001079   Galectin_CRD       
IPR010482   Peroxin       
IPR009091   RCC1/BLIP-II       
IPR002645   STAS_dom       
SUPFAM
SSF48403   SSF48403        + More
SSF56112   SSF56112       
SSF49879   SSF49879       
SSF49899   SSF49899       
SSF50985   SSF50985       
Gene 3D
PDB
4GPM     E-value=2.55393e-12,     Score=174

Ontologies

Topology

Length:
394
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00189
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02370
outside
1  -  394
 
 

Population Genetic Test Statistics

Pi
222.840614
Theta
215.984211
Tajima's D
0.049513
CLR
0.593694
CSRT
0.385580720963952
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号