SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05398
Pre Gene Modal
BGIBMGA006675
Annotation
neuropeptide_receptor_A1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.982
 

Sequence

CDS
ATGGAGATAGAAGAAATTGAGCTGTACAGACAAATGAACTACAGCTACGACTTTAACGGGACCTTCAACGGGACCATGGGCACTTGTCCCATCGTCAATCTTCCGTACGTATCCATCGTGACGCAGGTACTGTACGCCCTGGTCTGCATTGTAGGCCTGCTCGGAAACACCCTCGTCATATACGTTGTCCTGCGCTACTCCAAGATGCAGACCGTCACCAACATGTACATAGTAAACTTGGCCATCGCGGACGAGTGCTTCCTCATCGGGATACCGTTCCTTATTACGACCATGTCCCTTAATAAGTGGCCCTTTGGAGATTACATGTGCAAGACTTACATGATTTCGACCGGGATCAATCAGTTTACCAGTAGTATATTCCTGTGTATAATGAGTGCTGATAGATACATTGCTGTATGTCATCCAATTGCGGCCCCTCGGCTTAGAACACCGTGCGTGTCACGAATCGTATCGGCAGCCGCCTGGACAGCGTCCGCAGCAATCATGACGCCTATATTCATGTACGCGAAATTGGTTCGGATTGGAAACAAACTATCTTGCAATATCGTATGGCCAGAACAAGACTTCAGCCAAGGCCAGATTACATTCACGTTGTATTCGTTCGCTCTCGGTTTTGCTGCGCCCCTGACTCTTATATTCATTTTCTACTGCCTCGTCATTCGGAAATTGAAGACAGTTGGCCCAAAGAACAAATCGAAGGAAAAGAAGCGTTCTCATAGGAAAGTGACGAAGTTGGTATTAACTGTGATTGCTGTATACGTCTTGTGCTGGCTACCGTACTGGGCCTTCCAGATGGCACTTATCTACTCCCCTCCATCGCAATGTGTGAACCACATAACGATCACTGTTTTTCTTGTCGCCGCCTGCTTCAGCTACAGCAATTCCGCAATGAATCCGATCCTCTACGCGTTTCTGTCTGATAATTTCAAGAAGAGTTTTTTGAAAGCGTGCACTTGTGCCGCCGGAAAGGACGTGAACGCCACTCTGCACGTTGAGAACAGCGTTATCCCGCGAAGAAGGGCACGAGCGCAGGCCAGGGCGGCGGAGGCGAGGGGTGGATTTGCTGCGGCTGTCGGGGGCTCGCGATCTGAAGCGTCTACAGCGATGACGTCTCGCTCGATGGCCGCCAGCGAGGTGCTGCCACTGGAAGCGCGTCCCCCGACCTTGACCCCCCTGATAGCGCACAACGGCCTCTCGCACTCGCGACTCTGA
Protein
MEIEEIELYRQMNYSYDFNGTFNGTMGTCPIVNLPYVSIVTQVLYALVCIVGLLGNTLVIYVVLRYSKMQTVTNMYIVNLAIADECFLIGIPFLITTMSLNKWPFGDYMCKTYMISTGINQFTSSIFLCIMSADRYIAVCHPIAAPRLRTPCVSRIVSAAAWTASAAIMTPIFMYAKLVRIGNKLSCNIVWPEQDFSQGQITFTLYSFALGFAAPLTLIFIFYCLVIRKLKTVGPKNKSKEKKRSHRKVTKLVLTVIAVYVLCWLPYWAFQMALIYSPPSQCVNHITITVFLVAACFSYSNSAMNPILYAFLSDNFKKSFLKACTCAAGKDVNATLHVENSVIPRRRARAQARAAEARGGFAAAVGGSRSEASTAMTSRSMAASEVLPLEARPPTLTPLIAHNGLSHSRL

