Gene

KWMTBOMO05411

Pre Gene Modal

BGIBMGA006680

Annotation

PREDICTED:_probable_DNA_replication_complex_GINS_protein_PSF2_[Amyelois_transitella]

Location

Bomo_Chr10(+):1372571-1374738      View in EpiBrowser

Full name

DNA replication complex GINS protein PSF2       + More
Probable DNA replication complex GINS protein PSF2      

Alternative Name

GINS complex subunit 2

Location in the cell

Cytoplasmic   Reliability : 1.451 Mitochondrial   Reliability : 1.708

CDS

ATGGAACCTTATGAAATCGAGTTTATTGGTGAGAATCGGATAATCAGTATAACACCAAACTTTACCCATGATAAAATATACTTGATATGCGGTGAATTTGGTCCGTTTCGTGCTGGTTTACCTGTGAACGTACCACTCTGGCTGGCTATCATGCTAAAGCAGAAACAAAAGTGCCATGTTATCCCTCCTGACTGGATGGACGTGGAAGTTTTGGAGAATATTAAAGAAGAGGAAAAGCGTTCCAGATTCTTCACAAAGATGCCAAATGAACACTATATGGTGGAAGCCAAACTGATACTTGGTTCAGCTGCCGAAGATGTTCCCAATGCACCAGAAATAAAGACTATTATCAAAGACATCTGGGATATAAGAATGTCTAAGTTACGAACATCAATGGATGCATTGATGAAAACTGGAGGTGGCTATGGCAGATTAGATCATTTAACAATGATGGAAATAAACTCAGTGAAACCTCTTCTACCTGCTGCTATGGACAACCTCTTAAGGATGCAAATGAAAACGAAAAAGACAGCACCATCGCTCAATTTAAATAGTTCAACCTTCAGTCAATCAGGGAGCTCTCAAAATACATAG

Protein

MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMDVEVLENIKEEEKRSRFFTKMPNEHYMVEAKLILGSAAEDVPNAPEIKTIIKDIWDIRMSKLRTSMDALMKTGGGYGRLDHLTMMEINSVKPLLPAAMDNLLRMQMKTKKTAPSLNLNSSTFSQSGSSQNT

Description

The GINS complex plays an essential role in the initiation of DNA replication.

Subunit

Component of the GINS complex.
Component of the GINS complex which is a heterotetramer of Sld5, Psf1, Psf2 and Psf3.

Similarity

Belongs to the GINS2/PSF2 family.

Keywords

Complete proteome   DNA replication   Nucleus   Reference proteome  

Feature

chain  Probable DNA replication complex GINS protein PSF2

Uniprot

H9JAY5   A0A1E1WP58   A0A1C9EGI7   A0A0L7KWA7   A0A2H1V7P2   A0A0N1INJ5   + More
A0A194QNA9   A0A212EVH9   S4PLH1   A0A067QTG0   A0A2J7RRZ8   A0A2P8Y6T8   E9GHY1   A0A310SFE3   B0WD86   W8C889   A0A1B0A5Y2   A0A0N0BC54   A0A182GEW5   Q175H4   A0A0K8TKA9   D3TR45   A0A1A9V6W8   A0A1Q3EW89   A0A088A6B1   A0A2A3EAY0   A0A195DMV1   A0A1A9X614   A0A154PCQ7   A0A1A9WDL8   A0A1Y1M4S0   A0A195AWB3   A0A158P1W4   A0A3B0JC07   F4W642   A0A151I7X8   A0A0L7RJB2   E2AUX7   A0A162SE06   A0A195ERA8   A0A151WP32   A0A232FEH8   A0A0P6AGA1   A0A026WB65   E2B8N4   A0A1I8QEP2   A0A0K8W1V7   A0A182JKD0   A0A084VGK0   K7J3J2   A0A034WMY9   A0A1I8MQ31   A0A0A1X6Z9   A0A0L0CGI4   A0A182W8N7   T1G2N2   A0A182QKS7   J3JWM7   A0A182VCF8   A0A182X987   Q5TXV1   A0A182Y670   A0A182KZ66   A0A182HR63   A0A182TRK6   A0A2C9JNB1   A0A194ALK1   A0A182F350   A0A182LW41   A0A182RWN4   D6X0V8   B4MDS0   B5DIX7   B4GPW2   A0A1B6CNC0   B3N3R3   A0A1W4WAI5   B4JQE1   A0A182NNZ4   B4NYJ5   V3ZK44   W5JUU6   B3MU45   B4MZP3   B4QA63   B4I382   Q9VQY9   A0A2B4RX52   A0A1S4EMW1   A0A087SXK8   B5DIX8   A0A0J9QVI8   A0A2L2YP27   V5H5P6   B4KES6   A0A210PNE2   K1R5T3   A0A1S3HQ06   A0A0M5J8Z0   A0A182PXD8  

