Silkworm Genome Informatics Database

Gene

KWMTBOMO05387

Pre Gene Modal

BGIBMGA002374

Annotation

PREDICTED:_GA-binding_protein_subunit_beta-2_[Bombyx_mori]

Location

Bomo_Chr9(-):16584405-16595033 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.211

CDS

ATGGCCAAAGGTGCACCCTTTACTACTGACTGGCTAGGCACGTCCCCGCTGCACCTGGCGGCCAGCAACAACCACGTGGAGACGTGCGCGGTGCTGCTGCGCGCGGGCGTGTCGCGGGACTCGCGCACCAAGGTGGACCGCACGCCGCTGCACCTGGCCGCCTACGCGGGCCACGCCGACGTCATCGCGCTGCTGCTGCGCTACGGCGCCCAGGTCGACTGCAGGGACATGCTGCGCATGACGCCGCTGCACTGGGCGGTGCAGCGCGGGCACGGGGGCGCGGCGGCCGAGCTGGTGCGGGGCGGCGCGGACCCCACGGCGCTGTCCAAGTTCCACAAGTCGCCGCTGTCGCTGGCCGCCGCCGCCAGCCGCGCCGACAGCCGCGCCGACATCCTCGCGCTCATCGAGGACGCGCTCAAGCAGCGGGAGGCCGCGCACTCCGTGGACGCGCTCGTCACCGAACAAAGCATGTCAGTGGATCAAGACGCGCAGCCACAGATAAACTTCGACCCGGTCCAAAACATCCCGGGGCGCAGCGACAGCGGCAGAGGCGAGGAGCGCGCCCCGCAGGAACAGCCAATCAAGATCGAAATAGATAACAGGGATAACGTAGAGAACAGCACGGAGAACAGACGCAGTGTAGCTGCGGCCATACTGCGTGCGCACGGCATCGCGCCCCTCCCGCCAGACCGCGGCTCCACGCTGCTCACCGCGCTGCAGAGCGGGCGACCCTCGCCCCCCCCCCCCCCCCCCCCCCCCCCGCGCTGCAGAGCGGGCGGACCCTCGTACTGTCCGGTATGTACCGGCACTGACACCTCTCCCCCCCCTAGTGCCGCGGCTCTCACCGCGCTGCAGAGCGGGCGGACCCTCGTACTGTCCGATGCCGGTAAGCTAATGCTGAAAGAAAGCACGGAGCCCCAAAACCAACCCTTTGGAGGGTCAAAGCCAGCCAATAGTAGCTCAGGCGTGCTGCTGACTGCTACTCCTGTCAAGTCGCCGCCGGCCCCGGGAGTTAAGATCTTCACCTTCAACAAGATGGTCAACAACAAAATCCCTATCAAGAAAATTATTAATCCTCATGATATGCAGGTGAAGTTTGTCCAACTGCCCCCGAATGCAAAAATCATATCTCCATCAAAAGTCATTCCAGTGAAGAATAAACCGAAAGTATCTTCGGAGGCAGGTCGACCTGCTGTCAAGATCATCATGAACAAAAACAATTTCAAGAAACTCATCGCCAATGTCAAGAACAATAACAATACTGTGCAGAACAAAAGTGACGTCACTAATATTGCTGAAACTGGCAGTAGTGAACTGGAGACAGGCACCGGCGGCTCTGTGTGGCGACATGCGGCTGAGGGCGCTCGGCGAGCCGAACTAGCCGCCTGCAGCACCCAGCCGGCGGTACTGCGGGCCGCCTTGCACGCCGCCGCCACCTTGCTGCGAGACCTCACCGATACCCTTCGACACTGCGAACGACACCACACCTAG

Protein

MAKGAPFTTDWLGTSPLHLAASNNHVETCAVLLRAGVSRDSRTKVDRTPLHLAAYAGHADVIALLLRYGAQVDCRDMLRMTPLHWAVQRGHGGAAAELVRGGADPTALSKFHKSPLSLAAAASRADSRADILALIEDALKQREAAHSVDALVTEQSMSVDQDAQPQINFDPVQNIPGRSDSGRGEERAPQEQPIKIEIDNRDNVENSTENRRSVAAAILRAHGIAPLPPDRGSTLLTALQSGRPSPPPPPPPPPRCRAGGPSYCPVCTGTDTSPPPSAAALTALQSGRTLVLSDAGKLMLKESTEPQNQPFGGSKPANSSSGVLLTATPVKSPPAPGVKIFTFNKMVNNKIPIKKIINPHDMQVKFVQLPPNAKIISPSKVIPVKNKPKVSSEAGRPAVKIIMNKNNFKKLIANVKNNNNTVQNKSDVTNIAETGSSELETGTGGSVWRHAAEGARRAELAACSTQPAVLRAALHAAATLLRDLTDTLRHCERHHT

Uniprot

A0A2H1WCL8 A0A212EWB8 A0A0N1PHA3

Pubmed

22118469 26354079

EMBL

ODYU01007770 SOQ50825.1 AGBW02012018 OWR45792.1 KQ460036 KPJ18442.1 + More

Proteomes

UP000007151 UP000053240

Pfam

PF12796 Ank_2 + More
PF00023 Ank

Interpro

IPR020683   Ankyrin_rpt-contain_dom        + More
IPR036770   Ankyrin_rpt-contain_sf
IPR002110   Ankyrin_rpt

SUPFAM

SSF48403 SSF48403

Gene 3D

1.25.40.20

CDD

cd00204 ANK

ProteinModelPortal

A0A2H1WCL8 A0A212EWB8 A0A0N1PHA3

PDB

1AWC E-value=2.15503e-35, Score=374

KEGG

101743419 no KO assigned | (RefSeq) uncharacterized LOC101743419

GO

GO:0005515 GO:0008270 GO:0005488 GO:0003677 GO:0003676 GO:0006511 GO:0005525 GO:0016491 GO:0003824

Length:

496

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.979329999999998

Exp number, first 60 AAs:

0.52388

Total prob of N-in:

0.04387

outside

1 - 496

Pi

260.155689

Theta

32.304274

Tajima's D

0.573496

CLR

0.701179

CSRT

0.538923053847308

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics