Gene

KWMTBOMO05479  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006709

Annotation

PREDICTED:_thioredoxin_domain-containing_protein_17-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr10(+):3055411-3057785      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.292

CDS

ATGGTTATTAACGTGGATCTAAAAGGTTTTGAAGAATTTTCGAAATATACTCGTGCAATTGATTCTCGTGGTCCCCCTGTATTTTTTTACTTTAGCGGTTCAAAACTACCTGATGGCAATAGCTGGTGCCCCGACTGCGTGGAAGCTGAACCAGTCGTCAGGCATTACCTTAGTGAGCTCGACAAAAGTATCATTTTTGTCTATGTCGATGTTGGAGATAGAGAATATTGGAAGGACAAAGAGTGCCCGTTCAGAACGGACAGTCGCTCTAAGTTGATGGTCATACCGACTTTAATAAAATGGAAGGGAGTACAGAGGCTTGAGGGAAGCCAGTGCAGCAATCGGGAACTTCTGCAGATGTTGTTCGAAGAAGAAGATTAA

Protein

MVINVDLKGFEEFSKYTRAIDSRGPPVFFYFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLFEEED

Uniprot

H9JB14   A0A3S2NS99   A0A212FEU2   S4PI80   A0A194QHM1   A0A194RSL2   + More
A0A2A4JB74   A0A0K0WTM1   A0A1E1WI61   A0A2H1VFA7   U5EK99   A0A1B0FPP7   A0A0L0CMC8   A0A0K8TNN5   V5GMV8   A0A1A9WKI2   A0A1A9VCC8   A0A1B0C1L8   A0A1A9Z7Z2   A0A1I8M158   A0A1A9XER9   A0A1Y1M931   A0A1A9X4U6   T1PFD3   D3TRX8   Q29NV0   B4P062   A0A1W4UHY6   A0A1Y1M1X6   A0A1Y1M6A0   A0A0C9QTK1   B4I1G5   B4Q3M1   A0A0J9QX63   B3N4W5   A0A0A1WWC4   A0A0Q5WGH9   A0A1L8DUB6   W8C3U6   A0A3B0K2R2   Q9VMQ9   A0A0M4ES68   B4MVJ2   B4KF30   B4LU19   A0A1I8PYG0   E9HMQ5   A0A0M4E385   A0A0N7ZDK8   A0A034VEI5   A0A0C9S0U9   A0A2R2YWV6   A0A182SLD6   B3MMY8   A0A1L8EIJ0   A0A1B0CZ90   A0A0K8VIG0   B4JAF9   A0A1W4WB29   A0A182K0G8   A0A182LYS8   A0A182R3S8   A0A182Q9I7   A0A1D6TL39   Q7Q1K7   A0A1D6TE11   A0A182P4Q6   A0A182XN80   A0A1S4H2T2   A0A182U4B1   A0A182V7S4   A0A182KU46   A0A182HRY0   A0A2M4C3G1   A0A182NBQ6   A0A2M3ZIM4   A0A182Y0M8   A0A182WGI2   A0A084WU38   A0A2M4C313   A0A182IVW6   W5JIF9   A0A182IZQ1   A0A2M4ARS7   A0A182F0Y0   A0A386R1D6   A0A0L7R8T5   A0A1L8DDS1   A0A1B0DL01   A0A1L8DCV6   A0A1L8DCV9   T1E849   A0A0A1WVH2   A0A139W9N0   A0A0M8ZPQ4   Q1HQU6   A0A2J7PD52   A0A154PNB0   A0A182H535   A0A1Q3FYI8  

Pubmed

19121390    22118469    23622113    26354079    26108605    26369729    + More
25315136    28004739    20353571    15632085    17994087    17550304    22936249    25830018    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21292972    25348373    12364791    20966253    25244985    24438588    20920257    23761445    18362917    19820115    17204158    17510324    26483478   

