SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05391
Pre Gene Modal
BGIBMGA006672
Annotation
PREDICTED:_shootin-1-like_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.215
 

Sequence

CDS
ATGAGCGCGCCAAATGCTACATGTGGGTGGAGGAGTCGCGTCAGGGTTATTATGAAAGAAAACAAAGAAAATGTTGCGAAATCATTGAGAGTGCCGGGTGAAGAGAATCAACCTAGAACACAAGGACCACATGATGAAACTGATTATGAAGGAAAACAAATACAAAACCAAAATAAAATTGATGAAACTTTAAATGTTGGAAAATTTAATGAGGATGAGACTCTTGTTGAGACCAAACGACAGGCTCTACTTCTTCTGTCCACTTACGAGCAACAAAACCAAGAGCTGTCGACTCACGATGCAAACAAACATAGGGATTCCACAACTAATTCTCGTTCCTTGCTCTGTGACAACTCGATTGAAATAGAACCACATCTTTACATGGATTCATCAAATGGGACTATGGTGGAGAATGATAATGCATCACGACTCGAAGCAGCATCACCATTTAATACCAAGCTATGTCAGCAAGGCGGTGTACAGCTCTCGCGAGACTCTGAGCCGGGGAACGACGTCTCCCCGCTACACACAATAAGAAAGCGTTTCAAATCACAATCGGAATGGATGTCAGATGATGTACCAACGAGGACGTCGTGCGCTCGCAGCGGGCGGCGCCGCGTGCGTCGTCGCCGCAACGCCCGCGCCCCTCCCCTCCCCCCGCGCCCTCCCCTCCCCCCGCGCCCTCCCCGCCTCCCCCCGCGCCGCCCGTCCGCCGCGACGCCAGCCTCGCAAGGTTACCGCGAGTAG
Protein
MSAPNATCGWRSRVRVIMKENKENVAKSLRVPGEENQPRTQGPHDETDYEGKQIQNQNKIDETLNVGKFNEDETLVETKRQALLLLSTYEQQNQELSTHDANKHRDSTTNSRSLLCDNSIEIEPHLYMDSSNGTMVENDNASRLEAASPFNTKLCQQGGVQLSRDSEPGNDVSPLHTIRKRFKSQSEWMSDDVPTRTSCARSGRRRVRRRRNARAPPLPPRPPLPPRPPRLPPRRPSAATPASQGYRE

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
248
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.05933
outside
1  -  248
 
 

Population Genetic Test Statistics

Pi
217.197126
Theta
176.595754
Tajima's D
0.700439
CLR
0.044909
CSRT
0.574671266436678
Interpretation
Uncertain
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