SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05438
Pre Gene Modal
BGIBMGA011141
Annotation
PREDICTED:_uncharacterized_protein_LOC101735378_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.017
 

Sequence

CDS
ATGGAGATGCGATGGTACCGGTCTAGTCGGACCTCATTGCTGACCTATTGGATATTTTTGTTGCAAATGTTGGAAAGCGCGCGTCGCGGAGCCGAAGGTCACGGACGACTGATGGACCCGCCCGCCAGAAACTCGATGTGGAGGTTCGGCTTCCCCAACCCCGTCAACTACAACGACAACGAGCTTTTCTGTGGAGGTTATGCTGTGCAATGGGAGCAAAACGAGGGAAAGTGCGGAGTGTGCGGTGACGCGGCTCATCTCACTGAGCCCCGTCCCCACGAGGCCGGAGGAATGTACGGAAAGGGAATCGTGACCAGGCATTATAGCGTTGGCCAGGAAATCGAGGTTGAAGTCGAGTTGACAGCTAATCACTTGGGAACGTTCGTGATGAAGCTGTGTCCAAACAACAACCCGAAACAAGAAGCGACTCAGGAGTGCTTCGACAGATATCCCCTTTACGTTTCGGAAACCAGAGAAGACAGGTTCCTGATACCTTTGGACACGGCGAAGAAAGAGGTATTCAGGTACAGAGTGCGGCTGCCGCCTTATGTAACCTGCACGCAATGTGTTCTACAGTGGACTTATTATACTGGCAACATGTGGGGGATCTGCCCCAACGGCACGGAGGCGGTCGGCTGCGGCAGGTCGGAGACGTTCCGCAACTGTGCTGACGTCAGCGTTATCACCAGCACGGGCGGCCTGCCCCCCGCCTTCGCCGGCGACCTGCGCAGGGACTACCCCTTCCTGCTCTACTACCGGGACCTCAACATGCCCAAGTCCATCTACCCGCTTGTTGTAAGAGACCAAGTTTGCGTTCCGTCTTACGGGTTCCGCAACCTGCCCGGCATGCTGAGCTGGTGCCAGACCAACTGTCTCCGGTACCCTCCCAACTGCCCCGAAGCTCTCTGCTCTTGCCCTCAAGTTTGCGAGGCCGTAGGCGAGTACGAAGGGCGCGAAGGTGCCGACGTGTACTGCATGGACCTGTGTATCGTTTACCCGCCCAAGTGTCCGACGGACAAGTGCCGCTGCTACTAA
Protein
MEMRWYRSSRTSLLTYWIFLLQMLESARRGAEGHGRLMDPPARNSMWRFGFPNPVNYNDNELFCGGYAVQWEQNEGKCGVCGDAAHLTEPRPHEAGGMYGKGIVTRHYSVGQEIEVEVELTANHLGTFVMKLCPNNNPKQEATQECFDRYPLYVSETREDRFLIPLDTAKKEVFRYRVRLPPYVTCTQCVLQWTYYTGNMWGICPNGTEAVGCGRSETFRNCADVSVITSTGGLPPAFAGDLRRDYPFLLYYRDLNMPKSIYPLVVRDQVCVPSYGFRNLPGMLSWCQTNCLRYPPNCPEALCSCPQVCEAVGEYEGREGADVYCMDLCIVYPPKCPTDKCRCY

Summary

EMBL
BABH01035137    BABH01035138    NWSH01001403    PCG71363.1    KQ458793    KPJ05002.1    + More
RSAL01000166    RVE45273.1    KX778609    AON96584.1    KQ459984    KPJ19092.1    AGBW02012692    OWR44604.1    ODYU01009702    SOQ54317.1    NNAY01000262    OXU29650.1    AAZX01003319    GBBI01002536    JAC16176.1    KK852704    KDR18045.1    LJIG01022679    KRT79288.1    AXCN02002230    ATLV01017855    KE525195    KFB42570.1    CH933810    EDW06677.2    AAAB01008846    EAA06469.4    APCN01001258    CH902622    KPU75157.1    AE014298    ADV37629.1    AHN59351.1    GAMC01004746    GAMC01004744    JAC01812.1    GAKP01006032    GAKP01006031    GAKP01006030    JAC52922.1    BT082123    ACQ57830.1    GDHF01024389    GDHF01007737    JAI27925.1    JAI44577.1    AXCM01003235    KZ288409    PBC26108.1    GBXI01015884    GBXI01004544    GBXI01004011    JAC98407.1    JAD09748.1    JAD10281.1    GBXI01012509    JAD01783.1    KQ973114    EFA12117.2    KQ435763    KOX75381.1    CH963738    EDW72154.2    KQ435163    KZC14930.1    CH954180    KQS29736.1    GBYB01004188    GBYB01004189    GBYB01004190    JAG73955.1    JAG73956.1    JAG73957.1    CH940653    EDW62501.2    AJWK01026851    AJWK01026852    AJWK01026853    JRES01000755    KNC28636.1    CH379063    KRT06039.1    NEVH01024944    PNF16656.1    OUUW01000016    SPP88838.1    AK404976    BAM20414.1    DS235000    EEB10190.1    CVRI01000020    CRK90972.1    SPP88836.1    ADMH02000093    ETN67840.1    JTDY01001122    KOB74812.1    APGK01043495    KB741014    KB632293    ENN75490.1    ERL91622.1    UFQT01000155    SSX20984.1    GL453916    EFN75226.1    GGMS01009864    MBY79067.1    GGMR01003028    MBY15647.1    ABLF02033674    KQ760688    OAD59354.1    GL438827    EFN68250.1    GL888103    EGI67374.1    KQ981490    KYN41368.1    ADTU01013720    ADTU01013721    KQ976736    KYM76040.1    KK107295    EZA52983.1    KQ978287    KYM95633.1    KQ983106    KYQ47402.1    LBMM01006396    KMQ90643.1    CH480819    EDW53099.1    CM000162    EDX01142.1    AY119122    AAM50982.1    AAF46012.2    CH916371    EDV91861.1    GAMC01004745    JAC01811.1    CP012528    ALC48354.1    KQ979479    KYN21338.1    JXJN01002576    AJVK01020107   
Pfam
PF03067   LPMO_10        + More
PF00400   WD40
Interpro
IPR004302   Cellulose/chitin-bd_N        + More
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       
SUPFAM
SSF50978   SSF50978       
Gene 3D
PDB
5MSZ     E-value=1.36517e-47,     Score=478

Ontologies

Topology

SignalP
Position:   1 - 33,         Likelihood:  0.825135
 
 
Length:
344
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.616949999999998
Exp number, first 60 AAs:
0.57544
Total prob of N-in:
0.13026
outside
1  -  344
 
 

Population Genetic Test Statistics

Pi
189.992208
Theta
153.976222
Tajima's D
0.822952
CLR
0.77307
CSRT
0.608419579021049
Interpretation
Uncertain
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