Gene

KWMTBOMO05470  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006705

Annotation

PREDICTED:_tetratricopeptide_repeat_protein_27_[Amyelois_transitella]

Location

Bomo_Chr10(+):2972821-2983135      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.422

CDS

ATGTCACATGAACTATTATATCTCTGCAACTTTGATGATAATCCTGATACAATCATTGATGATAAAATCAAGAAGCTATGGTGTAATGAATGGTGTATAGAAGATGTAAACTTATGTAAAGAGTTATTTACCAGAAGGTTAGAAACAGATGAACTAAAAACTCTTCTAAAAACACAAAGTGATTATGAAAATTATTCAAGTAATATGCTGGAAATGGCTATAATTTCTCTACTAAGATATTGTGACTACAACTGGAATCCGCATCCCGAAAATTTTGATATAAATGAATTTTTTAAGAATAAATGGCCAAGTGATATTAATATTAATGAAAAAATGCAAAGAGATTCAGAACCGTTGCAAACAAATATCAGGCATGCAGAGTTATTGTATTTTTCAGATCAAATATTTAGTACTCTATCAGGTATTGAGCCAACTTATTTAAATCTATGGTGGAACTTCCGAAGTAAAGTAGCTCACCAAAGAGCATTAGAAGATACAAGTGCTACACTGTTTGCTGAACTTGAACTCATAATAGCTAAGCTTTCAAATAAAATGCAACAATTGCAAGATAAACCTCGAATTAAGTTATTATTATGTTTAGAAATAGCACAAGCATACCTCATCTATGGAAGGATTCAAAAAGTAGAGGAGTATTTACTTAAAGCAAGAGAGATTGCTGGGTTGAAGCTAGAATTGACGGGGATACTCGGCAAAAGAACAAAATATCAACAGAATGCATTACCTCAATTGGCATTAACTAGTGATCTGGATTCTACTGTTGAACGTCCCTCAGCTGAAGAGAGTCATGGTACTGCAGACTTACCAACTGATATTGAACTCCAAGATGATGTCAGACTTGATAAGATTCAATACTTGGAGAAGATCACACAAACTCAGTTGCCTAGTTTGGAGCAAACATTGTGTTTGCTGACTGTCCAGTACATACAAAAATCCCAACCTAAAGACGATTTAATGAAAGAAGAATTGCAACCGTATATAGAGGCTGTACTGTCTCAAAGGCGAGGTCCCTGGTCGACGCGGGTGGCAGCATTACTCATCAGATGTAAAATAGAAGCTAATCACAAACGCACAGTAGAACGAGCCATGCTACAATGTGAAACAATCGTTAATGAAAAGACAAACGTTTTGGGTACCACGAGATTATCATATCTCTGGGCGAGCGGTCTCCCCGCGTCATGGACGTGGCGCCAGCAGCTGGCCGACCTGTACCAGAGCCTGGGGCTCGTGAAGGCAGCACTCGAGGAGTATCAGAAACTACAACTTTGGGAAGATGTTATAGTTTGTTACACTATACTCCAACTGAGGCATAAGGCAGCAGAAGTTATACAACAACAGATTGACGCAAATCCCACGGTCAAGCTGTACTGTTTGCTGGGCGATGCTACAGACGACATTAAATGTTACGAAAAAGCCTGGGAATTTTCTGATCATAAAAGTAGCCGAGCACAGCGCCACTGGGGAAATTTTCTGTTCGATCACAAGAAGTATGAAGAATGCATACCGCATTACGAAAAGTCGGTCGAAATTAATTCCATACAAGAAAGCGTTTGGTTGAGATTGGGTTACGCAGCGCTAACGACAGAGAACTGGGAGCTGTCGGCGAGGGCGTACCGTCGATACACCTACCTCAACCCTAACTCGTTCGAGGCTTGGAACAACCTCGCCAAAGTCTACGTGAAACAGGGAGACAAGTATCGAGCGTACAGAGCCCTCATGGAAGCTCTCAGATTCAATTACGACAACTGGAAGCTGTGGGATAATGTAATTATTGTGAGTATGGACACTCTACACTTTGAGGACGTGATTCGCGGCTGTCACAGACTTTTGGATTTACAGAATAAATTTGAAGATGTAGAAGTACTGACATTGTTGGTTCGGGCCATTTTAAATGATACCAAAGACGCCGATGGAAATGGTGCTGCCAGGTTAAGGAAAAGAGTACTAGAGTTATTCGGGAGGATAACTGCTGTGCACCACAATAAACCTGACATATGGATACTGTATTCCGATATTAGTCCCACGTTTTTGTTGAAGGCACAAAGACTCATGAAAGCGTACCGGGCGTACACACAGAACGGCAACTGGCCCAACGACCCAGAGGCTTGTAAAAAGGTTATCGACCTAGCGTTATCTGTCCTCGAAACGAGTCTAAAGGCGAGACAGGAATGCGAGGACAAGGACCGGCTCCAAGCTGACCAGCAACTGTCGTCGGCTCGGCTGACGGGGCAAGCGGTGCTCAGGGCTGCCGAGAAACATAACTGGCCAGAAACACAAGACACGCTCGCGGAGCTGAGAGAAACCTTCAATGTTGTCACTGAATATATAAAATCTGTTATGTGA

