Gene

KWMTBOMO05378

Pre Gene Modal

BGIBMGA002550

Annotation

PREDICTED:_sodium_channel_protein_Nach-like_[Bombyx_mori]

Location

Bomo_Chr9(+):15981884-15986758      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.063

CDS

ATGGATAGAGATATGTTCGCTTGGAACACCACCTTCCCTTGCGTGACGATTTGTCCTGATAATGTATTGGATGAGAAGAAGCTTGCTATTTATCTCAGATCCTTCAAAGAGGAGGACAAGTCCACACTAGAAGCCTTTATTAGAGGTCTATCAAATATATCCTATGAAAACTTTAATACGGTTCCAATTTATGACGGCATTCCTTCAGATAAGTACTTGGAGCTTATTCTTAATTTCACAACAACATTCAAACCTACCCTGACTATAGGTGTGACTGGTGTAACTTTGGGAATTGTGCCCACAATAACTGAGATGGGACTCTGTTATGCTGTGAACTCAAAAGTGGCTGTCTATAATTCGCCAGAATATAGGTCCGCTAATAGATGGGACATAATAAAGAAACCGAATGAAACTTTGTTTATACATCCCTTAGACGGTGAAGTATATGCTCAAGTTATGAACTTATCGACTGGGTACAAAGTCTACATCCATGGCCCGTCTGAAGTACCAGATGTAGCGACAAAGAACATGTACTCAGAGAAAGATTTTTATCTCAAACTGTATGTTACTGCTGTAGCTATATACACAACTTCAGATGCAGCGGAACTGAGCATCTCCCAACGTCGCTGTCGCTTCCCCGAAGAGAACAATCTTCTGCACAATTCGATATACTCCTACACCATGTGTCGGATGGAATGTAGAATTCGACTCTGCTTAAAATACTGCAGATGTATTCCGCATTTTTATAGGAAAATTGGGGACGAACGAATATGTGATGTAAAAGGACTACAATGCTTATCAAAGTACAAAGATGAACTCACCAAGCTAAGACAGAAAAACGGTATGAAGATAGACTGCGGTTGCTATCCATTGTGCGAAGACATTAATTATGTCCTCCAATCTAATGCTCTACAACCTTGGTTTTTGGGGACGAATTTCCAATGGGGCATGGTGACCTACCCTCGAATGCGATACAGACGTGATATTATCTTTGGCTTCACTGATGTATTGGGTGAGTTTTAG

Protein

MDRDMFAWNTTFPCVTICPDNVLDEKKLAIYLRSFKEEDKSTLEAFIRGLSNISYENFNTVPIYDGIPSDKYLELILNFTTTFKPTLTIGVTGVTLGIVPTITEMGLCYAVNSKVAVYNSPEYRSANRWDIIKKPNETLFIHPLDGEVYAQVMNLSTGYKVYIHGPSEVPDVATKNMYSEKDFYLKLYVTAVAIYTTSDAAELSISQRRCRFPEENNLLHNSIYSYTMCRMECRIRLCLKYCRCIPHFYRKIGDERICDVKGLQCLSKYKDELTKLRQKNGMKIDCGCYPLCEDINYVLQSNALQPWFLGTNFQWGMVTYPRMRYRRDIIFGFTDVLGEF

