SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05423
Pre Gene Modal
BGIBMGA006654
Annotation
PREDICTED:_protein_KIAA0100_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 2.465
 

Sequence

CDS
ATGAGCAGCCTGCGCACGTGGGGCACGCTGCTCGCCGCCGAGGAGCAGCCGCCGCCCCGGGCTGTCCGCACGGTGGTGGTGCGGCAGGGCGAGCCCTGGGGCGACGTGGAGCTGGAGCGCAGCATGATGCCGCTCAAGTGGTACTACGACCTGTGCTGCGAGATGGCGCAGTTCAGCTACGCCTTCGGGCCCTGCTGGGACCCCGTCATCGCTCACTGCAATCTCGCGTTCGACCACGTGTCCCGGCCGTCCCTGGACCCGTCCCCGCCCCTGGCCTGGTGGGACAAGGTGCGGCTGCTGATGCACGGGCGCCTCACTCTCAACTGCAGCAAGTTCACGTGCCTGCTGCACGTGTCGCTCGACCCCTACAACACCACCGAGGAGATGGAAGTCACGTGGACCGACCTCGTCTTGGACTGGACGAACGGCAAGTTGGGTTTCCTGGGCTCGCTGAGCGTGTTGGTGCGCACGGCCAGCAAGTACGACGACTGCCGCGTGCTGAGCGCCGGCCGCGTGCGCCTGGGCGTGCGCCTGGCCTGGGCGTGCGGCGCCGACCCGCGCCACCACCACGCCGTCACGCCCTGCGCGCCCACGCGCACGCCCGACTACTCCAGCAACCAGGAACACGACTCGTACCGCGCCTTCCGGTCGCAGGGCCTGGACCTGCACCTGACCCTGGAGACGAAGCCGGCCGACAGGGACGCGCCCGGACCCGTCCTGCTGCTGTACGGGAGCACGCTGCGATGGTTCGAGAGCCTGAAGCTGATCCTGTCGGGCATCACGCGGCCCACCCGCCGCGGCCGCCTGTTCAACAACGTGCGGCCCCGCAAGCCGCAGCTCTCCCGCCACTACCGGAACGTCAGCGTGTCCCTCACACTACATAATTTGCAAGTGTGCTACTGGTCGTCGTCGTCCCTGCAGCGCGGCATCGAGCTGTGCGGCGGGCGCGTGACGTGCGGCGCCAAGCACGCGCTGCGCCTGGAGCCCGCGCCCGGCCCGCTGCGCCGCCGCCCGCGCGCGCTGTGGGCCGCGCACTACCTCACCTGCGACCTCAACGACGCCGAGATCTGGCTCAAGACGCGCGCCGCCGACGACAAGATGAGTGTGGGCGGCGGCGGAGGCGACTCTCCGCAAGCGATGGAGAAGCTGTACTGTCTGAGCGTGCGGCGCGTCTCGTACACGCGCGAGGCGGGCGGGGGTGGGGGCGGGGGCGGGGGCGGGCCGGCGCACCGCGTGGCCGTGCACCACCTGCGCGGGGCCTGGACCAAGCTCAACCGGGACCTGGCCTTCGGGCTCATCGACACCTACATCAAGACGCAGCAACTGAAGAAGAATTTGTCAACAAAAGCTTTCAAGGAGGAAGAGCAGCCGGCGACCTCTCCGAAATTGCAAAGAGAAGCCGATGTCACGTCCCCGCCACCTACGACGTCACAAAGCGTGTCGAGCCAGTGCGGCGGCGGCATGCTGGCGGCGCTGGTGGCGGAGGCGGGCGGGGACGCGCCCGTCGTGTTCAGCGACGAGCTCAGCGGCGCCGACACCGCCGCGCCCGCCGCCGCCGCGCCGCACGGCCGCCTGCTGCTCGACGACGACAACTCGCACACCGCCTGCCTCGCAATTCCTCGCTGGCTCACTCTGTTCCCGTCCGCAGTGGAGCTGGTGAACTCGCAAGTGGTGCTGAAGGGGTGCGAGACGCGCGGCTACGTGATGGTGTGCGCGGCGCGGGCCGAGGTGCGGCAGCGGGTGAGCCGGCCGCCCGCGCCCGCCGCGCGCGCCTGGAGCGGCTCGCTGTCCGCCATGCAGTACTACGCCACGGTGAGCGCCGCCGACAACCACCGGCTGGACCACCACATCCAGTGGGTGGGGGTGGAGGAGATCGAGGAGCGCTGCCCGGAGATCAGCGCGCTGCCGGACGTGCCGCGGCTGGTGGGCAGCGGGCACTCTGCGGGCGGCGTCATCGGGCGCACCGTGGGGCCCAGCGCGGCCGCGGCGCAGCTGCAGCGCATCGTGTCGCGCTGCGCCTGCGAGTTCCACTACGTGTCGCTGGAGGACGCGCCGCACGCACCCGCCGCCGCGCCGCACCCCTACGACTCCTTCTCGCTCATGCACCACGACCTCGACGTCTGCACCAACTCGCTGCAGTACGCGATGCTGCTGGACGTGGTGAACAACGTGGTGCTCCACGTGGAGCCGGAGCGGCGCCGCACGCTGGAGCGCCGCGCCAGGATGCGGTTCCAGCTGCAGCTGCACCAGGACCAGGACCCGCGCCAGCAGATACACAAGCTGCAGACGCAGGTGAGAGAGTCTCTGGCCAGACTGCGTCGATTGGAGAAGGAGTACTATTTGAAGAACAGGTCCATAACGGGAAACGATCCTGTCGCTGTTGCGGAACTGAAGAGCTTGGACGATCAGGTGAACGAGTGCAAGGAGTGCGTGTGGTCGCTGGGCGAGGAGCTGGAGGCGATGGTGCGCGCGGCGCGGGAGCTGCGGCGCGAGGTGCCGGCGGGCGCGGCGCCGCACCGCTACAACGAGATCTGCTTCAAGAGCGCGCGCTGGCGGCTCACCGACGCCGACGGACAGCTGGGCATCGCCGACCTGCTGCTCACCAACTTCCTGTACACGAAGACGTCTCGTTCCGACGACTCAGTGGAGCACCAGCTGGAGGTTGGCTACGTCAGCGTCAAGAATCTGTTACCCAACGAACCCTTTCCAGAGGTGCTGGTGCCGCAGGAGCCCTCGGGCCGCGCCCCGCTGGCCCGGCGCGCCGCGCTGCGCGTGTTCTGCCGCGACCGCCCGCCCGTGGGAGGCATCGCCGTCAAGGAGCACTTCGAGGTCAACATCGTGCCCATACGGATCGGCCTTACAAAGAAGTTCTTCAATACGATGCTGAAGTTCTGTTTCCCTGAGCGGGACCCGGACTCCATAGACGAGGCGGAGGACGAGGAGGGCGCGCCCAGGCCCTCCACCGGGCTCGTCTCCACGGGCTCCAAGAAACTCAAGAAGAAGGCGAAGGACTCCAACTCCAACTTCTACGTCAAACGGGACAATAAAGATAAAGATGACGTCGAGAAGATGAAGGAGCGTGCAGAGAAGAACAAGCTGTTCATCTACATCAAGATCCCGGAGGTGCCCGTCCGCGTGTCGTACAAGGGCAGCAAGGAGAAGAACCTGGAGGACGTGCGCGACCTGCCGCTGGTGCTGCCCACGCTCGAGTACCACAACGTTACCTGGACCTGGCTCGACCTGCTGCTCGCCACCAAGAACGACACCAGGAGGGTGATCCTGTCGCAGGCCATCCGGCAGAAGCTGCAGCTGCACCGGCGCGCGGCCGCCGCGCCCGAGCCGCTGGAGGAGGACAAGGCGCGCCTGCTGCTGGGCGAGCGCACGGTCGCCGAGAACAAACCCCAGAAGAAGAGCACACCGAGCGTCTTCAAGTTTTCCAAATCGTAA
Protein
MSSLRTWGTLLAAEEQPPPRAVRTVVVRQGEPWGDVELERSMMPLKWYYDLCCEMAQFSYAFGPCWDPVIAHCNLAFDHVSRPSLDPSPPLAWWDKVRLLMHGRLTLNCSKFTCLLHVSLDPYNTTEEMEVTWTDLVLDWTNGKLGFLGSLSVLVRTASKYDDCRVLSAGRVRLGVRLAWACGADPRHHHAVTPCAPTRTPDYSSNQEHDSYRAFRSQGLDLHLTLETKPADRDAPGPVLLLYGSTLRWFESLKLILSGITRPTRRGRLFNNVRPRKPQLSRHYRNVSVSLTLHNLQVCYWSSSSLQRGIELCGGRVTCGAKHALRLEPAPGPLRRRPRALWAAHYLTCDLNDAEIWLKTRAADDKMSVGGGGGDSPQAMEKLYCLSVRRVSYTREAGGGGGGGGGGPAHRVAVHHLRGAWTKLNRDLAFGLIDTYIKTQQLKKNLSTKAFKEEEQPATSPKLQREADVTSPPPTTSQSVSSQCGGGMLAALVAEAGGDAPVVFSDELSGADTAAPAAAAPHGRLLLDDDNSHTACLAIPRWLTLFPSAVELVNSQVVLKGCETRGYVMVCAARAEVRQRVSRPPAPAARAWSGSLSAMQYYATVSAADNHRLDHHIQWVGVEEIEERCPEISALPDVPRLVGSGHSAGGVIGRTVGPSAAAAQLQRIVSRCACEFHYVSLEDAPHAPAAAPHPYDSFSLMHHDLDVCTNSLQYAMLLDVVNNVVLHVEPERRRTLERRARMRFQLQLHQDQDPRQQIHKLQTQVRESLARLRRLEKEYYLKNRSITGNDPVAVAELKSLDDQVNECKECVWSLGEELEAMVRAARELRREVPAGAAPHRYNEICFKSARWRLTDADGQLGIADLLLTNFLYTKTSRSDDSVEHQLEVGYVSVKNLLPNEPFPEVLVPQEPSGRAPLARRAALRVFCRDRPPVGGIAVKEHFEVNIVPIRIGLTKKFFNTMLKFCFPERDPDSIDEAEDEEGAPRPSTGLVSTGSKKLKKKAKDSNSNFYVKRDNKDKDDVEKMKERAEKNKLFIYIKIPEVPVRVSYKGSKEKNLEDVRDLPLVLPTLEYHNVTWTWLDLLLATKNDTRRVILSQAIRQKLQLHRRAAAAPEPLEEDKARLLLGERTVAENKPQKKSTPSVFKFSKS