Protein

MSHELLYLCNFDDNPDTIIDDKIKKLWCNEWCIEDVNLCKELFTRRLETDELKTLLKTQSDYENYSSNMLEMAIISLLRYCDYNWNPHPENFDINEFFKNKWPSDININEKMQRDSEPLQTNIRHAELLYFSDQIFSTLSGIEPTYLNLWWNFRSKVAHQRALEDTSATLFAELELIIAKLSNKMQQLQDKPRIKLLLCLEIAQAYLIYGRIQKVEEYLLKAREIAGLKLELTGILGKRTKYQQNALPQLALTSDLDSTVERPSAEESHGTADLPTDIELQDDVRLDKIQYLEKITQTQLPSLEQTLCLLTVQYIQKSQPKDDLMKEELQPYIEAVLSQRRGPWSTRVAALLIRCKIEANHKRTVERAMLQCETIVNEKTNVLGTTRLSYLWASGLPASWTWRQQLADLYQSLGLVKAALEEYQKLQLWEDVIVCYTILQLRHKAAEVIQQQIDANPTVKLYCLLGDATDDIKCYEKAWEFSDHKSSRAQRHWGNFLFDHKKYEECIPHYEKSVEINSIQESVWLRLGYAALTTENWELSARAYRRYTYLNPNSFEAWNNLAKVYVKQGDKYRAYRALMEALRFNYDNWKLWDNVIIVSMDTLHFEDVIRGCHRLLDLQNKFEDVEVLTLLVRAILNDTKDADGNGAARLRKRVLELFGRITAVHHNKPDIWILYSDISPTFLLKAQRLMKAYRAYTQNGNWPNDPEACKKVIDLALSVLETSLKARQECEDKDRLQADQQLSSARLTGQAVLRAAEKHNWPETQDTLAELRETFNVVTEYIKSVM

Uniprot

H9JB10   A0A2A4JW97   A0A2H1W1N7   A0A1C9EGE4   A0A194QI11   A0A212FET8   + More
A0A194RSM5   A0A336LPI7   B0WKB4   Q0IGA6   A0A182GH22   A0A1Q3EY78   A0A0T6BAQ2   D6W6D9   A0A0L0CK83   A0A1J1I2F7   A0A084WEJ8   A0A182IUU2   A0A182K977   A0A1W4XJ31   A0A1I8NC62   Q7Q5M4   A0A182QCR7   A0A2M4BF28   A0A182NJA9   A0A182UPB7   A0A1A9X0Y8   A0A182LL90   A0A182PEQ3   A0A182WTR4   A0A182YR29   A0A182TDJ1   A0A154P1G4   W5JNM2   A0A182WCC6   A0A3L8DIL8   A0A1Y1LCX3   A0A026VUD9   A0A1B0G2R4   A0A182HI10   A0A182FH75   A0A1I8PTS1   A0A1B0EZH0   A0A0N0U6N9   A0A1A9Y1M3   A0A1A9ZDM6   A0A1B0DP12   A0A0A1X425   A0A034WIU7   A0A1B0BNA6   A0A1A9UM31   W8BHL3   A0A182LZU6   A0A0K8WJU0   A0A182RI92   A0A158NA30   A0A151WXB5   A0A195FRK5   E2A5R3   K7IVB5   N6TWD7   U4UFW1   A0A0C9RV43   A0A0C9RHP6   A0A088ASE7   A0A1B0CT86   A0A1B6FYV2   B4L035   A0A146LE10   B4N5G5   B4J0N7   A0A1W4W522   B4LHW3   E9HMB5   Q2LZ08   A0A023EZT9   B4GZT0   B3NDB1   A0A0P5P1Q6   A0A0P5KN71   B3M3T8   B4ILX4   B4PJG7   A0A0N8AII3   A0A0P5UN93   A0A0P6J938   A0A069DZK3   T1HF61   A0A0P6DZF0   A0A0P5R2P1   A0A0P5ZP47   A0A0P5NHY5   A0A0P6IK32   A0A2A3E2K4   A0A0P5SDS6   A0A0V0G731   A0A0P5S967   A0A0N7Z9C4   A0A0P5P1D8   A0A0P5NQW3  

