Gene

KWMTBOMO05471

Pre Gene Modal

BGIBMGA006706

Annotation

PREDICTED:_rabenosyn-5_[Papilio_xuthus]

Location

Bomo_Chr10(+):2985161-2988926      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.455

CDS

ATGGCAACGGCCAACGACGATGAAATTCTTGAGGGCTTCTTGTGTCCCATATGTAAAGCAGATCTCAAATCCGCCTCACAACTAACAAATCATTTCGAAAGTCTTCATCAAGAAGATCAAGATGTTTTGAAATCATTAAAAGACATTTTTGGTAAAGCAAAGACAATAATACTGAATAATGACAATGCTGATTTGAAAGAGACATTCGCGCGTGCTTTGAAGTTTAATTACCAAGATTATTATGATGAAGAGCAGGTGATCGGAGTATCACGTAGTTCAACCGATTACTTTAAGGGTGTGAGGTTTTCCAGGCTTGAAAGATACGCTACGGAGACTAATAAGCTGTTGATTCGGTTGGATAAACTCATTTGTAACATGCCAAGTGACCCTCATCAAAGAAAAATTCATGAGCAAGATGCTGTGCCATGGTTAGATGGTTCATCAGTTAATCTGTGTCCCAACTGTGCGAAACCCTTTCACTTGACACGCAGGCAACATCATTGTCGACTATGTGGCTCCATACTATGTCATGACTGCTCTGTTTTTCTAGATATTGAAGTAGCTAAAACTATTATAAATCCATCAGCTCCAAAACCAGTATCAAATCCGGAACTAAAGCTAACAGAGAAGAATGGATTACGTCTCTGTGAACATTGTTACAATTTGATCAAACTGCGGAAACAAGTGCAAGAAACAAGAAACACAAAGACTGAACTCGTAACGGCCTATGAAGAGATGAGGAGTCTTATGGAGCAAGCCAAACCAGCTGTTGCTATGTATGAAAAGATGTGCCAAAGTCTCTTTGATGGTGAAACAACCTACAATATGTCTGATGTGAATGCAATGCGAGGTCGTATAGGGAAGTTGGCTGAAGGCATAGACTTGCTGAGTAAGCAGATAGTCAGCTTCCCGGCAGAGCCTGGCACAAGGCAAGCCAGGCTACAGAATGCTATAAGGCAAGCTGCAGGACATTATATTAAGGAAGACTTACTGTCCTTAAGGAAGCTCCCGACCGAAGCTCAGATCGAGGAGGTGCGTCGTCAGCGCTACGAGCGTGCCGAGAAACAAATACAAATGGAGCGGGAACGTATGGAGCGCGAGCGGCAGCGGCGGGAGGGTGCGCCCGGCGCCGCCCCACCCCCCGCCCTGACCCCCGCCGGCGCCCAGCACGACGACGACGACGACAACCCGCTGCTAGAGCAGATGAATATCATCAGGGGGTATATAAAAGAGGCGAGACAGGAACTGAGATTTGAAGAGGTGGCGATTTTAGAAGCAAACCTAAAGGAATTGAAGAAGGAATACAAATTACAGAAGCTCTCGAGCAGATCCTAG

Protein

MATANDDEILEGFLCPICKADLKSASQLTNHFESLHQEDQDVLKSLKDIFGKAKTIILNNDNADLKETFARALKFNYQDYYDEEQVIGVSRSSTDYFKGVRFSRLERYATETNKLLIRLDKLICNMPSDPHQRKIHEQDAVPWLDGSSVNLCPNCAKPFHLTRRQHHCRLCGSILCHDCSVFLDIEVAKTIINPSAPKPVSNPELKLTEKNGLRLCEHCYNLIKLRKQVQETRNTKTELVTAYEEMRSLMEQAKPAVAMYEKMCQSLFDGETTYNMSDVNAMRGRIGKLAEGIDLLSKQIVSFPAEPGTRQARLQNAIRQAAGHYIKEDLLSLRKLPTEAQIEEVRRQRYERAEKQIQMERERMERERQRREGAPGAAPPPALTPAGAQHDDDDDNPLLEQMNIIRGYIKEARQELRFEEVAILEANLKELKKEYKLQKLSSRS