Summary

EMBL
KX778609    AON96595.1    KQ458793    KPJ04984.1    AGBW02008811    OWR52504.1    + More
KQ459984    KPJ19107.1    KZ288403    PBC26208.1    KQ414758    KOC61463.1    KK107078    EZA60508.1    QOIP01000011    RLU16427.1    LBMM01003812    KMQ93106.1    KQ978023    KYM98010.1    ADTU01023310    ADTU01023311    GL437958    EFN69785.1    KQ982803    KYQ50553.1    GL887898    EGI69565.1    GL448450    EFN84616.1    KK852473    KDR23115.1    NNAY01000576    OXU27590.1    NEVH01003007    PNF40865.1    KQ971362    EFA07873.1    GBBI01003265    JAC15447.1    KYB25782.1    LJIG01022721    KRT79061.1    GECL01002938    JAP03186.1    GFTR01008789    JAW07637.1    KQ435724    KOX78506.1    DS235132    EEB12374.1    KQ976723    KYM76690.1    KQ981948    KYN32655.1    KQ980322    KYN16568.1    GDHC01002453    JAQ16176.1    GBHO01025769    JAG17835.1    GGMS01010507    MBY79710.1    ABLF02041084    GBYB01011834    JAG81601.1    GFDL01002490    JAV32555.1    GDHF01022171    JAI30143.1    GBXI01011079    JAD03213.1    GAMC01017941    GAMC01017939    GAMC01017937    JAB88616.1    UFQS01000930    UFQT01000930    SSX07814.1    SSX28048.1    UFQS01000941    UFQT01000941    SSX07888.1    SSX28122.1    CH933809    EDW18665.2    JXJN01014762    GANO01000139    JAB59732.1    JRES01000234    KNC33123.1    CCAG010004390    JXUM01026475    JXUM01026476    KQ560757    KXJ81002.1    GEBQ01018456    JAT21521.1    CH940647    EDW69330.2    KA645320    AFP59949.1    APCN01004337    CH954178    EDV50747.2    KQS43483.1    AE014296    AAF47740.2    ALI30451.1    CM002912    KMY97303.1    CH902618    EDV39632.2    ATLV01019709    ATLV01019710    KE525278    KFB44556.1    CH964095    EDW79258.1    LNIX01000002    OXA60410.1    OUUW01000002    SPP76219.1    CP012525    ALC42922.1    AAAB01008960    EAA11765.3    GAKP01012594    JAC46358.1    LJIJ01000056    ODN04060.1    GL732526    EFX88195.1    LRGB01001663    KZS10916.1    GDIP01071879    JAM31836.1    GDIP01021606    JAM82109.1    GDIP01053230    JAM50485.1    GDIQ01025501    JAN69236.1    GDIP01177915    JAJ45487.1    GDIQ01132212    JAL19514.1    GECZ01024233    JAS45536.1    QCYY01001749    ROT75648.1    GDIQ01085681    JAN09056.1    KK112883    KFM58756.1    CH478054    EAT34174.1    PNF40866.1    CH480817    EDW50305.1    CM000363    EDX09048.1    CH916366    EDV96361.1    CVRI01000040    CRK94800.1    GFXV01003808    MBW15613.1    GGLE01003503    MBY07629.1    GACK01000980    JAA64054.1   
Pfam
PF10347   Fmp27_GFWDK        + More
PF10351   Apt1
PF10344   Fmp27
PF10293   DUF2405
Interpro
IPR019439   FMP27_N        + More
IPR019441   FMP27_GFWDK_dom       
IPR019443   FMP27_C       
IPR019409   FMP27_DUF2405       

Ontologies

Topology

Length:
1148
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0048
Exp number, first 60 AAs:
0.00049
Total prob of N-in:
0.00015
outside
1  -  1148
 
 

Population Genetic Test Statistics

Pi
177.423528
Theta
154.30673
Tajima's D
0.409162
CLR
1.016264
CSRT
0.485325733713314
Interpretation
Uncertain
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