Pubmed

19121390    26354079    22118469    17510324    26483478    18362917    + More
19820115    26108605    24438588    25315136    12364791    14747013    17210077    20966253    25244985    20920257    23761445    30249741    28004739    24508170    25830018    25348373    24495485    21347285    20798317    20075255    23537049    17994087    26823975    18057021    21292972    15632085    25474469    17550304    26334808    27129103   

EMBL

BABH01008437    BABH01008438    BABH01008439    NWSH01000454    PCG76307.1    ODYU01005770    + More
SOQ46978.1    KX778609    AON96559.1    KQ458793    KPJ05034.1    AGBW02008896    OWR52266.1    KQ459984    KPJ19066.1    UFQT01000039    SSX18479.1    DS231969    EDS29705.1    CH477261    EAT45651.1    JXUM01011032    JXUM01011033    JXUM01011034    KQ560322    KXJ83058.1    GFDL01014887    JAV20158.1    LJIG01002573    KRT84367.1    KQ971319    EFA11387.2    JRES01000296    KNC32671.1    CVRI01000039    CRK94488.1    ATLV01023220    KE525341    KFB48642.1    AAAB01008960    EAA10837.4    AXCN02000449    GGFJ01002519    MBW51660.1    KQ434786    KZC05184.1    ADMH02000991    ETN64490.1    QOIP01000007    RLU20201.1    GEZM01063986    JAV68877.1    KK107871    EZA47362.1    CCAG010015562    APCN01005860    AJVK01059755    KQ435726    KOX78124.1    AJVK01017960    GBXI01008879    JAD05413.1    GAKP01003446    JAC55506.1    JXJN01017312    GAMC01017381    JAB89174.1    AXCM01004658    GDHF01008753    GDHF01001000    JAI43561.1    JAI51314.1    ADTU01009955    KQ982686    KYQ52311.1    KQ981305    KYN42917.1    GL437023    EFN71260.1    AAZX01013500    APGK01049588    KB741156    ENN73565.1    KB632169    ERL89481.1    GBYB01012725    JAG82492.1    GBYB01012727    JAG82494.1    AJWK01013196    AJWK01027282    GECZ01014404    JAS55365.1    CH933809    EDW19070.1    GDHC01012760    JAQ05869.1    CH964101    EDW79604.1    CH916366    EDV97892.1    CH940647    EDW70688.1    KRF85053.1    KRF85054.1    GL732685    EFX67113.1    CH379069    EAL29701.2    GBBI01003952    JAC14760.1    CH479199    EDW29507.1    CH954178    EDV51904.1    GDIQ01155756    JAK95969.1    GDIQ01207239    JAK44486.1    CH902618    EDV39272.1    CH480904    EDW55938.1    CM000159    EDW94655.2    GDIP01144073    JAJ79329.1    GDIP01114286    JAL89428.1    GDIQ01021214    JAN73523.1    GBGD01000490    JAC88399.1    ACPB03000777    GDIQ01071749    JAN22988.1    GDIQ01106333    JAL45393.1    GDIP01044643    LRGB01000512    JAM59072.1    KZS18379.1    GDIQ01164350    JAK87375.1    GDIQ01030256    JAN64481.1    KZ288425    PBC25937.1    GDIQ01097178    JAL54548.1    GECL01002225    JAP03899.1    GDIP01142929    JAL60785.1    GDKW01000939    JAI55656.1    GDIQ01136573    JAL15153.1    GDIQ01139076    JAL12650.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000002320    + More
UP000008820    UP000069940    UP000249989    UP000007266    UP000037069    UP000183832    UP000030765    UP000075880    UP000075881    UP000192223    UP000095301    UP000007062    UP000075886    UP000075884    UP000075903    UP000091820    UP000075882    UP000075885    UP000076407    UP000076408    UP000075902    UP000076502    UP000000673    UP000075920    UP000279307    UP000053097    UP000092444    UP000075840    UP000069272    UP000095300    UP000092462    UP000053105    UP000092443    UP000092445    UP000092460    UP000078200    UP000075883    UP000075900    UP000005205    UP000075809    UP000078541    UP000000311    UP000002358    UP000019118    UP000030742    UP000005203    UP000092461    UP000009192    UP000007798    UP000001070    UP000192221    UP000008792    UP000000305    UP000001819    UP000008744    UP000008711    UP000007801    UP000001292    UP000002282    UP000015103    UP000076858    UP000242457   