Uniprot

H9JB11   A0A2A4JWZ8   A0A2H1W1S1   A0A194QJD8   A0A194RNT0   S4PI23   + More
A0A212FEZ0   A0A1C9EGE0   A0A1J1HR15   A0A0M4E6K8   B4JB25   B4LUC5   A0A1I8NXD7   A0A0K8TKD5   B4KGW0   T1PLB4   A0A1I8MVN1   Q29MW0   B4G8N0   A0A1B0GAN7   A0A1A9ZP53   B4MTY5   A0A1L8DB10   Q9VLS5   A0A3B0JIP7   B4Q6A6   A0A1A9VD90   A0A1A9Y023   A0A1B0B855   B3N710   B0W9K8   B4NWE3   A0A1W4UUK8   A0A0K8TXQ3   D6WRG2   A0A2A3E4E1   A0A1Q3F1K2   A0A310S5Z3   A0A1Q3F1U3   A0A0L7R3E3   B3MLI4   Q16I05   A0A067R220   A0A154PTB7   W8C9G8   A0A026WWQ5   A0A1B6LIM6   A0A088AIP7   A0A182HDV9   A0A195EKG5   A0A0M8ZQC0   A0A195CUR1   F4WC60   A0A151WH74   A0A1B6G9D7   A0A1B6I0K1   A0A195FSK7   A0A182FMB6   A0A195BIX7   A0A182P7W4   A0A158NA00   E2BUB6   D3TLH9   E2APF4   A0A1W4WI50   B4HYF4   A0A2M4AUV3   A0A182QL00   A0A182UPC5   A0A182QNA2   A0A182LZ36   A0A182JMS6   A0A182RBI1   A0A2M4CUS7   A0A2M4CUT0   A0A084VX06   A0A182YMY4   A0A1Y1NBS9   A0A182TL35   A0A131XW68   A0A182XLT0   Q7QFL1   A0A182IA88   A0A2S2QXP1   K7ITA2   A0A0K8SJU0   A0A0A9WGJ1   A0A146KQ84   A0A182W4N7   A0A182JSU4   A0A182N112   A0A182ND31   A0A0T6BC66   A0A1Z5KVA5   N6U9B8   U4UI66   A0A023EZH6   A0A0J7KZX0   A0A1S3D9C4   A0A069DUN7  

Pubmed

19121390    26354079    23622113    22118469    17994087    26369729    + More
25315136    15632085    23185243    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304    18362917    19820115    18057021    17510324    24845553    24495485    24508170    30249741    26483478    21719571    21347285    20798317    20353571    24438588    25244985    28004739    29652888    12364791    14747013    17210077    20075255    25401762    26823975    28528879    23537049    25474469    26334808   

EMBL

BABH01008439    NWSH01000454    PCG76306.1    ODYU01005770    SOQ46977.1    KQ458793    + More
KPJ05035.1    KQ459984    KPJ19064.1    GAIX01005575    JAA86985.1    AGBW02008896    OWR52267.1    KX778609    AON96558.1    CVRI01000019    CRK90419.1    CP012523    ALC38215.1    CH916368    EDW03917.1    CH940649    EDW64111.1    GDAI01002874    JAI14729.1    CH933807    EDW11160.1    KA649489    AFP64118.1    CH379060    EAL33583.2    KRT03965.1    CH479180    EDW28710.1    CCAG010022197    CH963852    EDW75574.1    GFDF01010554    JAV03530.1    AE014134    AY061374    AAF52609.1    AAL28922.1    OUUW01000006    SPP82247.1    CM000361    CM002910    EDX04182.1    KMY88948.1    JXJN01009836    CH954177    EDV59306.1    DS231864    EDS40233.1    CM000157    EDW88460.1    GDHF01033080    GDHF01027785    JAI19234.1    JAI24529.1    KQ971351    EFA06457.1    KZ288408    PBC26126.1    GFDL01013611    JAV21434.1    KQ769179    OAD52967.1    GFDL01013534    JAV21511.1    KQ414663    KOC65339.1    CH902620    EDV31733.1    KPU73590.1    CH478124    EAT33889.1    KK852808    KDR16038.1    KQ435207    KZC15067.1    GAMC01002164    JAC04392.1    KK107105    QOIP01000011    EZA59564.1    RLU17017.1    GEBQ01016436    JAT23541.1    JXUM01035854    JXUM01035855    JXUM01035856    KQ561076    KXJ79788.1    KQ978739    KYN28733.1    KQ435911    KOX68945.1    KQ977276    KYN04421.1    GL888070    EGI68040.1    KQ983135    KYQ47174.1    GECZ01010876    JAS58893.1    GECU01027260    JAS80446.1    KQ981305    KYN42884.1    KQ976455    KYM85064.1    ADTU01009931    GL450630    EFN80700.1    EZ422281    ADD18557.1    GL441524    EFN64699.1    CH480818    EDW52084.1    GGFK01011057    MBW44378.1    AXCN02001386    AXCN02001580    AXCM01001653    GGFL01004924    MBW69102.1    GGFL01004926    MBW69104.1    ATLV01017829    KE525195    KFB42500.1    GEZM01007093    JAV95404.1    GEFM01005341    GEGO01002156    JAP70455.1    JAR93248.1    AAAB01008846    EAA06277.4    APCN01001132    GGMS01013323    MBY82526.1    AAZX01003313    GBRD01012779    JAG53045.1    GBHO01040761    GBHO01037083    JAG02843.1    JAG06521.1    GDHC01021202    JAP97426.1    LJIG01002010    KRT84930.1    GFJQ02007970    JAV98999.1    APGK01035349    KB740923    ENN78290.1    KB632333    ERL92717.1    GBBI01004069    JAC14643.1    LBMM01001666    KMQ95921.1    GBGD01001363    JAC87526.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000183832    + More
UP000092553    UP000001070    UP000008792    UP000095300    UP000009192    UP000095301    UP000001819    UP000008744    UP000092444    UP000092445    UP000007798    UP000000803    UP000268350    UP000000304    UP000078200    UP000092443    UP000092460    UP000008711    UP000002320    UP000002282    UP000192221    UP000007266    UP000242457    UP000053825    UP000007801    UP000008820    UP000027135    UP000076502    UP000053097    UP000279307    UP000005203    UP000069940    UP000249989    UP000078492    UP000053105    UP000078542    UP000007755    UP000075809    UP000078541    UP000069272    UP000078540    UP000075885    UP000005205    UP000008237    UP000000311    UP000192223    UP000001292    UP000075886    UP000075903    UP000075883    UP000075880    UP000075900    UP000030765    UP000076408    UP000075902    UP000076407    UP000007062    UP000075840    UP000002358    UP000075920    UP000075881    UP000075884    UP000019118    UP000030742    UP000036403    UP000079169   

