Gene

KWMTBOMO05447

Pre Gene Modal

BGIBMGA006697

Annotation

PREDICTED:_YEATS_domain-containing_protein_4_[Papilio_polytes]

Location

Bomo_Chr10(+):2469963-2471967      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.31

CDS

ATGAGCCTTACGACAGATTTCGGGCCAGATTCTGGCGGCCGTGTGAAGGGTCTAACAATAGTAAAGCCTATAGTTTACGGTAATATAGCCCGTTACTTCGGCAAGAAACGCGAAGAGGATGGACACACACATCAATGGACTGTTTATGTAAAACCTTACGCAAACGAGGATATGTCGACTTACATCAAAAAAGTTCACTTCAAACTTCACGAAAGCTACGCGAACCCCAATAGGATCGTGACCAAGCCCCCTTACGAACTCATGGAGACTGGTTGGGGAGAGTTCGAGATCGTTATAAAGTTATACTTTCATGATCCCAATGAAAGACCACTTACTCTATACCACATACTGAAATTATTCCAATCGCCAGTCACTGAAGGTACTCCCCCAACATTTGGACATGCTCTCGTCAGTGAATCTTATGAGGAGATAGTATTCCAAGAACCAACTCAACTAATGCAGCATCTGTTAAAGAATGTCAGACCAATTACGAATGGACATTGGAAACATGACACGGACTTTGAAGAGAAGAAAGAGAAGACTTTAGAAAGAATAATAGAAGCTCAAACAAAAGTGAGGACAGAGATATCAGAGCTGAAAGAGAAACTTAGTCTTGCAAAGGAAACCATAGCTAAGTTCAAGGAAGAAATTGCCAAACTACAGAATAGTTCAGGGAACAATATAATGATGTAA

Protein

MSLTTDFGPDSGGRVKGLTIVKPIVYGNIARYFGKKREEDGHTHQWTVYVKPYANEDMSTYIKKVHFKLHESYANPNRIVTKPPYELMETGWGEFEIVIKLYFHDPNERPLTLYHILKLFQSPVTEGTPPTFGHALVSESYEEIVFQEPTQLMQHLLKNVRPITNGHWKHDTDFEEKKEKTLERIIEAQTKVRTEISELKEKLSLAKETIAKFKEEIAKLQNSSGNNIMM

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

H9JB02   A0A2H1V376   A0A2A4J341   A0A1E1WAA2   A0A194RNK2   A0A1C9EGF5   + More
A0A194QHI5   A0A3S2NX48   A0A212FEQ9   A0A1Q3EZ26   B0VZZ6   A0A182JFM0   A0A1B0D2C8   A0A1B0CVQ1   A0A0L7QVG5   Q16LU6   A0A182G6R9   A0A1L8DGV8   A0A087ZWB7   A0A182PKV2   A0A2M4BYQ4   A0A1I8NA85   A0A2M4BYS3   A0A026WRK6   A0A1I8NRD6   A0A310SS33   A0A182F4D3   W5J696   A0A0N0U4R3   A0A154PUD2   F4X4W2   A0A195ET69   E9IGW2   A0A151IQL1   A0A158NVW3   A0A182TYY1   A0A182WZD9   A0A182L669   Q7Q1S4   A0A182ICS8   A0A182NAX8   T1GFC6   A0A182Q6F0   A0A182VD91   A0A2A3EMP5   A0A0K8TMY6   A0A182Y8B3   A0A336L1Y9   A0A182M7K7   A0A151WL25   U4UBW2   A0A182VTW6   A0A0K8VJ50   A0A034WKC8   A0A2J7RS70   E2AX80   W8C7R2   A0A182JNR6   A0A0K8UY36   K7IWJ2   D6WZM9   A0A0C9QAC1   A0A1A9WEA3   A0A1B6IJ38   A0A1B6MC32   A0A1B6G4R2   D3TR93   A0A1A9Y1I4   A0A1A9VYS8   A0A067QXQ0   A0A2P8XK76   N6SZK2   T1JBJ9   A0A182RGQ3   A0A0P4VV85   A0A0N7ZAT7   E0VVP5   D3TR94   A0A1B6D9X6   A0A224XXN6   A0A1Y1LRD1   Q29JX5   B4GKZ9   B3MKS2   A0A1W4UBD1   B4Q5A1   A0A2M3ZD09   A0A1B0FB53   Q9VM63   B4HY04   B4NZY7   B4N073   A0A0M4E7C1   R4G419   B4KJW0   B4JEF1   B4LRN6   A0A1W4XLN3   A0A1S3JLX6   A0A0L7LCJ9  