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

A0A2H1VM38   H9IZ65   A0A0N0PBY3   A0A2A4J8F9   A0A194QIT6   A0A1Y1KQV7   + More
A0A1Y1KRK2   A0A0L7L353   D7EHU3   A0A182FQW1   A0A182XFC9   A0A084VJJ0   A0A0D3QCB9   A0A0D3QD25   A0A0D3QCC7   A0A0D3QCA7   A0A0D3QD89   A0A0D3QCE3   A0A0D3QCK5   Q7QA18   A0A0D3QDA0   A0A1S4FKH7   J9JJZ4   A0A2S2P0H9   A0A1I8NEQ8   A0A1J1IX88   A0A336L920   B4MS37   A0A0M5J2D8   A0A1I8PIK6   A0A3B0JPX1   N6W4Z4   A0A0P9BZ20   A0A1W4ULV8   A0A0B4LG42   B4KNP8   A0A1W4UZ35   A0A0L0CM82   A0A0Q9W3Z0   Q9W2B5   A0A0Q5VZ50   A0A0R1DXX9   A0A182KZK8   A0A182V6Z7   A0A182PP97   A0A182NSF9   A0A182KGH6   A0A182MVG2   A0A182TML5   W5JDB4   A0A182QZH4   A0A182HYM1   A0A182W3E2   A0A182J0T8   A0A182S7A6   Q16XQ2   B0WKN1   A0A182GAP1   A0A0J9RJQ0   B4GHD2   U4UF01   A0A182RT57   B4J6C1   B4I7X8   A0A182WLE3   A0A182NJB3   A0A182R4L2   A0A182GAD4   A0A2S2Q4G6   A0A182M0L1   A0A182JQ12   A0A2S2NKM0   A0A084WEE5   A0A182YEH0   A7URR0   A0A1A9ZH73   A0A182PUD1   A0A2H1VY89   A0A182FHE6   A0A1B0ETT1   Q7PTD1   A0A182WWV0   A0A1B0B0M5   B4MUB0   A0A1I8PY62   A0A212EVC7   H9ISX4   A0A0L0BS23   J9K6J9   A0A3S2THN1   D6W9K7   B4KHR1   A0A182UKQ3  

Pubmed

19121390    26354079    28004739    26227816    18362917    19820115    + More
24438588    25552603    12364791    14747013    17210077    17510324    25315136    17994087    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26108605    17550304    20966253    20920257    23761445    26483478    22936249    23537049    25244985    22118469   

EMBL

ODYU01003291    SOQ41856.1    BABH01011213    BABH01011214    KQ460864    KPJ11815.1    + More
NWSH01002500    PCG68149.1    KQ458714    KPJ05427.1    GEZM01080733    JAV62065.1    GEZM01080732    JAV62066.1    JTDY01003262    KOB69850.1    KQ973114    EFA12114.2    ATLV01013601    KE524871    KFB38134.1    KP274432    AJC98538.1    KP274448    AJC98570.1    KP274435    KP274437    KP274440    KP274444    AJC98544.1    AJC98548.1    AJC98554.1    AJC98562.1    KP274431    KP274441    KP274442    KP274446    KP274449    AJC98536.1    AJC98556.1    AJC98558.1    AJC98566.1    AJC98572.1    KP274433    KP274438    KP274443    KP274445    AJC98540.1    AJC98550.1    AJC98560.1    AJC98564.1    KP274447    AJC98568.1    KP274434    KP274436    KP274439    AJC98542.1    AJC98546.1    AJC98552.1    AAAB01008898    EAA09093.4    KP274450    AJC98574.1    ABLF02037336    GGMR01010350    MBY22969.1    CVRI01000059    CRL03774.1    UFQS01002201    UFQT01002201    SSX13481.1    SSX32911.1    CH963850    EDW74926.2    CP012524    ALC40968.1    OUUW01000001    SPP75396.1    CM000071    ENO01847.2    CH902619    KPU76597.1    AE013599    AHN56495.1    CH933808    EDW10033.2    JRES01000195    KNC33395.1    CH940648    KRF79677.1    AAF46777.2    CH954179    KQS62314.1    CM000158    KRJ99686.1    AXCM01000209    ADMH02001863    ETN60804.1    AXCN02000236    APCN01005389    CH477534    EAT39390.1    DS231974    EDS29962.1    JXUM01009081    JXUM01009082    JXUM01009083    KQ560276    KXJ83352.1    CM002911    KMY95679.1    CH479183    EDW35902.1    KB632293    ERL91617.1    CH916367    EDW00894.1    CH480824    EDW56703.1    JXUM01008859    JXUM01008860    KQ560270    KXJ83420.1    GGMS01003440    MBY72643.1    AXCM01003059    GGMR01005121    MBY17740.1    ATLV01023206    KE525341    KFB48589.1    AAAB01008807    EDO64702.1    ODYU01005187    SOQ45799.1    CCAG010023722    EAA04078.5    JXJN01006781    CH963857    EDW76036.1    AGBW02012225    OWR45404.1    BABH01013035    JRES01001455    KNC22798.1    ABLF02031579    ABLF02031581    RSAL01000133    RVE46312.1    KQ971312    EEZ98137.2    CH933807    EDW13348.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000037510    UP000007266    + More
UP000069272    UP000076407    UP000030765    UP000007062    UP000007819    UP000095301    UP000183832    UP000007798    UP000092553    UP000095300    UP000268350    UP000001819    UP000007801    UP000192221    UP000000803    UP000009192    UP000037069    UP000008792    UP000008711    UP000002282    UP000075882    UP000075903    UP000075885    UP000075884    UP000075881    UP000075883    UP000075902    UP000000673    UP000075886    UP000075840    UP000075920    UP000075880    UP000075901    UP000008820    UP000002320    UP000069940    UP000249989    UP000008744    UP000030742    UP000075900    UP000001070    UP000001292    UP000076408    UP000092445    UP000092444    UP000092460    UP000007151    UP000283053   