EMBL

BABH01008443    RSAL01000267    RVE43237.1    AGBW02008896    OWR52275.1    GAIX01005500    + More
JAA87060.1    KQ458793    KPJ05043.1    KQ459984    KPJ19056.1    NWSH01002033    PCG69357.1    KP771808    AKS26495.1    GDQN01004351    GDQN01003183    GDQN01001704    JAT86703.1    JAT87871.1    JAT89350.1    ODYU01002242    SOQ39461.1    GANO01001890    JAB57981.1    CCAG010008058    JRES01000186    KNC33503.1    GDAI01001601    JAI16002.1    GALX01005554    JAB62912.1    JXJN01024136    GEZM01042467    JAV79837.1    KA647482    AFP62111.1    EZ424180    ADD20456.1    CH379058    EAL34544.1    CM000157    EDW88927.2    GEZM01042474    JAV79834.1    GEZM01042475    GEZM01042472    JAV79835.1    GBYB01007044    JAG76811.1    CH480820    EDW54372.1    CM000361    CM002910    EDX03825.1    KMY88303.1    KMY88304.1    CH954177    EDV57867.1    GBXI01011351    JAD02941.1    KQS70181.1    GFDF01004074    JAV10010.1    GAMC01005899    JAC00657.1    OUUW01000006    SPP82180.1    AE014134    AY060849    AY113391    AF503572    KX531732    AAF52253.1    AAL28397.1    AAM29396.1    AAN03825.1    AGB92634.1    AGB92635.1    ANY27542.1    CP012523    ALC40125.1    CH963857    EDW75712.1    CH933807    EDW13013.2    CH940649    EDW65072.1    GL732689    EFX66964.1    ALC38034.1    GDRN01031019    JAI67528.1    GAKP01018430    JAC40522.1    GBYB01014236    JAG84003.1    KR006967    AMK05619.1    CH902620    EDV31013.2    GFDG01000370    JAV18429.1    AJVK01002143    GDHF01013630    JAI38684.1    CH916368    EDW03830.1    AXCM01001134    AXCN02000684    AAAB01008980    EAA14229.2    APCN01001775    GGFJ01010570    MBW59711.1    GGFM01007643    MBW28394.1    ATLV01026995    KE525421    KFB53732.1    GGFJ01010569    MBW59710.1    ADMH02001427    ETN62579.1    GGFK01009977    MBW43298.1    MH143602    QCYY01001515    AYE56135.1    ROT77504.1    KQ414632    KOC67181.1    GFDF01009604    JAV04480.1    AJVK01068838    GFDF01009791    JAV04293.1    GFDF01009792    JAV04292.1    GAMD01003073    JAA98517.1    GBXI01011884    JAD02408.1    KQ972166    KYB24618.1    KQ435922    KOX68565.1    DQ440348    CH477855    ABF18381.1    EAT35597.1    NEVH01026394    PNF14252.1    KQ434998    KZC13322.1    JXUM01110751    KQ565441    KXJ70971.1    GFDL01002503    JAV32542.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000053240    UP000218220    + More
UP000092444    UP000037069    UP000091820    UP000078200    UP000092460    UP000092445    UP000095301    UP000092443    UP000001819    UP000002282    UP000192221    UP000001292    UP000000304    UP000008711    UP000268350    UP000000803    UP000092553    UP000007798    UP000009192    UP000008792    UP000095300    UP000000305    UP000075901    UP000007801    UP000092462    UP000001070    UP000192223    UP000075881    UP000075883    UP000075900    UP000075886    UP000076407    UP000007062    UP000075902    UP000075885    UP000075903    UP000075882    UP000075840    UP000075884    UP000076408    UP000075920    UP000030765    UP000075880    UP000000673    UP000069272    UP000283509    UP000053825    UP000007266    UP000053105    UP000008820    UP000235965    UP000076502    UP000069940    UP000249989   

PRIDE

H9JB14    Q9VMQ9   

Pfam

PF06110   DUF953

Interpro

IPR010357   DUF953_thioredox        + More
IPR036249   Thioredoxin-like_sf       
IPR001510   Znf_PARP       

SUPFAM

SSF52833   SSF52833       

ProteinModelPortal

H9JB14   A0A3S2NS99   A0A212FEU2   S4PI80   A0A194QHM1   A0A194RSL2   + More
A0A2A4JB74   A0A0K0WTM1   A0A1E1WI61   A0A2H1VFA7   U5EK99   A0A1B0FPP7   A0A0L0CMC8   A0A0K8TNN5   V5GMV8   A0A1A9WKI2   A0A1A9VCC8   A0A1B0C1L8   A0A1A9Z7Z2   A0A1I8M158   A0A1A9XER9   A0A1Y1M931   A0A1A9X4U6   T1PFD3   D3TRX8   Q29NV0   B4P062   A0A1W4UHY6   A0A1Y1M1X6   A0A1Y1M6A0   A0A0C9QTK1   B4I1G5   B4Q3M1   A0A0J9QX63   B3N4W5   A0A0A1WWC4   A0A0Q5WGH9   A0A1L8DUB6   W8C3U6   A0A3B0K2R2   Q9VMQ9   A0A0M4ES68   B4MVJ2   B4KF30   B4LU19   A0A1I8PYG0   E9HMQ5   A0A0M4E385   A0A0N7ZDK8   A0A034VEI5   A0A0C9S0U9   A0A2R2YWV6   A0A182SLD6   B3MMY8   A0A1L8EIJ0   A0A1B0CZ90   A0A0K8VIG0   B4JAF9   A0A1W4WB29   A0A182K0G8   A0A182LYS8   A0A182R3S8   A0A182Q9I7   A0A1D6TL39   Q7Q1K7   A0A1D6TE11   A0A182P4Q6   A0A182XN80   A0A1S4H2T2   A0A182U4B1   A0A182V7S4   A0A182KU46   A0A182HRY0   A0A2M4C3G1   A0A182NBQ6   A0A2M3ZIM4   A0A182Y0M8   A0A182WGI2   A0A084WU38   A0A2M4C313   A0A182IVW6   W5JIF9   A0A182IZQ1   A0A2M4ARS7   A0A182F0Y0   A0A386R1D6   A0A0L7R8T5   A0A1L8DDS1   A0A1B0DL01   A0A1L8DCV6   A0A1L8DCV9   T1E849   A0A0A1WVH2   A0A139W9N0   A0A0M8ZPQ4   Q1HQU6   A0A2J7PD52   A0A154PNB0   A0A182H535   A0A1Q3FYI8  

PDB

1V9W     E-value=2.14114e-24,     Score=271

KEGG

101742990    no KO assigned | (RefSeq) thioredoxin domain-containing protein 17-like

GO

GO:0008270   GO:0003677   GO:0016787   GO:0006726   GO:0047134   GO:0005829  

Length:

126

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09589

outside

1  -  126

 

 

Pi

163.815622

Theta

149.58305

Tajima's D

0.338071

CLR

0

CSRT

0.467526623668817

Interpretation

Uncertain