Gene

KWMTBOMO05376  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002548

Annotation

larvae_cuticle_protein_[Choristoneura_fumiferana]

Location

Bomo_Chr9(+):15843095-15844594      View in EpiBrowser

Full name

Flexible cuticle protein 12      

Location in the cell

Cytoplasmic   Reliability : 1.285 Extracellular   Reliability : 1.669

CDS

ATGAAATCGTTCTTCGTTGTCGCTCTCTTCGTCGCCGTAGCTGTCGCTGCCCCAGTCGGCCCTGATGCCGACGCTGTCGTCATCAGACAAGACAACGACAACATTGGTGTCGAAGGATACAACACCGGCTATGAAACCTCCAACGGAATCAAGGCTCAGGAAACCGGTCAACTGAAGAACATTGGCACTGAAAACGAAGCTCTTGAGGTCCGCGGAGAATTTGCGTACATCGGCCCTGACGGAGTTACTTACGCTGTGACCTACGTCGCTAACGAGGGTGGATTCCAGCCTTCGGCACCTCACATTCCCAAGGCTTAA

Protein

MKSFFVVALFVAVAVAAPVGPDADAVVIRQDNDNIGVEGYNTGYETSNGIKAQETGQLKNIGTENEALEVRGEFAYIGPDGVTYAVTYVANEGGFQPSAPHIPKA

Keywords

Cuticle   Signal  

Feature

chain  Flexible cuticle protein 12

Uniprot

O96052   Q5MGQ4   A0A2H1VZY6   A0A3S2NUQ1   P45589   A0A1B0FY22   + More
A0A0L7LB46   B9UCQ9   A0A2A4J8W9   A0A1J1IRW4   A0A1B0CLL0   A0A2A4J7M4   D6WMB0   Q95V42   A0A1L8E379   N6UAA0   S4S7F9   A0A1W4WJ47   A0A1B0ETD6   D6WMB1   B4ML00   B4IZT2   A0A336LZR1   I4DLT3   A0A0M3QW63   Q2LZE0   B4H6H1   A0A182Q8M6   A0A182JGI7   A0A0R1DW45   B4HUQ2   B4QJA3   Q2TAR4   B3NGE1   B4PJD4   B4KWP2   A0A182S584   W5J4P1   N6TE67   A0A084W0U0   A0A336LX25   A0A1W4UWU2   Q8I0P8   A0A182NII5   U4U3D1   N6UDE5   A0A182S8V5   U4U131   A0A182M6R3   A0A3B0KAH0   A0A1I8JTT7   A0A182UDB5   A0A182KPH8   Q7PIJ2   A0A1L8E3C3   A0A1B0GNX6   B4LHE8   A0A212EMY2   A0A182GLK7   A0A182VI11   A0A182HF07   A0A1B0EWW3   B4IZU2   A0A3B0KMT3   Q16IX3   T1DQI3   A0A336LX70   B4J087   A0A3B0JSN5   W5J9B1   A0A0N1IP12   A0A182FCP1   B2DBP2   B4LHG9   B3MA22   A0A212EMZ3   C0H6J6   A0A084W0T9   H9IZ64   A0A1S4FZ80   Q16IX7   W5J7T2   A0A023EEV7   A0A212EMW7   A0A1I8M153   A0A182QTL9   A0A182VIU8   B0XA32   Q173C8   Q16IX5   A0A182GLK4   A0A182NII4   A0A182HF05   A0A182GJ28   A0A1I8PE08   A0A0T6B6X8   A0A212FK23   A0A182GLK2   A0A194QJ59  

Pubmed

10327600    11267900    19121390    19280704    16023793    7535619    + More
26227816    18362917    19820115    14662304    23537049    17994087    22651552    15632085    17550304    22936249    20920257    23761445    24438588    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20966253    12364791    14747013    17210077    22118469    26483478    17510324    18057021    26354079    24945155    25315136   

