Gene

KWMTBOMO05374  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002547

Annotation

PREDICTED:_neurexin-4_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr9(+):15752965-15764019      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.155 Extracellular   Reliability : 1.273 PlasmaMembrane   Reliability : 1.141

CDS

ATGTCTACGTCTCTGTCTGTGGGCAGTCTTCTGGATGACAATATTTGGCACGACGTAGTCATATCTAGGAACAGAAGGGACATCATCTTCTCTGTGGACCGGGTTATAGTGCAGGAGAGAATCAAGGGAGAATTCTCCAGGCTCAACTTGAACAGAGCTCTGTACATAGGGGGCGTGCCGAATTTACAAGAGGGTCTAGTTGTGAACCAAAATTTCACAGGCTGCATAGAGAACATGTACCTCAACGCGACCAACGTTATACAGGATTTGAAAAAGGGCTATGAGAGTGGCGAACCATTTAAGTTCCAGAAACTGAACACCCTGTACGCGTGTCCGGAGCCCCCTGTGGTGCCGGTGACGTTCCTGAAGGAAGGCTCGTACGCCAAGCTGCGCGGGTACTCCGGCGGCAGCGCGCTCAACGTGTCGCTGGAGTTCAGGACCTACGAGCTGCAGGGGCTGCTCGTGTACCACCGGTTCAACACCGAGGGATATGTTAAGGTATATCTTGAAGATGGTAAAGTGAAAGTCGAGTTGGAGACGGCCGGATCTCCTCGCGTGAAGCTGGACAATTACGTGGAGCTGTGGAACGACGGTCGCTGGCACTCGCTGATGCTGACCCTGGCCCCCGACTCGCTGGTGCTGTCCATGGACTCCAGAGCCGTGCACACGTCAAAGAGACTGCGATTTCTTACCGGCAGCTATTATTTTATAGCTGGAGGCAAAGCCCCACCGCGCGGCTTCATCGGTTGCATGCGCAAGATTTCCGTGGACGGGAACTACCGCCTGCCGACGGACTGGAAGAAGGAGGACTACTGCTGCCCCAACGAGCTCGTGTTCGACGCCTGCCAGATGATCGACAGGTGCAGCCCCAACCCCTGCGAGCACGGCGGCCGCTGCGCGCAGACCGCCGACGAGTTCTCCTGCAACTGTCGCGACACGGGCTACGCCGGCGCCGTGTGCCACACGTCGGTGCACCCGCTGTCGTGCCAGGCGTACCACAGCGTGTCGGCGGCCCGGCGCTCCGCCAGCGTGCACATCGACGTGGACGGCTCCGGCCCGCTGCCGCCCTTCCCCGTCACCTGCGAGTTCTACTCGGACGGCCGCGTGATAACGTCGGTGAAGCACTCGGTGTCGCAGAGCACGGTGGTGGACGGCTACCAGGAGGCGGGCAGCTTCCGGCAGGACGTCATCTACGACGCCAACCGGGCGCAGCTCGAGGCCCTGCTCAACAGATCTGTGTCCTGCTCGCAGCGACTGGACTACTGGTGCAGGCACTCGAGGCTCATGAACTCACCTAGCGAGGAGTCCAACTTCCAGCCGTTCGCGTGGTGGGTGTCCCGCTCCGGCCAGCGCATGGACTACTGGGCCGGCGCCACGCCCGGCTCGCGCATGTGCGCCTGCGGCCTGCTGGGCTCCTGTCTCGACAACACCAAGTGGTGCAACTGCGACGCAGAGTACGCGCAGCTGCGCCCCGAGGAGTTCCAGTCGGACGGCGGCGACATCACGGAGAAGGAGTTCCTGCCGGTGAAGCAGCTGCGCTTCGGCGACACTGGCAGCCACCTCGACGAGAAGGAGGGCCGCTACACGCTCGGGCCGCTGCTGTGCGAGGGGGACGATTTGTTCAACAACGCCATCACGTTCCGCGTGGCCGACGCCATCATCCTGCTGCCGACGTTCGACTTGGGGCACAGTGGCGACATCTACTTCGAGTTCAAGACGACCAAGGAGAATGCTGTTCTGCTGCATTCCAAGGGCCCGCAAGACTACATAAAGCTGTCAATAATCGGAGGGGATCAACTGCAGCTGCAGCTGCAAGTGGGTGACACGCCTCTAGGGGTATCCGTGGAGACCAGCAACCGTCTGGCTGACAACCAGTGGCACTCCGTGTCCATCGAAAGGAATAGGAAGGAGGCTAGGCTGGTGGTCGACGGAGCCTTGAAGAACGAGATCCGCACCGTGGGCGGCACGGCGCGCGCCCTGCAGCTGTCCACAGGCCTCGCCCTGGGCGCCGCGCTGGACCGCAGCGACGGGCTGGTGGGCTGCCTGCGCGCCCTGCTGCTCAACGGCAGGCCCGTGCACCTGGCGCCGCTCGCCCGCACCGGGCTGTACGGCATATCCGAGGGCTGCGTCGGCAAGTGCTCGTCGTCGCCGTGTCTCAACAACGGCACGTGCATCGAGGGCTTCGACTCCTACACGTGCGACTGTCGCTGGACGGCCTTCAAAGGCCCCATCTGTGCGGACGAAATCGGCGTAAATCTCCGACCGAACTCGTTGATCAAGTACGATTTCCTGGGCTCGTGGCGCTCCACCATCGCTGAGAAGATCCGGGTCGGCTTCACCACCACCAACCCGAAGGGATTCCTGCTCGGCTTCTACTCGAACATTTCAGGAGAGTACTTGACTCTGATGGTCTCCAATTCCGGTCACCTGCGCGTCGTGTTCGACTTCGGCTTCGAGCGGCAGGAGATCGTGTTCCAGGGGAAGCACTTCGCGCTGGGCCAGTACCACGACGTGCGGCTAGCGCGGCGGGACAGCGGCGCCACGCTCGCGCTGCAGGTGGACAGCTACGAGACGCAGGAGTACCGCTTCAACATCAAGGAGTCGGCGGACGCGCAGTTCAACAACATCCAGTACATGTACATCGGCCGCAACGAGTCCATGGGCGAGGGCTTCGTGGGCTGCGTGAGCCGCGTGGAGTTCGACGACATCTACCCGCTCAAGCTGCTCTTCCAGCAGGACCCGCCGCCCAACGTCAGGAGCCTCGGAGGAGGAGTTTTGCATGAGGACTTCTGCGGCGTGGAGCCCGTGACGCACCCGCCCGAGCCCGTGGAGACCCGGCCGCCGCCCGCCCTCGACCTGCAGCACGAGATCAACTTCCGGAAGACGGACGAAGCCATACTCGGAACGGTGCTGGGGTTCATCTTCCTGCTGCTGGTGGTGGTGGCGGTGGTGCTGGTGCGCGCGCTGTCGCGGCACAAGGGCGAGTACCTGACGCAGGAGGAGCGCGGCGCGGACGGGGCGGCCGACCCCGACGCCGCCGCGCTGGCCGCCGCCACCGGACCGCGCGTCACCAAGCGCAGGGAGTTCTTCATCTAA

