SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05452
Pre Gene Modal
BGIBMGA006699
Annotation
Solute_carrier_family_25_member_35_[Papilio_xuthus]
Location in the cell
Mitochondrial   Reliability : 1.848 PlasmaMembrane   Reliability : 1.525
 

Sequence

CDS
ATGGACTTCCTTGTGGGCGGTGTAGCGGGAGTGGGTGCTGGTTTCTTCAGCAACCCATTTGATGTTGTGAAGACTCGAATGCAGCTCCAAGGCGAGCTTAGAGCCAGAGGTCAGCATGCAGTCTATTACAAAAACATTCCACATGCAATGTATACAATAGTGAAACATGATGGAATAATAGCACTGCAGAAAGGTTTGGTGCCAGCTCTATGGTTTCAGTTGGTTGTTAACGGAGTAAGGCTAGGAATATACCAACAAGCAGATAACCATGGCCTTCTAAGAGACAAGCAAAACAATACTAAATTCCTAAACAGTTTACTTTTTGGATGCATAAGTGGTATGTCTGGAGCCTTCTTTGGCAGTCCATTACAGCTTGTGAAGACTCAATTGATGTCATATTCTTCGGATAAAATTGCTGTTGGCACACAACATGCTCATAATGGGATGTTCTTTGCTCTAAGTAAGATATACAAGAAGAATGGCCTATCTGGTTTATGGAGAGGAGCCCATGGAATGATGATGAGAAACTCAATAGGATCGGCTGCCCAGATATCTTCATATGCTGTATGCAAAGAATGGATGGACAATAACAACATGTTCCAACAATCAAAATACCTCTCTGCATTTGTTGCAAGCAATATCGGTGCCCTCGTGAAGACTGTATGGTTAACACCCATGGATGTTATAATGACCAGACTGTATAATCAAAACGTGGACGCTAGCGGCAATGGCGTCCTCTACAAAGGTATAATAGACTGCGCTCAGAAGATAACCAAAACTGAAGGGATCCCGGCCTTCTATAAAGATTCCGACAATTATCTACAGAAGGAACAATTTCGCAAAATGGCTGCCAGACAAGATGGCGTCGGCCGTGACGTCACAGATCTTTTGATGGGTGGAGTTTCTGCTATGTTCGCAACAATGTTCACAAACCCTATAGAGGTGGTAAAGACTAGACTTCAACTACAAGGAGAAATGAAAGCTAGAGGCCACCATGCTGTGTTTTATAAAAACGTACCTCACGGGCTGTTTGTGATAGCTAGAACTGAGGGTATGGCTGCTCTACAAAGTGGATTACCGGCTATGCTTGGGTTCCAGTTCTTTTTGAACACATTTCGGTTGGGCGTTTACCGTATCAGCGAACGACGTGGGCTAACCACGGACAAGTCGGGGCGCACTTCAATCATCAAAGGTGCAACGGCTGCGGGAATAGGTGGAGCCCTTGGATCTATAGCTGGCACCCCGTTCTTCTTGGTGAAGACGAGGCTCCAAGCTCAAGCTGCCAGGGCTATAGCTGTTGGCCACCAGCACCAGCATGCTGGCACCGCGGGGGCTTTAGCTGACATTTATAGACGAGAAGGTATTAAAGGTTTGTTCAGAGGAATCTACCCTCAAATACCGCGAGGCGCTGTGGGCAGCAGCTCGCAAATGGTCAGCTTCACCTATGCGAAAGAATGGCTTCGGGCACACGACGTGTTTGTGACGTCACCGCTGGCGCTGTCCTTCGCCGGCGCAAACCTCGGCGGCCTCGTGATGACGCTGTGCTTGAACCCTTTCGACGTTGTCGCTACTAGATTGTCTAATCAAGCTGTGGACGCCAACAACCGCGGGCGGCTGTACCGTGGGATGATCGACTGCTTCGTCAAGATGGTGAGGTCCGAAGGCGCTTCTTCCCTGTACAAGGGAGTCGGGGCCAACTACATGAGACTCGGGCCGCACACCGTCCTGCTGTTGGTGTGCTGGGACCAGCTTAAGATATTAGAAGACTACTTAAGGAAGTAG
Protein
MDFLVGGVAGVGAGFFSNPFDVVKTRMQLQGELRARGQHAVYYKNIPHAMYTIVKHDGIIALQKGLVPALWFQLVVNGVRLGIYQQADNHGLLRDKQNNTKFLNSLLFGCISGMSGAFFGSPLQLVKTQLMSYSSDKIAVGTQHAHNGMFFALSKIYKKNGLSGLWRGAHGMMMRNSIGSAAQISSYAVCKEWMDNNNMFQQSKYLSAFVASNIGALVKTVWLTPMDVIMTRLYNQNVDASGNGVLYKGIIDCAQKITKTEGIPAFYKDSDNYLQKEQFRKMAARQDGVGRDVTDLLMGGVSAMFATMFTNPIEVVKTRLQLQGEMKARGHHAVFYKNVPHGLFVIARTEGMAALQSGLPAMLGFQFFLNTFRLGVYRISERRGLTTDKSGRTSIIKGATAAGIGGALGSIAGTPFFLVKTRLQAQAARAIAVGHQHQHAGTAGALADIYRREGIKGLFRGIYPQIPRGAVGSSSQMVSFTYAKEWLRAHDVFVTSPLALSFAGANLGGLVMTLCLNPFDVVATRLSNQAVDANNRGRLYRGMIDCFVKMVRSEGASSLYKGVGANYMRLGPHTVLLLVCWDQLKILEDYLRK

Summary

Similarity
Belongs to the mitochondrial carrier (TC 2.A.29) family.
Pfam
PF00153   Mito_carr
Interpro
IPR018108   Mitochondrial_sb/sol_carrier        + More
IPR023395   Mt_carrier_dom_sf       
SUPFAM
SSF103506   SSF103506       
Gene 3D
PDB
2LCK     E-value=1.4327e-26,     Score=299

Ontologies

Topology

Length:
593
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
95.54213
Exp number, first 60 AAs:
5.80703
Total prob of N-in:
0.18175
outside
1  -  593
 
 

Population Genetic Test Statistics

Pi
181.444494
Theta
158.70278
Tajima's D
-0.873259
CLR
26.971581
CSRT
0.161841907904605
Interpretation
Uncertain
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