PRIDE

H9JB10   

Pfam

PF13181   TPR_8        + More
PF07719   TPR_2
PF13873   Myb_DNA-bind_5

Interpro

IPR011990   TPR-like_helical_dom_sf        + More
IPR019734   TPR_repeat       
IPR013026   TPR-contain_dom       
IPR013105   TPR_2       
IPR028002   Myb_DNA-bind_5       
IPR036291   NAD(P)-bd_dom_sf       
IPR002347   SDR_fam       
IPR020904   Sc_DH/Rdtase_CS       
IPR011030   Lipovitellin_superhlx_dom       

SUPFAM

SSF48452   SSF48452        + More
SSF51735   SSF51735       
SSF48431   SSF48431       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9JB10   A0A2A4JW97   A0A2H1W1N7   A0A1C9EGE4   A0A194QI11   A0A212FET8   + More
A0A194RSM5   A0A336LPI7   B0WKB4   Q0IGA6   A0A182GH22   A0A1Q3EY78   A0A0T6BAQ2   D6W6D9   A0A0L0CK83   A0A1J1I2F7   A0A084WEJ8   A0A182IUU2   A0A182K977   A0A1W4XJ31   A0A1I8NC62   Q7Q5M4   A0A182QCR7   A0A2M4BF28   A0A182NJA9   A0A182UPB7   A0A1A9X0Y8   A0A182LL90   A0A182PEQ3   A0A182WTR4   A0A182YR29   A0A182TDJ1   A0A154P1G4   W5JNM2   A0A182WCC6   A0A3L8DIL8   A0A1Y1LCX3   A0A026VUD9   A0A1B0G2R4   A0A182HI10   A0A182FH75   A0A1I8PTS1   A0A1B0EZH0   A0A0N0U6N9   A0A1A9Y1M3   A0A1A9ZDM6   A0A1B0DP12   A0A0A1X425   A0A034WIU7   A0A1B0BNA6   A0A1A9UM31   W8BHL3   A0A182LZU6   A0A0K8WJU0   A0A182RI92   A0A158NA30   A0A151WXB5   A0A195FRK5   E2A5R3   K7IVB5   N6TWD7   U4UFW1   A0A0C9RV43   A0A0C9RHP6   A0A088ASE7   A0A1B0CT86   A0A1B6FYV2   B4L035   A0A146LE10   B4N5G5   B4J0N7   A0A1W4W522   B4LHW3   E9HMB5   Q2LZ08   A0A023EZT9   B4GZT0   B3NDB1   A0A0P5P1Q6   A0A0P5KN71   B3M3T8   B4ILX4   B4PJG7   A0A0N8AII3   A0A0P5UN93   A0A0P6J938   A0A069DZK3   T1HF61   A0A0P6DZF0   A0A0P5R2P1   A0A0P5ZP47   A0A0P5NHY5   A0A0P6IK32   A0A2A3E2K4   A0A0P5SDS6   A0A0V0G731   A0A0P5S967   A0A0N7Z9C4   A0A0P5P1D8   A0A0P5NQW3  

PDB

2HYZ     E-value=6.93553e-10,     Score=156

KEGG

101742170    no KO assigned | (RefSeq) tetratricopeptide repeat protein 27

GO

GO:0016491   GO:0005515   GO:0006807   GO:0003824   GO:0044237   GO:0016627   GO:0008152  

Length:

786

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01431

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00058

outside

1  -  786

 

 

Pi

220.666775

Theta

166.072612

Tajima's D

1.435276

CLR

0.559947

CSRT

0.770661466926654

Interpretation

Uncertain