Protein

MSTSLSVGSLLDDNIWHDVVISRNRRDIIFSVDRVIVQERIKGEFSRLNLNRALYIGGVPNLQEGLVVNQNFTGCIENMYLNATNVIQDLKKGYESGEPFKFQKLNTLYACPEPPVVPVTFLKEGSYAKLRGYSGGSALNVSLEFRTYELQGLLVYHRFNTEGYVKVYLEDGKVKVELETAGSPRVKLDNYVELWNDGRWHSLMLTLAPDSLVLSMDSRAVHTSKRLRFLTGSYYFIAGGKAPPRGFIGCMRKISVDGNYRLPTDWKKEDYCCPNELVFDACQMIDRCSPNPCEHGGRCAQTADEFSCNCRDTGYAGAVCHTSVHPLSCQAYHSVSAARRSASVHIDVDGSGPLPPFPVTCEFYSDGRVITSVKHSVSQSTVVDGYQEAGSFRQDVIYDANRAQLEALLNRSVSCSQRLDYWCRHSRLMNSPSEESNFQPFAWWVSRSGQRMDYWAGATPGSRMCACGLLGSCLDNTKWCNCDAEYAQLRPEEFQSDGGDITEKEFLPVKQLRFGDTGSHLDEKEGRYTLGPLLCEGDDLFNNAITFRVADAIILLPTFDLGHSGDIYFEFKTTKENAVLLHSKGPQDYIKLSIIGGDQLQLQLQVGDTPLGVSVETSNRLADNQWHSVSIERNRKEARLVVDGALKNEIRTVGGTARALQLSTGLALGAALDRSDGLVGCLRALLLNGRPVHLAPLARTGLYGISEGCVGKCSSSPCLNNGTCIEGFDSYTCDCRWTAFKGPICADEIGVNLRPNSLIKYDFLGSWRSTIAEKIRVGFTTTNPKGFLLGFYSNISGEYLTLMVSNSGHLRVVFDFGFERQEIVFQGKHFALGQYHDVRLARRDSGATLALQVDSYETQEYRFNIKESADAQFNNIQYMYIGRNESMGEGFVGCVSRVEFDDIYPLKLLFQQDPPPNVRSLGGGVLHEDFCGVEPVTHPPEPVETRPPPALDLQHEINFRKTDEAILGTVLGFIFLLLVVVAVVLVRALSRHKGEYLTQEERGADGAADPDAAALAAATGPRVTKRREFFI

Uniprot

H9IZ62   A0A2H1WVR4   A0A2A4J9Q9   A0A2A4J838   A0A212FIV0   A0A194QKI5   + More
A0A310S6B2   A0A2J7PDX5   A0A3L8DKW2   A0A026WLY2   A0A067RN92   A0A1B6CD05   U5EK54   A0A1B6CTQ5   A0A0J7KWH4   E2A9Q1   A0A0M9A284   A0A1Y1LIF2   A0A1Y1LEP8   A0A154PT19   A0A2A3E345   A0A195FRF1   A0A088AIQ0   A0A151X154   A0A1L8DMG5   E9IZP1   A0A0L7R366   A0A151J789   A0A195CBV2   A0A1L8DLY5   A0A158NIQ9   A0A336MI58   A0A195BZ68   A0A158NIR0   D6X3H5   A0A139WB44   T1IDR3   A0A0P4VGR3   F4WDG8   A0A1B0D1T5   A0A224X9Z3   E2BRP7   A0A2P8YX59   A0A0C9R2D9   T1PL43   A0A1I8MBA0   A0A1I8MB95   E0VKA9   A0A1B6GVV5   A0A069DXX4   A0A1W4W2V1   A0A1W4WDG7   A0A1I8QCE6   A0A1I8QCH8   A0A232F4M3   B4KZ44   K7IW44   A0A0Q9XNR7   A0A182X3K6   A0A182JQX7   A0A084WNH7   A0A182V8M3   A0A182U038   A0A182I3G4   A0A182KRI3   B4N3T4   A0A182PH94   A0A0Q9X2H0   Q7PT06   A7URA4   Q17AC6   A0A182XZ17   A0A1B0C5X3   A0A1B0FMI3   A0A0Q9WSU9   B4LEI8   A0A0K8VAM6   A0A0P9C1Y0   B4IWN2   A0A1B0A758   A0A1A9VNB0   A0A034V3M2   B3M7V9   A0A034V7Z4   A0A0R3P3K9   B4GR64   D0QWT1   A0A182JK12   A0A0K8SRD6   B0WW64   A0A1B0BXR4   A0A146LPR9   A0A0A1X7R1   A0A182ML99   Q2M0S2   A0A3B0JRE6   W8BBY5   A0A2R7VN87   W8B277   A0A182NH62  