PRIDE

H9IZ65    Q9W2B5    H9ISX4   

Pfam

PF00858   ASC        + More
PF00612   IQ
PF07686   V-set

Interpro

IPR001873   ENaC        + More
IPR000048   IQ_motif_EF-hand-BS       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR037448   Zig-8       
IPR013106   Ig_V-set       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2H1VM38   H9IZ65   A0A0N0PBY3   A0A2A4J8F9   A0A194QIT6   A0A1Y1KQV7   + More
A0A1Y1KRK2   A0A0L7L353   D7EHU3   A0A182FQW1   A0A182XFC9   A0A084VJJ0   A0A0D3QCB9   A0A0D3QD25   A0A0D3QCC7   A0A0D3QCA7   A0A0D3QD89   A0A0D3QCE3   A0A0D3QCK5   Q7QA18   A0A0D3QDA0   A0A1S4FKH7   J9JJZ4   A0A2S2P0H9   A0A1I8NEQ8   A0A1J1IX88   A0A336L920   B4MS37   A0A0M5J2D8   A0A1I8PIK6   A0A3B0JPX1   N6W4Z4   A0A0P9BZ20   A0A1W4ULV8   A0A0B4LG42   B4KNP8   A0A1W4UZ35   A0A0L0CM82   A0A0Q9W3Z0   Q9W2B5   A0A0Q5VZ50   A0A0R1DXX9   A0A182KZK8   A0A182V6Z7   A0A182PP97   A0A182NSF9   A0A182KGH6   A0A182MVG2   A0A182TML5   W5JDB4   A0A182QZH4   A0A182HYM1   A0A182W3E2   A0A182J0T8   A0A182S7A6   Q16XQ2   B0WKN1   A0A182GAP1   A0A0J9RJQ0   B4GHD2   U4UF01   A0A182RT57   B4J6C1   B4I7X8   A0A182WLE3   A0A182NJB3   A0A182R4L2   A0A182GAD4   A0A2S2Q4G6   A0A182M0L1   A0A182JQ12   A0A2S2NKM0   A0A084WEE5   A0A182YEH0   A7URR0   A0A1A9ZH73   A0A182PUD1   A0A2H1VY89   A0A182FHE6   A0A1B0ETT1   Q7PTD1   A0A182WWV0   A0A1B0B0M5   B4MUB0   A0A1I8PY62   A0A212EVC7   H9ISX4   A0A0L0BS23   J9K6J9   A0A3S2THN1   D6W9K7   B4KHR1   A0A182UKQ3  

KEGG

101738674    no KO assigned | (RefSeq) sodium channel protein Nach-like

GO

GO:0005272   GO:0016021   GO:0006814   GO:0032589   GO:0050808   GO:0016020   GO:0003779   GO:0008270   GO:0006511   GO:0005525   GO:0016491   GO:0003824  

PANTHER

PTHR11690   PTHR23279  

Length:

340

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.64052

Exp number, first 60 AAs:

0.02338

Total prob of N-in:

0.14155

outside

1  -  340

 

 

Pi

268.863959

Theta

178.179472

Tajima's D

1.1146

CLR

0.087355

CSRT

0.690365481725914

Interpretation

Uncertain