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01008248    AB330421    BAG68399.1    HQ634155    ADX66345.1    JTDY01001203    + More
KOB74554.1    AGBW02014841    OWR41004.1    KQ458793    KPJ04954.1    ODYU01008030    SOQ51294.1    KT030998    ALM88296.1    KZ150036    PZC74633.1    KQ461033    KPJ09958.1    NNAY01001607    OXU23442.1    GL438030    EFN69671.1    KQ435922    KOX68412.1    GL450717    EFN80627.1    LBMM01002573    KMQ94640.1    ABLF02034416    ABLF02034419    KQ414582    KOC70841.1    QOIP01000010    RLU17551.1    KK855540    PTY23041.1    GBHO01012474    GBRD01011189    GDHC01002624    JAG31130.1    JAG54635.1    JAQ16005.1    MG550190    AWT50624.1    GBBI01002592    JAC16120.1    ACPB03016366    GEDC01002232    JAS35066.1    ADTU01017566    ADTU01017567    KQ981703    KYN37431.1    NEVH01002981    PNF41291.1    GBXI01014413    JAC99878.1    GBXI01008130    JAD06162.1    JRES01000760    KNC28563.1    KQ980873    KYN12061.1    GAMC01016931    JAB89624.1    KK852657    KDR19252.1    GEBQ01006760    JAT33217.1    GECU01020159    JAS87547.1    PYGN01000448    PSN46174.1    UFQS01003415    UFQT01003415    SSX15618.1    SSX34979.1    KX255655    AOV81581.1    DS232089    EDS34469.1    JXJN01005432    ATLV01023898    KE525347    KFB49834.1    CCAG010021716    CCAG010021717    GL769162    EFZ10721.1    AXCM01009213    CP012525    ALC45024.1    AAAB01008986    EAA00677.2    MH810197    QBC65462.1    JXUM01014282    KQ560398    KXJ82627.1    CH477868    EAT35478.2    JXUM01065223    KQ562336    KXJ76119.1    APCN01003287    CH940647    EDW70712.2    AB817283    BAO01050.1    CH916381    CH916366    EDV94260.1    EDV97870.1    CH933809    EDW19095.2    CVRI01000037    CRK93701.1    ADMH02000348    ETN66881.1    CH477945    EAT34879.2    AY046072    AAL02125.1    BT030406    ABO52826.1    CH480834    EDW46509.1    CM002912    KMZ00401.1    AY029170    AAK31793.1    AE014296    AAN11677.2    AAZ66058.2    CH954178    EDV51866.2    GAPW01001297    JAC12301.1    JXUM01118533    KQ566197    KXJ70329.1    AGB94708.1    CM000159    EDW94613.2    ALI30485.1    MWRG01001895    PRD33456.1    CH902618    EDV41042.2    CH964095    EDW78923.2    DS232111    EDS35110.1    CVRI01000072    CRL07535.1    ATLV01010807    KE524615    KFB35697.1    KK113175    KFM59525.1    UFQS01001259    UFQT01001259    SSX10006.1    SSX29728.1    AXCN02001041    UFQS01000797    UFQT01000797    SSX06969.1    SSX27313.1   
Pfam
PF00001   7tm_1
Interpro
IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn       
IPR000586   Somatstn_rcpt       
IPR001418   Opioid_rcpt       
PDB
6B73     E-value=3.42097e-49,     Score=492

Ontologies

Topology

Length:
410
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
167.43152
Exp number, first 60 AAs:
30.63104
Total prob of N-in:
0.61842
POSSIBLE N-term signal
sequence
outside
1  -  41
TMhelix
42  -  64
inside
65  -  75
TMhelix
76  -  98
outside
99  -  112
TMhelix
113  -  132
inside
133  -  152
TMhelix
153  -  175
outside
176  -  204
TMhelix
205  -  227
inside
228  -  252
TMhelix
253  -  275
outside
276  -  289
TMhelix
290  -  312
inside
313  -  410
 
 

Population Genetic Test Statistics

Pi
210.110768
Theta
212.693905
Tajima's D
1.306684
CLR
0
CSRT
0.739063046847658
Interpretation
Uncertain
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