Pubmed

19121390    26354079    22118469    17510324    26483478    25315136    + More
24508170    30249741    20920257    23761445    21719571    21282665    21347285    20966253    12364791    14747013    17210077    26369729    25244985    23537049    25348373    20798317    24495485    20075255    18362917    19820115    20353571    24845553    29403074    20566863    28004739    15632085    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    26227816   

EMBL

BABH01008405    ODYU01000461    SOQ35298.1    NWSH01004561    NWSH01003746    PCG64928.1    + More
PCG65860.1    GDQN01009402    GDQN01008468    GDQN01007158    GDQN01003427    GDQN01003116    JAT81652.1    JAT82586.1    JAT83896.1    JAT87627.1    JAT87938.1    KQ459984    KPJ19087.1    KX778609    AON96578.1    KQ458793    KPJ05008.1    RSAL01000037    RVE51237.1    AGBW02008897    OWR52245.1    GFDL01014491    JAV20554.1    DS231816    EDS37568.1    AJVK01010584    AJWK01030992    KQ414727    KOC62481.1    CH477890    EAT35303.1    JXUM01045473    KQ561440    KXJ78581.1    GFDF01008395    JAV05689.1    GGFJ01009022    MBW58163.1    GGFJ01009021    MBW58162.1    KK107119    QOIP01000009    EZA58670.1    RLU18868.1    KQ759851    OAD62557.1    ADMH02002138    ETN58334.1    KQ435821    KOX72421.1    KQ435127    KZC14810.1    GL888679    EGI58535.1    KQ981993    KYN31107.1    GL763054    EFZ20235.1    KQ976772    KYN08454.1    ADTU01027553    AAAB01008980    EAA13884.4    APCN01005756    CAQQ02144572    AXCN02000652    KZ288215    PBC32542.1    GDAI01001889    JAI15714.1    UFQS01000289    UFQS01001336    UFQT01000289    UFQT01001336    SSX02482.1    SSX10393.1    SSX22856.1    AXCM01001829    KQ982974    KYQ48582.1    KB632191    ERL89813.1    GDHF01013431    JAI38883.1    GAKP01004759    JAC54193.1    NEVH01000277    PNF43684.1    GL443520    EFN61963.1    GAMC01003464    JAC03092.1    GDHF01020861    JAI31453.1    KQ971372    EFA10451.1    GBYB01011382    GBYB01011383    JAG81149.1    JAG81150.1    GECU01020775    JAS86931.1    GEBQ01006543    JAT33434.1    GECZ01012398    JAS57371.1    EZ423945    ADD20221.1    KK853235    KDR09543.1    PYGN01001870    PSN32407.1    APGK01050704    KB741175    ENN73214.1    JH432011    GDRN01094117    JAI59759.1    GDRN01094116    JAI59760.1    DS235813    EEB17451.1    EZ423946    ADD20222.1    GEDC01014913    JAS22385.1    GFTR01003645    JAW12781.1    GEZM01048958    JAV76244.1    CH379062    EAL32836.2    CH479184    EDW37315.1    CH902620    EDV31603.1    CM000361    CM002910    EDX04034.1    KMY88658.1    GGFM01005589    MBW26340.1    CCAG010007618    AE014134    AY061214    AAF52462.2    AAL28762.1    CH480818    EDW51934.1    CM000157    EDW87814.1    CH963920    EDW78008.2    CP012523    ALC38640.1    ACPB03021036    ACPB03021037    GAHY01001176    JAA76334.1    CH933807    EDW12563.1    CH916368    EDW03671.1    CH940649    EDW64638.1    JTDY01001772    KOB72926.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000283053    UP000007151    + More
UP000002320    UP000075880    UP000092462    UP000092461    UP000053825    UP000008820    UP000069940    UP000249989    UP000005203    UP000075885    UP000095301    UP000053097    UP000279307    UP000095300    UP000069272    UP000000673    UP000053105    UP000076502    UP000007755    UP000078541    UP000078542    UP000005205    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000075884    UP000015102    UP000075886    UP000075903    UP000242457    UP000076408    UP000075883    UP000075809    UP000030742    UP000075920    UP000235965    UP000000311    UP000075881    UP000002358    UP000007266    UP000091820    UP000092443    UP000078200    UP000027135    UP000245037    UP000019118    UP000075900    UP000009046    UP000001819    UP000008744    UP000007801    UP000192221    UP000000304    UP000092444    UP000000803    UP000001292    UP000002282    UP000007798    UP000092553    UP000015103    UP000009192    UP000001070    UP000008792    UP000192223    UP000085678    UP000037510   