EMBL

BABH01011196    AB012081    AB021883    BR000505    BAA36273.1    BAA81902.1    + More
FAA00506.1    AY829732    AAV91346.1    ODYU01005497    SOQ46410.1    RSAL01000175    RVE45046.1    U08026    AJVK01014120    JTDY01001889    KOB72624.1    EU526836    ACD74812.1    NWSH01002504    PCG68128.1    CVRI01000059    CRL02971.1    AJWK01017420    PCG68127.1    KQ971343    EFA04243.1    AF428097    AAL16187.1    GFDF01000891    JAV13193.1    APGK01032634    KB740848    KB631977    ENN78645.1    ERL87573.1    JF415079    AFC88812.1    AJWK01010377    EFA04244.1    CH963847    EDW72925.1    CH916366    EDV95667.1    UFQT01000259    SSX22511.1    AK402251    BAM18873.1    CP012525    ALC43212.1    ALC43599.1    CH379069    EAL29569.1    CH479214    EDW33399.1    AXCN02000482    CM000159    KRK01273.1    CH480817    EDW50673.1    CM000363    CM002912    EDX09412.1    KMY97872.1    BC110760    AAI10761.1    CH954178    EDV51107.1    EDW93602.1    CH933809    EDW17489.1    ADMH02002086    ETN59432.1    APGK01032633    ENN78644.1    ATLV01019159    KE525263    KFB43834.1    UFQS01000259    SSX02137.1    SSX22514.1    AE014296    BT001606    KX532120    AAN12088.1    AAN71361.1    ANY27930.1    ERL87572.1    APGK01032635    APGK01032636    APGK01032637    APGK01032638    APGK01032639    ENN78646.1    ERL87574.1    AXCM01013823    OUUW01000009    SPP85120.1    APCN01000091    AAAB01008960    EAA44127.1    GFDF01000863    JAV13221.1    AJVK01014117    CH940647    EDW68478.1    AGBW02013768    AGBW02008154    OWR42844.1    OWR54092.1    JXUM01072291    KQ562712    KXJ75280.1    JXUM01036292    KQ561090    KXJ79740.1    AJVK01014121    EDV95677.1    SPP85118.1    CH478046    EAT34223.1    GAMD01001140    JAB00451.1    SSX22515.1    EDV95688.1    EDV95689.1    SPP85124.1    ETN59435.1    KQ460864    KPJ11813.1    AB264727    BAG30801.1    EDW68499.1    CH902618    EDV41242.1    OWR42846.1    BR000506    FAA00507.1    KFB43833.1    BABH01011198    EAT34219.1    ETN59433.1    GAPW01006364    JAC07234.1    OWR42845.1    DS232561    EDS43458.1    CH477427    EAT41132.1    CH477278    EAT34221.1    EAT45091.1    JXUM01072285    KXJ75277.1    JXUM01036290    KXJ79738.1    JXUM01067281    KQ562442    KXJ75906.1    LJIG01009416    KRT83124.1    OWR54093.1    JXUM01036286    JXUM01072280    KXJ75275.1    KXJ79736.1    KQ458714    KPJ05429.1   

Proteomes

UP000005204    UP000283053    UP000092462    UP000037510    UP000218220    UP000183832    + More
UP000092461    UP000007266    UP000019118    UP000030742    UP000192223    UP000007798    UP000001070    UP000092553    UP000001819    UP000008744    UP000075886    UP000075880    UP000002282    UP000001292    UP000000304    UP000008711    UP000009192    UP000075900    UP000000673    UP000030765    UP000192221    UP000000803    UP000075884    UP000075901    UP000075883    UP000268350    UP000075840    UP000075902    UP000075882    UP000007062    UP000008792    UP000007151    UP000069940    UP000249989    UP000075903    UP000008820    UP000053240    UP000069272    UP000007801    UP000095301    UP000002320    UP000095300    UP000053268   

PRIDE

O96052    Q8I0P8   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

O96052   Q5MGQ4   A0A2H1VZY6   A0A3S2NUQ1   P45589   A0A1B0FY22   + More
A0A0L7LB46   B9UCQ9   A0A2A4J8W9   A0A1J1IRW4   A0A1B0CLL0   A0A2A4J7M4   D6WMB0   Q95V42   A0A1L8E379   N6UAA0   S4S7F9   A0A1W4WJ47   A0A1B0ETD6   D6WMB1   B4ML00   B4IZT2   A0A336LZR1   I4DLT3   A0A0M3QW63   Q2LZE0   B4H6H1   A0A182Q8M6   A0A182JGI7   A0A0R1DW45   B4HUQ2   B4QJA3   Q2TAR4   B3NGE1   B4PJD4   B4KWP2   A0A182S584   W5J4P1   N6TE67   A0A084W0U0   A0A336LX25   A0A1W4UWU2   Q8I0P8   A0A182NII5   U4U3D1   N6UDE5   A0A182S8V5   U4U131   A0A182M6R3   A0A3B0KAH0   A0A1I8JTT7   A0A182UDB5   A0A182KPH8   Q7PIJ2   A0A1L8E3C3   A0A1B0GNX6   B4LHE8   A0A212EMY2   A0A182GLK7   A0A182VI11   A0A182HF07   A0A1B0EWW3   B4IZU2   A0A3B0KMT3   Q16IX3   T1DQI3   A0A336LX70   B4J087   A0A3B0JSN5   W5J9B1   A0A0N1IP12   A0A182FCP1   B2DBP2   B4LHG9   B3MA22   A0A212EMZ3   C0H6J6   A0A084W0T9   H9IZ64   A0A1S4FZ80   Q16IX7   W5J7T2   A0A023EEV7   A0A212EMW7   A0A1I8M153   A0A182QTL9   A0A182VIU8   B0XA32   Q173C8   Q16IX5   A0A182GLK4   A0A182NII4   A0A182HF05   A0A182GJ28   A0A1I8PE08   A0A0T6B6X8   A0A212FK23   A0A182GLK2   A0A194QJ59  

KEGG

692371    no KO assigned | (RefSeq) CPR4, BmorCPR4, LCP18; cuticular protein RR-1 motif 4

GO

GO:0042302   GO:0040003   GO:0031012   GO:0008010   GO:0016021   GO:0008897   GO:0007018   GO:0016020   GO:0003779   GO:0008270   GO:0006511   GO:0005525   GO:0016491   GO:0003824  

SignalP

Position:   1 - 16,         Likelihood:  0.998881

 

 

Length:

105

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.14087

Exp number, first 60 AAs:

6.12744

Total prob of N-in:

0.17781

outside

1  -  105

 

 

Pi

163.976043

Theta

159.47182

Tajima's D

-0.300013

CLR

226.567158

CSRT

0.293035348232588

Interpretation

Uncertain