SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05440  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006693
Annotation
PREDICTED:_hemocytin_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 3.34
 

Sequence

CDS
ATGCGTCGAATCTTTTTCTCTTTTATTTTAATTTACTGCACATTTAACTGCGAAGCTGGGTATGGAATTCCGGCTTCAAGTGACACATATGGACAATCAGACGTTCAGGCCCCTCCATATGTACCGGCTTATCTGAAAAACCAGAACTTCGCGAAAACTGGCTACCCAGGCGTGAAAACTCACTACGGCGGCACGAAGACAGTATACGGTGGTACAAAAACTGGGTACGGAGGAACCAAAACTGGTTATGGAGGGACTGGTTACGGTGGACTTAACGCCGGCTACGGAGGACCCCACGGCGGATATGGAGGATCCAATATGGGTTATGGCCAAAGTAGTGGTGGCCATGGGTTTTCCTGGGTCACCCCATCTCAGTATTCCGAAACCAGGTCTTGGCATTCTCATTTCGGAGAAGCGCCTAATTACCAACAGTTCGTCGATAATGCAATGCAAGGTTTGCAACCGAAATGCGACCCAGAATGCAGGAACACAGGCATATGCGTTGACACAAACACGTGCCTTTGCCCAGCTAACTATCAAGGGAAGTACTGTGAGTTCGAGAAGAAACCTTGTCTATCATACCCGCCTCTGCCAATGAATGCTCGTAGGAAATGTTCGAGCGAACTGTGCACGATCACCTGCATGGAAGGTTACAAGTTCATCGACGGCACAACCGTGGCCAACATGCAGTGCACTGAGGGCGAGTGGCAGCCGACCCGGGCCGACTTCACCACGATCCCGGACTGCGAGCCCCAGTGCGAGCCCCCCTGTGTGAACGGCGGGATCTGTTTGTCTCTCAATATGTGCCAATGCTCAGCCGAATACAGGGGACCGCAGTGTCAATATTCAACCAGCGTTTGCGACATAAGGAAGCTGGCTTTCAACGGTGGTTACAAGTGCTTCGGAGACGGAGAAAAGTTCAGCTGCAAGCTCAAATGTCCCAGGGGCTCCAAGTTCAGTGCGACACCGGCTCCCGTCTACACTTGTCACTACGACAGCGGAGTGTTCCTCCCGCAACCGATACCACAGTGTGAATTCCAGGACGTCGTGGTCATAAGTCCGAATCATCACAACAATTCGTCGTACTATTCGTACTCGCAAGGCTCGAGTGAGTCTCACTCAAGGGAACGAGGTGATACGCCGTCTCACTCGAGTGAGGCTCACGGCTATGGCCACACTGGTGGACCCCACGGCTCCTATGGCATCAAGGAAAACCCTTTGGTGGTCATACAGGATTTCACGCCCAAAGGAGGCACTTGCTTGAGTTGGGCTGGTGTGCATTATAAGACCTTTGATGGGAAAATTTACAGCGTGCAATCACCATGCCAACACGTTCTGATCCGAGATGCTAAAGAACATAAATACACGGTGGCGGTTAGACAAGGAGAGTGCAAACGTTACCCGTACTGTCCAAGTGAAATCACCATTTACTTAGAGGACAAACCATTTTTCTTGTCTGTTGACGAGGACGGGTCGGTGTCATTCCGCAACAGTCGTCGGTTGATCCCGATGCCGGCCTCCCTGCCCGGCCTCAGGGTGGCCATGCCCAGCGACTACGTGCAAGTCAACCTGGACAATGCTGGGGTCACTCTCAAATGGGACACCAACAATTTAATATTGGTAGAAGCCTCTGTATTACTGTGGAACAACACCGAGGGTTTATGTGGGAAGCTTGATGGTAACCCAGAGAACGACTTTACAACCAAAGCAAACACGTTGGCCAAAACGAAATCTGAATTCGCTTCTTCGTGGAAACTCAACAAGATTGGAGATACATGCGAGGGTAATCCTACAGAGTCAAGCGCTTGTGAATCCAAGGGAGACGAGGACTTGAAGAAAGCAATGCAATTCTGTACAAGAATCTTCAGTAAAGATAAATTTAGGAAATGTTCAAAGGTAATGGATGTGTCATTATTGCTGGAAGCTTGCCAATGGGATTACTGTGCTTGTACAAAATCTCTAAGTCCAGAGGAATGTGCCTGCAGTACAGTCGCGGTGTATGCCAAGGAGTGTCTCCGTCACGGTGTGGAGGAGATGAAGAACTGGCGCGATCCTGACACCTGTCCAATGAAATGCCCGGAAGGCAAGATATACAAGGCGTGCGGCCCAGATGTGCAGGCAAGCTGTGCCTTCCCGAACGTGCCAGCCGTCAGCAGCGCGGACAACGTCACCTGCGTCGAGGGCTGCTTCTGTCCCGAGGGTCTCCTACTGGAGGCGGGACGATGTGTCCAGCCAGCCGATTGTCCCTGCAGACTCAGGAACAAGAGCTTCAAACCAGGAAGCGTTCTGCCCAAAGAATGTAATACGTGGTGA
Protein
MRRIFFSFILIYCTFNCEAGYGIPASSDTYGQSDVQAPPYVPAYLKNQNFAKTGYPGVKTHYGGTKTVYGGTKTGYGGTKTGYGGTGYGGLNAGYGGPHGGYGGSNMGYGQSSGGHGFSWVTPSQYSETRSWHSHFGEAPNYQQFVDNAMQGLQPKCDPECRNTGICVDTNTCLCPANYQGKYCEFEKKPCLSYPPLPMNARRKCSSELCTITCMEGYKFIDGTTVANMQCTEGEWQPTRADFTTIPDCEPQCEPPCVNGGICLSLNMCQCSAEYRGPQCQYSTSVCDIRKLAFNGGYKCFGDGEKFSCKLKCPRGSKFSATPAPVYTCHYDSGVFLPQPIPQCEFQDVVVISPNHHNNSSYYSYSQGSSESHSRERGDTPSHSSEAHGYGHTGGPHGSYGIKENPLVVIQDFTPKGGTCLSWAGVHYKTFDGKIYSVQSPCQHVLIRDAKEHKYTVAVRQGECKRYPYCPSEITIYLEDKPFFLSVDEDGSVSFRNSRRLIPMPASLPGLRVAMPSDYVQVNLDNAGVTLKWDTNNLILVEASVLLWNNTEGLCGKLDGNPENDFTTKANTLAKTKSEFASSWKLNKIGDTCEGNPTESSACESKGDEDLKKAMQFCTRIFSKDKFRKCSKVMDVSLLLEACQWDYCACTKSLSPEECACSTVAVYAKECLRHGVEEMKNWRDPDTCPMKCPEGKIYKACGPDVQASCAFPNVPAVSSADNVTCVEGCFCPEGLLLEAGRCVQPADCPCRLRNKSFKPGSVLPKECNTW

