Gene
KWMTBOMO05394
Annotation
PREDICTED:_aquaporin-like_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane Reliability : 2.724
Sequence
CDS
ATGGGATCCGCACCGAGCGTCGCGCTGCAGTACCGCGGCGGGTGCGGCTGCACCGCGCGACTGCCGACCGACAATCGGCCGGAGCTGGCGCGCGTGGCCGCAGCCGAGGCGCTGGGCGCTGCTTTGCTCGTGCTGCTCTCGTGTTTTCCATCCTGTCTGCCCACGCCTCTCAGCTCCACGCACACTGCGCTCGCCAGCGGTTGTGTTGTCGCTATGCTGGTTCAGGGCTTGGATCACATCTCGGGCGCGATGATGAACCCGACGGTGACGCTGGCAGCCGTGGTGTGGGGTCGGGTGTCTGCGGTGCGCGCGATCGTGATGTTCGCGGCACAGCTGGCGGGCGGAGCAGCGGGCGCCGCGGCTCTGGCCGCGCTGGTACCGGCGGGCGGTTCGCTGGCGGGGTGCCTGACGGTGCCGGCGCCCGGTGTTTCGACGGCTCGAGCGGTGGCGGTGGAGGCGGTGTTGGGCGCGTGCCTGGCGCTCGTCAACTGTGCCGCGTGGGATCCGCGCAACCAACACCTGCGTGACTCATGGCCGCTCCGGATCGGCACGTCCGTGGCGGCCATGTCCCTTGTTGCGGGCACGCTGACGGGCGCCAGCATGAACCCGGCCCGCAGCCTCGCCCCCGCGGTCTTATTGGGGCAGTTCCATCACCACTGGGTGTACTGGGTGGGCCCGCTGAGCGGCGGCGCCGGCGCGGCCGCGCTGTACTGCGCGCTGTGGCGCCCGCCGCCCCCCCGCGCCGCCCCCGCCCCCGCCCTGCCGCGCCCTCTCTCCAAGCACTGCACTGCCGCGTGCTGCTCCCGGGAAGACTGGCGGGCGCCCGGGGGTGGCGGGTGA
Protein
MGSAPSVALQYRGGCGCTARLPTDNRPELARVAAAEALGAALLVLLSCFPSCLPTPLSSTHTALASGCVVAMLVQGLDHISGAMMNPTVTLAAVVWGRVSAVRAIVMFAAQLAGGAAGAAALAALVPAGGSLAGCLTVPAPGVSTARAVAVEAVLGACLALVNCAAWDPRNQHLRDSWPLRIGTSVAAMSLVAGTLTGASMNPARSLAPAVLLGQFHHHWVYWVGPLSGGAGAAALYCALWRPPPPRAAPAPALPRPLSKHCTAACCSREDWRAPGGGG
Summary
Similarity
Belongs to the MIP/aquaporin (TC 1.A.8) family.
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF00230 MIP
Interpro
SUPFAM
SSF81338
SSF81338
Gene 3D
ProteinModelPortal
PDB
2B6O
E-value=7.81681e-22,
Score=254
Ontologies
GO
PANTHER
Topology
Length:
279
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
117.81999
Exp number, first 60 AAs:
11.74418
Total prob of N-in:
0.48577
POSSIBLE N-term signal
sequence
inside
1 - 105
TMhelix
106 - 128
outside
129 - 142
TMhelix
143 - 165
inside
166 - 176
TMhelix
177 - 199
outside
200 - 218
TMhelix
219 - 241
inside
242 - 279
Population Genetic Test Statistics
Pi
202.152694
Theta
42.809585
Tajima's D
0.373082
CLR
1.446732
CSRT
0.480525973701315
Interpretation
Uncertain