Pubmed

19121390    22118469    26354079    30249741    24508170    24845553    + More
20798317    28004739    21282665    21347285    18362917    19820115    27129103    21719571    29403074    25315136    20566863    26334808    28648823    17994087    20075255    24438588    20966253    12364791    17510324    25244985    25348373    15632085    19859648    26823975    25830018    24495485   

EMBL

BABH01011183    BABH01011184    BABH01011185    BABH01011186    ODYU01011424    SOQ57153.1    + More
NWSH01002504    PCG68133.1    PCG68131.1    AGBW02008322    OWR53668.1    KQ458714    KPJ05430.1    KQ768090    OAD53194.1    NEVH01026136    PNF14522.1    QOIP01000007    RLU21057.1    KK107152    EZA57067.1    KK852570    KDR21164.1    GEDC01025980    GEDC01025429    JAS11318.1    JAS11869.1    GANO01001940    JAB57931.1    GEDC01020500    GEDC01003483    JAS16798.1    JAS33815.1    LBMM01002611    KMQ94594.1    GL437918    EFN69853.1    KQ435758    KOX75795.1    GEZM01057720    JAV72120.1    GEZM01057721    JAV72119.1    KQ435207    KZC15059.1    KZ288408    PBC26118.1    KQ981285    KYN43175.1    KQ982603    KYQ53967.1    GFDF01006530    JAV07554.1    GL767232    EFZ13948.1    KQ414663    KOC65330.1    KQ979695    KYN19702.1    KQ978068    KYM97578.1    GFDF01006663    JAV07421.1    ADTU01017067    ADTU01017068    UFQS01001052    UFQT01001052    SSX08727.1    SSX28639.1    KQ976394    KYM93213.1    KQ971374    EEZ97422.2    KYB25140.1    ACPB03002180    GDKW01003089    JAI53506.1    GL888087    EGI67748.1    AJVK01022329    AJVK01022330    GFTR01008702    JAW07724.1    GL449978    EFN81641.1    PYGN01000306    PSN48824.1    GBYB01007007    JAG76774.1    KA649467    KA649669    AFP64096.1    DS235241    EEB13815.1    GECZ01003213    JAS66556.1    GBGD01000149    JAC88740.1    NNAY01000997    OXU25562.1    CH933809    EDW17841.1    KRG05784.1    ATLV01024605    KE525352    KFB51771.1    APCN01000208    CH964095    EDW79289.2    KRF99042.1    AAAB01008807    EAA04731.5    EDO64546.1    CH477336    EAT43235.1    JXJN01026284    CCAG010014702    CH940647    KRF84159.1    EDW69073.2    GDHF01016406    JAI35908.1    CH902618    KPU77657.1    CH916366    EDV96258.1    GAKP01021061    JAC37891.1    EDV38832.2    GAKP01021062    JAC37890.1    CH379069    KRT07708.1    CH479188    EDW40249.1    FJ821035    ACN94773.1    GBRD01009936    JAG55888.1    DS232139    EDS35896.1    JXJN01022303    GDHC01009863    JAQ08766.1    GBXI01007356    JAD06936.1    AXCM01004161    EAL30857.3    OUUW01000002    SPP76269.1    GAMC01019186    JAB87369.1    KK854004    PTY09017.1    GAMC01019184    JAB87371.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000235965    UP000279307    + More
UP000053097    UP000027135    UP000036403    UP000000311    UP000053105    UP000076502    UP000242457    UP000078541    UP000005203    UP000075809    UP000053825    UP000078492    UP000078542    UP000005205    UP000078540    UP000007266    UP000015103    UP000007755    UP000092462    UP000008237    UP000245037    UP000095301    UP000009046    UP000192223    UP000095300    UP000215335    UP000009192    UP000002358    UP000076407    UP000075881    UP000030765    UP000075903    UP000075902    UP000075840    UP000075882    UP000007798    UP000075885    UP000007062    UP000008820    UP000076408    UP000092460    UP000092444    UP000008792    UP000007801    UP000001070    UP000092445    UP000078200    UP000001819    UP000008744    UP000075880    UP000002320    UP000075883    UP000268350    UP000075884   

PRIDE

H9IZ62   

Pfam

PF00008   EGF        + More
PF00754   F5_F8_type_C
PF02210   Laminin_G_2
PF01648   ACPS