Pubmed

19121390    26227816    26354079    22118469    23622113    24845553    + More
29403074    21292972    24495485    26483478    17510324    26369729    20353571    28004739    21347285    21719571    20798317    28648823    24508170    30249741    24438588    20075255    25348373    25315136    25830018    26108605    23254933    22516182    23537049    9087549    12364791    14747013    17210077    25244985    20966253    15562597    18362917    19820115    17994087    15632085    17550304    20920257    23761445    10731132    12537572    12537569    22936249    26561354    25765539    18057021    28812685    22992520   

EMBL

BABH01008312    GDQN01002428    JAT88626.1    KX778609    AON96604.1    JTDY01005071    + More
KOB67400.1    ODYU01001085    SOQ36827.1    KQ461033    KPJ09973.1    KQ458793    KPJ04971.1    AGBW02012180    OWR45505.1    GAIX01004030    JAA88530.1    KK853292    KDR08843.1    NEVH01000596    PNF43610.1    PYGN01000858    PSN39966.1    GL732545    EFX80914.1    KQ766110    OAD53736.1    DS231895    EDS44358.1    GAMC01000057    JAC06499.1    KQ435922    KOX68504.1    JXUM01010543    KQ560311    KXJ83110.1    CH477400    EAT41746.1    GDAI01002841    JAI14762.1    EZ423897    ADD20173.1    GFDL01015577    JAV19468.1    KZ288300    PBC28887.1    KQ980724    KYN14151.1    KQ434874    KZC09709.1    GEZM01040674    JAV80772.1    KQ976731    KYM76325.1    ADTU01006902    OUUW01000004    SPP79894.1    GL887707    EGI70177.1    KQ978397    KYM94208.1    KQ414582    KOC70914.1    GL442912    EFN62760.1    LRGB01000044    KZS21211.1    KQ982021    KYN30414.1    KQ982892    KYQ49624.1    NNAY01000390    OXU28717.1    GDIP01031145    JAM72570.1    KK107293    QOIP01000005    EZA53178.1    RLU22629.1    GL446361    EFN87940.1    GDHF01007499    JAI44815.1    ATLV01012963    KE524828    KFB37094.1    GAKP01002016    JAC56936.1    GBXI01007410    JAD06882.1    JRES01000438    KNC31322.1    AMQM01003587    KB096222    ESO07225.1    AXCN02002100    APGK01042893    BT127645    KB741009    KB632250    AEE62607.1    ENN75598.1    ERL90592.1    AAAB01006447    EAL42206.2    APCN01001653    GELH01000956    GELH01000955    JAS03317.1    AXCM01000708    KQ971372    EFA10560.2    CH940661    EDW71331.1    CH379060    EDY70270.1    CH479187    EDW39634.1    GEDC01030061    GEDC01022342    JAS07237.1    JAS14956.1    CH954177    EDV57722.1    CH916372    EDV99121.1    CM000157    EDW87628.1    KB203854    ESO82760.1    ADMH02000392    ETN66725.1    CH902624    EDV33374.1    CH963920    EDW77828.1    CM000361    EDX03701.1    CH480820    EDW54227.1    AE014134    AY071234    LSMT01000298    PFX20908.1    KK112417    KFM57597.1    EDY70271.2    CM002910    KMY88053.1    IAAA01030192    IAAA01030193    LAA09200.1    GANP01006128    JAB78340.1    CH933807    EDW12976.1    KRG03526.1    NEDP02005575    OWF38030.1    JH816693    EKC29341.1    CP012523    ALC38744.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000007151    UP000027135    + More
UP000235965    UP000245037    UP000000305    UP000002320    UP000092445    UP000053105    UP000069940    UP000249989    UP000008820    UP000078200    UP000005203    UP000242457    UP000078492    UP000092443    UP000076502    UP000091820    UP000078540    UP000005205    UP000268350    UP000007755    UP000078542    UP000053825    UP000000311    UP000076858    UP000078541    UP000075809    UP000215335    UP000053097    UP000279307    UP000008237    UP000095300    UP000075880    UP000030765    UP000002358    UP000095301    UP000037069    UP000075920    UP000015101    UP000075886    UP000019118    UP000030742    UP000075903    UP000076407    UP000007062    UP000076408    UP000075882    UP000075840    UP000075902    UP000076420    UP000069272    UP000075883    UP000075900    UP000007266    UP000008792    UP000001819    UP000008744    UP000008711    UP000192221    UP000001070    UP000075884    UP000002282    UP000030746    UP000000673    UP000007801    UP000007798    UP000000304    UP000001292    UP000000803    UP000225706    UP000079169    UP000054359    UP000009192    UP000242188    UP000005408    UP000085678    UP000092553    UP000075885   

