SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05460
Pre Gene Modal
BGIBMGA006639
Annotation
PREDICTED:_glutathione_S-transferase_D7-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.158
 

Sequence

CDS
ATGTTACCTACGGTATTCGGAAGCCTCCAGGAGCCCACGGCGAAGCATCTAGAAGACATCGAGTCAGCGTACGGAGTAATCGAAGCGTACCTGCGGAAGCACCACTACATCGCGACCGACCACCTCACCATAGCCGACATCGCCGTTGGCTGCACCGCATTCGCTCTAAGAGGAGTGTTGGAAATTGATGAAAACAAGTTCCCAGGTATGATAAGATGGCTTCAAATTCTGAGCGAAGTTCCGAAAATCAAGAAACATGGTGTTTCTGGTGGTGATTTACTCGCAGATATATTAAGAAAACAGTGGAAAAAGAACAAGAATGTAGAAAAAATATATGATATTGATATATCCTATGGTATATCCTAG
Protein
MLPTVFGSLQEPTAKHLEDIESAYGVIEAYLRKHHYIATDHLTIADIAVGCTAFALRGVLEIDENKFPGMIRWLQILSEVPKIKKHGVSGGDLLADILRKQWKKNKNVEKIYDIDISYGIS

Summary

Similarity
Belongs to the GST superfamily.
Belongs to the glutamine synthetase family.
EMBL
BABH01008428    BABH01008429    MH177596    AYM01168.1    KF595078    AHB18378.1    + More
ODYU01007862    SOQ51006.1    MH177581    AYM01153.1    GQ131803    ACZ73898.1    KJ468616    AIB07717.1    AGBW02008896    OWR52256.1    SOQ51004.1    KX778609    AON96571.1    AON96572.1    KF482955    AIH07579.1    NWSH01004968    PCG64545.1    KJ468615    AIB07716.1    MG992377    AXY94815.1    KF929207    AHW45905.1    MH177583    AYM01155.1    SOQ51007.1    SOQ51008.1    GCVX01000118    JAI18112.1    GQ131804    ACZ73899.1    MH177582    AYM01154.1    KM433690    AIZ46902.1    NWSH01006326    PCG63509.1    KQ458793    KPJ05021.1    AGBW02009555    OWR50525.1    KQ459984    KPJ19076.1    KX500034    ARM39004.1    AGBW02010569    OWR48264.1    GCVX01000120    JAI18110.1    GAMC01008536    JAB98019.1    AF526172    AAP75792.1    AF526170    AAP75790.1    KA646899    AFP61528.1    AF526171    AAP75791.1    EU289223    GU170399    ABX84142.1    ADP76648.1    KX500033    ARM39003.1    GAKP01007533    JAC51419.1    GFDG01001368    JAV17431.1    CH933807    EDW12554.1    GFDG01001369    JAV17430.1    AF147205    AAD54937.1    GDHF01033123    GDHF01028856    GDHF01021312    GDHF01020234    GDHF01015969    GDHF01013489    GDHF01013102    GDHF01006194    JAI19191.1    JAI23458.1    JAI31002.1    JAI32080.1    JAI36345.1    JAI38825.1    JAI39212.1    JAI46120.1    KJ468613    AIB07714.1    GDHF01000006    JAI52308.1    BABH01040727    KT852953    ALR34895.1    EF506488    ABS56976.1    KF482960    AIH07584.1    KA646898    AFP61527.1    GBXI01012944    JAD01348.1    AF147206    AAD54938.1    GBXI01017180    GBXI01001379    JAC97111.1    JAD12913.1    MH177589    AYM01161.1    CM002911    KMY94817.1    GANO01000594    JAB59277.1    GFDG01001370    JAV17429.1    NWSH01001367    PCG71518.1    JN003589    AFI99081.1    ODYU01010121    SOQ55004.1    KF482956    AIH07580.1    KA647509    AFP62138.1    MH177588    AYM01160.1    MH177584    AYM01156.1    CH480816    EDW48453.1    GEYN01000101    JAV02028.1    ODYU01008927    SOQ52931.1    CM000158    EDW91642.1    JRES01000655    KNC29542.1    CH933808    EDW08545.1    KU522309    APX61028.1    KT601144    AME15813.1    CM000362    EDX07667.1    KMY94820.1    EDX07668.1    KMY94821.1    GAKP01003198    JAC55754.1   
Pfam
PF00043   GST_C        + More
PF14497   GST_C_3
PF02798   GST_N
PF13417   GST_N_3
PF03951   Gln-synt_N
PF00120   Gln-synt_C
PF03874   RNA_pol_Rpb4
Interpro
IPR010987   Glutathione-S-Trfase_C-like        + More
IPR004046   GST_C       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR004045   Glutathione_S-Trfase_N       
IPR040079   Glutathione_S-Trfase       
IPR036249   Thioredoxin-like_sf       
IPR027302   Gln_synth_N_conserv_site       
IPR014746   Gln_synth/guanido_kin_cat_dom       
IPR005574   RPB4/RPC9       
IPR010997   HRDC-like_sf       
IPR008146   Gln_synth_cat_dom       
IPR038324   Rpb4/RPC9_sf       
IPR008147   Gln_synt_b-grasp       
IPR006590   RNA_pol_Rpb4/RPC9_core       
IPR036651   Gln_synt_N       
SUPFAM
SSF47616   SSF47616        + More
SSF52833   SSF52833       
SSF47819   SSF47819       
SSF55931   SSF55931       
SSF54368   SSF54368       
Gene 3D
PDB
3VWX     E-value=2.03986e-10,     Score=151

Ontologies

Topology

Length:
121
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.71338
Exp number, first 60 AAs:
0.70555
Total prob of N-in:
0.03315
outside
1  -  121
 
 

Population Genetic Test Statistics

Pi
142.897233
Theta
115.241556
Tajima's D
-0.661063
CLR
141.203425
CSRT
0.208989550522474
Interpretation
Uncertain
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