Interpro

IPR000421   FA58C        + More
IPR013320   ConA-like_dom_sf       
IPR029831   Caspr2       
IPR008278   4-PPantetheinyl_Trfase_dom       
IPR037143   4-PPantetheinyl_Trfase_dom_sf       
IPR000742   EGF-like_dom       
IPR001791   Laminin_G       
IPR008979   Galactose-bd-like_sf       
IPR003585   Neurexin-like       

SUPFAM

SSF49899   SSF49899        + More
SSF49785   SSF49785       
SSF56214   SSF56214       

Gene 3D

2.60.120.260     3.90.470.20    

CDD

cd00057  FA58C

ProteinModelPortal

H9IZ62   A0A2H1WVR4   A0A2A4J9Q9   A0A2A4J838   A0A212FIV0   A0A194QKI5   + More
A0A310S6B2   A0A2J7PDX5   A0A3L8DKW2   A0A026WLY2   A0A067RN92   A0A1B6CD05   U5EK54   A0A1B6CTQ5   A0A0J7KWH4   E2A9Q1   A0A0M9A284   A0A1Y1LIF2   A0A1Y1LEP8   A0A154PT19   A0A2A3E345   A0A195FRF1   A0A088AIQ0   A0A151X154   A0A1L8DMG5   E9IZP1   A0A0L7R366   A0A151J789   A0A195CBV2   A0A1L8DLY5   A0A158NIQ9   A0A336MI58   A0A195BZ68   A0A158NIR0   D6X3H5   A0A139WB44   T1IDR3   A0A0P4VGR3   F4WDG8   A0A1B0D1T5   A0A224X9Z3   E2BRP7   A0A2P8YX59   A0A0C9R2D9   T1PL43   A0A1I8MBA0   A0A1I8MB95   E0VKA9   A0A1B6GVV5   A0A069DXX4   A0A1W4W2V1   A0A1W4WDG7   A0A1I8QCE6   A0A1I8QCH8   A0A232F4M3   B4KZ44   K7IW44   A0A0Q9XNR7   A0A182X3K6   A0A182JQX7   A0A084WNH7   A0A182V8M3   A0A182U038   A0A182I3G4   A0A182KRI3   B4N3T4   A0A182PH94   A0A0Q9X2H0   Q7PT06   A7URA4   Q17AC6   A0A182XZ17   A0A1B0C5X3   A0A1B0FMI3   A0A0Q9WSU9   B4LEI8   A0A0K8VAM6   A0A0P9C1Y0   B4IWN2   A0A1B0A758   A0A1A9VNB0   A0A034V3M2   B3M7V9   A0A034V7Z4   A0A0R3P3K9   B4GR64   D0QWT1   A0A182JK12   A0A0K8SRD6   B0WW64   A0A1B0BXR4   A0A146LPR9   A0A0A1X7R1   A0A182ML99   Q2M0S2   A0A3B0JRE6   W8BBY5   A0A2R7VN87   W8B277   A0A182NH62  

PDB

3POY     E-value=5.75691e-28,     Score=313

KEGG

101742657    no KO assigned | (RefSeq) neurexin-4

GO

GO:0016021   GO:0000287   GO:0008897   GO:0072553   GO:0008039   GO:0061343   GO:0019991   GO:0005886   GO:0021682   GO:0048786   GO:0035151   GO:0003015   GO:0097105   GO:0060857   GO:0007391   GO:0005919   GO:0008366   GO:0005515   GO:0007018   GO:0016020   GO:0003779   GO:0008270   GO:0006511   GO:0005525   GO:0016491   GO:0003824  

PANTHER

PTHR15036:SF33  

Length:

1031

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.28596

Exp number, first 60 AAs:

0.00024

Total prob of N-in:

0.00019

outside

1  -  966

TMhelix

967  -  989

inside

990  -  1031

 

 

Pi

278.695421

Theta

163.957856

Tajima's D

2.220787

CLR

0.367983

CSRT

0.911654417279136

Interpretation

Uncertain