PRIDE

H9JAY5    Q9VQY9   

Pfam

PF05916   Sld5        + More
PF13621   Cupin_8
PF04884   DUF647

Interpro

IPR007257   GINS_Psf2        + More
IPR021151   GINS_A       
IPR036224   GINS_bundle-like_dom_sf       
IPR003347   JmjC_dom       
IPR041667   Cupin_8       
IPR006968   RUS_fam       

SUPFAM

SSF158573   SSF158573       

ProteinModelPortal

H9JAY5   A0A1E1WP58   A0A1C9EGI7   A0A0L7KWA7   A0A2H1V7P2   A0A0N1INJ5   + More
A0A194QNA9   A0A212EVH9   S4PLH1   A0A067QTG0   A0A2J7RRZ8   A0A2P8Y6T8   E9GHY1   A0A310SFE3   B0WD86   W8C889   A0A1B0A5Y2   A0A0N0BC54   A0A182GEW5   Q175H4   A0A0K8TKA9   D3TR45   A0A1A9V6W8   A0A1Q3EW89   A0A088A6B1   A0A2A3EAY0   A0A195DMV1   A0A1A9X614   A0A154PCQ7   A0A1A9WDL8   A0A1Y1M4S0   A0A195AWB3   A0A158P1W4   A0A3B0JC07   F4W642   A0A151I7X8   A0A0L7RJB2   E2AUX7   A0A162SE06   A0A195ERA8   A0A151WP32   A0A232FEH8   A0A0P6AGA1   A0A026WB65   E2B8N4   A0A1I8QEP2   A0A0K8W1V7   A0A182JKD0   A0A084VGK0   K7J3J2   A0A034WMY9   A0A1I8MQ31   A0A0A1X6Z9   A0A0L0CGI4   A0A182W8N7   T1G2N2   A0A182QKS7   J3JWM7   A0A182VCF8   A0A182X987   Q5TXV1   A0A182Y670   A0A182KZ66   A0A182HR63   A0A182TRK6   A0A2C9JNB1   A0A194ALK1   A0A182F350   A0A182LW41   A0A182RWN4   D6X0V8   B4MDS0   B5DIX7   B4GPW2   A0A1B6CNC0   B3N3R3   A0A1W4WAI5   B4JQE1   A0A182NNZ4   B4NYJ5   V3ZK44   W5JUU6   B3MU45   B4MZP3   B4QA63   B4I382   Q9VQY9   A0A2B4RX52   A0A1S4EMW1   A0A087SXK8   B5DIX8   A0A0J9QVI8   A0A2L2YP27   V5H5P6   B4KES6   A0A210PNE2   K1R5T3   A0A1S3HQ06   A0A0M5J8Z0   A0A182PXD8  

PDB

2Q9Q     E-value=3.28311e-46,     Score=462

KEGG

101737596    K10733 GINS complex subunit 2 | (RefSeq) probable DNA replication complex GINS protein PSF2

GO

GO:0005634   GO:0006260   GO:0000811   GO:0031298   GO:0032508   GO:0000727   GO:0030261   GO:1900087   GO:0043138   GO:0006271   GO:0032784   GO:0008270   GO:0006508   GO:0006810   GO:0004889   GO:0005216   GO:0045211   GO:0016491   GO:0003824  

PANTHER

PTHR12772   PTHR12770  

Subcellular location

Nucleus  

Length:

197

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.25263

Exp number, first 60 AAs:

0.2501

Total prob of N-in:

0.02032

outside

1  -  197

 

 

Pi

78.148799

Theta

142.008304

Tajima's D

-1.462922

CLR

550.970036

CSRT

0.0675466226688666

Interpretation

Uncertain