Summary

EMBL
BABH01008399    BABH01008400    BABH01008401    KQ459984    KPJ19090.1    ODYU01003880    + More
SOQ43191.1    KQ458793    KPJ05004.1    NWSH01001906    PCG69726.1    AGBW02008897    OWR52242.1    KX778609    AON96581.1    KB631679    ERL85336.1    LBMM01000160    KMR04693.1    GL443213    EFN62410.1    KQ981993    KYN30795.1    ADTU01013061    ADTU01013062    KQ981153    KYN08979.1    KQ982548    KYQ55284.1    LJIG01022538    KRT80046.1    GL887888    EGI69611.1    KQ976424    KYM88484.1    GL447952    EFN85665.1    KQ971372    EFA10333.2    GBYB01006924    JAG76691.1    KQ978251    KYM95931.1    KQ435760    KOX75564.1    KQ434868    KZC09215.1    KK107503    EZA49607.1    KQ414756    KOC61639.1    QOIP01000006    RLU21347.1    KZ288266    PBC30167.1    AJWK01025249    AJWK01025250    NNAY01000006    OXU32124.1    KK852470    KDR23192.1    NEVH01006738    PNF36643.1    GECZ01007479    JAS62290.1    GEBQ01007062    JAT32915.1    GEBQ01006096    JAT33881.1    GL732524    EFX89582.1    GEDC01009994    JAS27304.1    CVRI01000037    CRK93315.1    GDIQ01220223    JAK31502.1    GDIQ01079322    JAN15415.1    GDIQ01163196    JAK88529.1    GDIQ01065336    JAN29401.1    GDIQ01065335    JAN29402.1    GDIQ01066683    JAN28054.1    GDIQ01022807    JAN71930.1    GDIQ01115913    JAL35813.1    GDIQ01129908    JAL21818.1    GDIQ01115911    JAL35815.1    GDIQ01154097    JAK97628.1    GDIQ01115912    JAL35814.1    GDIQ01028898    JAN65839.1    GDIQ01045444    JAN49293.1    GDIQ01057989    JAN36748.1    GDIQ01228773    JAK22952.1    GDIQ01115910    JAL35816.1    GDIQ01113661    JAL38065.1    GDIQ01057988    JAN36749.1    GDIQ01113660    JAL38066.1    GDIQ01228774    GDIQ01213728    GDIQ01047291    GDIQ01031545    JAK37997.1    GDIQ01034292    JAN60445.1    GDIQ01129909    JAL21817.1    GDIQ01140155    JAL11571.1    GDIQ01221573    JAK30152.1    GDIQ01159145    JAK92580.1    GDIQ01159146    JAK92579.1    GDIQ01213727    JAK37998.1    GDIQ01055336    JAN39401.1    GDIQ01211428    JAK40297.1    GDIP01078177    JAM25538.1    GDIQ01148501    JAL03225.1    GDIP01069224    JAM34491.1    GDIP01063575    JAM40140.1    GDIP01195659    JAJ27743.1    GDIP01190558    JAJ32844.1    GDIP01228756    JAI94645.1    GDIP01050428    JAM53287.1    GDIP01043878    JAM59837.1    GDIP01165508    JAJ57894.1    LRGB01003123    KZS04410.1    GDIP01194408    JAJ28994.1    GDIP01166409    JAJ56993.1    GDIP01194409    JAJ28993.1    GDIP01123469    JAL80245.1    GDIP01215358    JAJ08044.1    GDIP01108717    JAL94997.1    GDIP01031192    JAM72523.1    GDIP01210257    JAJ13145.1    GDIP01123468    JAL80246.1    GDIP01197712    JAJ25690.1    GDIP01051678    JAM52037.1    GDIP01219556    JAJ03846.1    GDIP01123467    JAL80247.1    GDIP01215357    JAJ08045.1    GDIP01197711    JAJ25691.1    GDIQ01202779    JAK48946.1    GDIP01221606    JAJ01796.1    GDIQ01224322    JAK27403.1    KK856868    PTY26506.1    GEDC01004519    JAS32779.1   
Pfam
PF08742   C8        + More
PF00094   VWD
PF01826   TIL
PF00754   F5_F8_type_C
PF12456   hSac2
PF13330   Mucin2_WxxW
PF01607   CBM_14
PF00093   VWC
Interpro
IPR014853   Unchr_dom_Cys-rich        + More
IPR036084   Ser_inhib-like_sf       
IPR002919   TIL_dom       
IPR001846   VWF_type-D       
IPR000742   EGF-like_dom       
IPR001007   VWF_dom       
IPR013032   EGF-like_CS       
IPR008979   Galactose-bd-like_sf       
IPR002557   Chitin-bd_dom       
IPR006207   Cys_knot_C       
IPR000421   FA58C       
IPR036508   Chitin-bd_dom_sf       
IPR002172   LDrepeatLR_classA_rpt       
IPR000571   Znf_CCCH       
IPR036201   Pacifastin_dom_sf       
IPR034753   hSac2       
IPR022158   Inositol_phosphatase       
IPR036055   LDL_receptor-like_sf       
IPR025155   WxxW_domain       
SUPFAM
SSF57567   SSF57567        + More
SSF57625   SSF57625       
SSF49785   SSF49785       
SSF57283   SSF57283       
SSF57424   SSF57424       
Gene 3D
PDB
6N29     E-value=2.31803e-23,     Score=272

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.997822
 
 
Length:
770
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.55447
Exp number, first 60 AAs:
0.55018
Total prob of N-in:
0.02697
outside
1  -  770
 
 

Population Genetic Test Statistics

Pi
222.454067
Theta
179.604078
Tajima's D
0.732672
CLR
0.206351
CSRT
0.585670716464177
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 ERFDAEMR 100.00 9e-15
26280517 IEMEMSQVWR 96.00 9e-10
29197581 GPQCQYSTSVCDIR 96.00 9e-10
26280517 EWAQSVCGAIK 100.00 9e-09
24402669 FIDEISGR 100.00 9e-09
28467696 FIDGIYVSEK 100.00 9e-09
29197581 EFCADIDNKEPEHPCVANVENK 100.00 9e-09
24402669 IGDPSGINSCFVGCFMK 100.00 2e-05
26822097 GAWVCSEAACGAR 100.00 0.003
26280517 GDIIFFIFNR 100.00 0.003
24402669 GPIDNTHPVK 100.00 0.003
28467696 GPPVFFYFSGSK 100.00 0.003
29197581 GICGTFNINQKDDFITPENDVEQSAIAFANK 100.00 0.003
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