PRIDE

H9JB11   

Pfam

PF01363   FYVE        + More
PF11464   Rbsn

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR017455   Znf_FYVE-rel       
IPR021565   Rbsn_Rab_binding_dom       
IPR011011   Znf_FYVE_PHD       
IPR013087   Znf_C2H2_type       
IPR000306   Znf_FYVE       
IPR036531   Rbsn_Rab-bd_sf       
IPR008921   DNA_pol3_clamp-load_cplx_C       
IPR027417   P-loop_NTPase       
IPR003593   AAA+_ATPase       

SUPFAM

SSF140125   SSF140125        + More
SSF57903   SSF57903       
SSF48019   SSF48019       
SSF52540   SSF52540       

Gene 3D

3.30.40.10    

ProteinModelPortal

H9JB11   A0A2A4JWZ8   A0A2H1W1S1   A0A194QJD8   A0A194RNT0   S4PI23   + More
A0A212FEZ0   A0A1C9EGE0   A0A1J1HR15   A0A0M4E6K8   B4JB25   B4LUC5   A0A1I8NXD7   A0A0K8TKD5   B4KGW0   T1PLB4   A0A1I8MVN1   Q29MW0   B4G8N0   A0A1B0GAN7   A0A1A9ZP53   B4MTY5   A0A1L8DB10   Q9VLS5   A0A3B0JIP7   B4Q6A6   A0A1A9VD90   A0A1A9Y023   A0A1B0B855   B3N710   B0W9K8   B4NWE3   A0A1W4UUK8   A0A0K8TXQ3   D6WRG2   A0A2A3E4E1   A0A1Q3F1K2   A0A310S5Z3   A0A1Q3F1U3   A0A0L7R3E3   B3MLI4   Q16I05   A0A067R220   A0A154PTB7   W8C9G8   A0A026WWQ5   A0A1B6LIM6   A0A088AIP7   A0A182HDV9   A0A195EKG5   A0A0M8ZQC0   A0A195CUR1   F4WC60   A0A151WH74   A0A1B6G9D7   A0A1B6I0K1   A0A195FSK7   A0A182FMB6   A0A195BIX7   A0A182P7W4   A0A158NA00   E2BUB6   D3TLH9   E2APF4   A0A1W4WI50   B4HYF4   A0A2M4AUV3   A0A182QL00   A0A182UPC5   A0A182QNA2   A0A182LZ36   A0A182JMS6   A0A182RBI1   A0A2M4CUS7   A0A2M4CUT0   A0A084VX06   A0A182YMY4   A0A1Y1NBS9   A0A182TL35   A0A131XW68   A0A182XLT0   Q7QFL1   A0A182IA88   A0A2S2QXP1   K7ITA2   A0A0K8SJU0   A0A0A9WGJ1   A0A146KQ84   A0A182W4N7   A0A182JSU4   A0A182N112   A0A182ND31   A0A0T6BC66   A0A1Z5KVA5   N6U9B8   U4UI66   A0A023EZH6   A0A0J7KZX0   A0A1S3D9C4   A0A069DUN7  

PDB

1HYJ     E-value=4.40618e-08,     Score=138

KEGG

101742311    K12481 rabenosyn-5 | (RefSeq) rabenosyn-5

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0003676   GO:0046872   GO:0006897   GO:0008103   GO:0005769   GO:0034058   GO:0045451   GO:0030100   GO:0031267   GO:0001737   GO:0048227   GO:0005768   GO:0006260   GO:0003677   GO:0005515   GO:0006807   GO:0003824   GO:0044237   GO:0016627   GO:0008152   GO:0016491  

Length:

444

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00557

outside

1  -  444

 

 

Pi

343.685789

Theta

212.31735

Tajima's D

1.937536

CLR

0.001676

CSRT

0.875806209689516

Interpretation

Uncertain