SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05408
Pre Gene Modal
BGIBMGA006662
Annotation
cuticular_protein_glycine-rich_14_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.106
 

Sequence

CDS
ATGGCCAAGTTGATAGTCGCCCTCGCTTTGATCGGCTGCGTGGCCGCCGAGCCTCCGGTCGGGTACAGCTACTCCGCTCCTTCGTCCATCGTCATCGGAGGACACTCTTCCCTCAGCAGCGGGGGACACTACACCCCGGTGCCTGTCGGACACCAGGAAACCGAGGGCTACAGTGTAGACCCCCATCTGCTCGAGAAGATCAAGACCATCATCCTTAAGGACGAGATCCAGAACCAGGCCTACCAATCCGTCTCTTCTTCCCATGGTCACGGACACGGCGTCTCTTCCCACTACGGGCCCCCCGCTCCTGTCTACGGCGTACCCCACGACAGAATCGTCGGCATCGAACTGGAGCATCTCCAGCAAGCTATCCAGGTCGCCCAGTATCACCAGGCTGAAGAAGGCTACGCTGGTGGCTATGCCGGTGGTTACTCTGGCTACTCTGGCATCTCTGGTTACTCCAGCGGCGGTCATGGTGGTTACTCCAGCGGCGGTCACTCCTACTCCGCTCCCTCCATCAGCTACAGCACCATCGGAGTCCCGTCAGGATCGTACGGAGTCCCTTCCCCATCATCGTCCTACGGCGCTCCCCATCATTAA
Protein
MAKLIVALALIGCVAAEPPVGYSYSAPSSIVIGGHSSLSSGGHYTPVPVGHQETEGYSVDPHLLEKIKTIILKDEIQNQAYQSVSSSHGHGHGVSSHYGPPAPVYGVPHDRIVGIELEHLQQAIQVAQYHQAEEGYAGGYAGGYSGYSGISGYSSGGHGGYSSGGHSYSAPSISYSTIGVPSGSYGVPSPSSSYGAPHH

Summary

Interpro
IPR040123   NLP28/29/30/31       

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.995069
 
 
Length:
199
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.71343
Exp number, first 60 AAs:
0.69779
Total prob of N-in:
0.05062
outside
1  -  199
 
 

Population Genetic Test Statistics

Pi
135.959178
Theta
165.275115
Tajima's D
-0.587907
CLR
433.798098
CSRT
0.221038948052597
Interpretation
Uncertain
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