PRIDE

H9JB02    Q9VM63   

Pfam

PF03366   YEATS        + More
PF00153   Mito_carr

Interpro

IPR005033   YEATS        + More
IPR038704   YEAST_sf       
IPR023395   Mt_carrier_dom_sf       
IPR018108   Mitochondrial_sb/sol_carrier       

SUPFAM

SSF103506   SSF103506       

Gene 3D

2.60.40.1970     1.50.40.10    

ProteinModelPortal

H9JB02   A0A2H1V376   A0A2A4J341   A0A1E1WAA2   A0A194RNK2   A0A1C9EGF5   + More
A0A194QHI5   A0A3S2NX48   A0A212FEQ9   A0A1Q3EZ26   B0VZZ6   A0A182JFM0   A0A1B0D2C8   A0A1B0CVQ1   A0A0L7QVG5   Q16LU6   A0A182G6R9   A0A1L8DGV8   A0A087ZWB7   A0A182PKV2   A0A2M4BYQ4   A0A1I8NA85   A0A2M4BYS3   A0A026WRK6   A0A1I8NRD6   A0A310SS33   A0A182F4D3   W5J696   A0A0N0U4R3   A0A154PUD2   F4X4W2   A0A195ET69   E9IGW2   A0A151IQL1   A0A158NVW3   A0A182TYY1   A0A182WZD9   A0A182L669   Q7Q1S4   A0A182ICS8   A0A182NAX8   T1GFC6   A0A182Q6F0   A0A182VD91   A0A2A3EMP5   A0A0K8TMY6   A0A182Y8B3   A0A336L1Y9   A0A182M7K7   A0A151WL25   U4UBW2   A0A182VTW6   A0A0K8VJ50   A0A034WKC8   A0A2J7RS70   E2AX80   W8C7R2   A0A182JNR6   A0A0K8UY36   K7IWJ2   D6WZM9   A0A0C9QAC1   A0A1A9WEA3   A0A1B6IJ38   A0A1B6MC32   A0A1B6G4R2   D3TR93   A0A1A9Y1I4   A0A1A9VYS8   A0A067QXQ0   A0A2P8XK76   N6SZK2   T1JBJ9   A0A182RGQ3   A0A0P4VV85   A0A0N7ZAT7   E0VVP5   D3TR94   A0A1B6D9X6   A0A224XXN6   A0A1Y1LRD1   Q29JX5   B4GKZ9   B3MKS2   A0A1W4UBD1   B4Q5A1   A0A2M3ZD09   A0A1B0FB53   Q9VM63   B4HY04   B4NZY7   B4N073   A0A0M4E7C1   R4G419   B4KJW0   B4JEF1   B4LRN6   A0A1W4XLN3   A0A1S3JLX6   A0A0L7LCJ9  

PDB

5VNB     E-value=2.95272e-53,     Score=524

KEGG

101740019    K11341 YEATS domain-containing protein 4 | (RefSeq) YEATS domain-containing protein 4

GO

GO:0035267   GO:0000812   GO:0006355   GO:0005634   GO:0003743   GO:0022857   GO:0016021   GO:0043486   GO:0070868   GO:0016246   GO:0097355   GO:0004402   GO:0016573   GO:0000123   GO:0005669   GO:0006367   GO:0005576   GO:0006030   GO:0008061   GO:0006631   GO:0050660   GO:0016627   GO:0008152   GO:0016491   GO:0003824  

Subcellular location

Nucleus  

Length:

230

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.09689

Exp number, first 60 AAs:

0.09689

Total prob of N-in:

0.02602

outside

1  -  230

 

 

Pi

254.674887

Theta

198.647807

Tajima's D

0.867343

CLR

0

CSRT

0.622268886555672

Interpretation

Uncertain