Gene

KWMTBOMO05369

Annotation

olfactory_receptor_20_[Bombyx_mori]

Location

Bomo_Chr9(+):15689825-15696507      View in EpiBrowser

Full name

Odorant receptor      

Location in the cell

PlasmaMembrane   Reliability : 4.578

CDS

ATGATCCAAGCCAGTAAATATCCAAACAGCAAGACTAAAGAATTATTCAGAAAAATCGCTCACATCGCTTATATTTGTGGCCTACCAAATTTTTGGATCGAAGAACTGAACCTACCGAAGAGTTTCATTCGAGTTTACGATAAAATAGTGCGCATTTTCAATGTGGCAACATACTTTTTTCTTGGTATAGAAATTGCCGCGCACTTTACCCAGCACCATTTGACGAATAAGCAAAAATTTGATTTGCTTCTGTACAGTATATCCCACCCGATCCTCAACGGCTATGGCGTAATTGTTTCCAGACAAGTTGGGAACGTAAAAAAGGTTTTGTTGGACTTAATCGTGAATTTGAAGGTAAAATACAATGACCCTGTCATTGAGGAGGCGATGATAAAGATTTCAATGACGTATTCCGTGTCTTTTATTACAAATTGCGTTCTGTCGATGCTCACGTATACTTTTGACGCTTTGCTGATGGTTTACAAAAAAGGTGTAACATTCAACGTTATAATAACAGCGTGGCCAGATGTGGAAGACACTACAACTGAAGCTAGCATCGGCAGAATAGGTTTCCACATTTTCTGGTGGTTATTTGTGACACGGCCGTTCGCAGTTTATGTATTGGTGATTAACTTGACAACTTGCTTGAGTCACCAGTACATGAACTTACAAAGCTATTTTTTTCATCTCGAGGATATTTTTAAAGAAAATCTCAGTCAGAACGAAAAGGAAGCGAAATACGAAGCGGAGTACAAAATAGGGGTTATGCTTCATGCAAATACGTTGAGATGTACAAGGAGATGTCATATGGTATGGAACGGCGTTATGAGTGGTCAAATTATATTTAACATCAGTCTAATTGTCATAATTATGGCTCAGATGATGAATTCAGACCGGACGCTCGTAAACACTTTTGGTACTGTACTAACCGCATCAGCCATTCTTATCAGCACCGGTTTCTTCATGTGGAATGCTGGTGACGTCACAGTTCAGGCATCTCGTCTAGCGACAGCAATGTACTGCTCCGGGTGGCAGAACTGTCGCGGGAAATCATCAGTCAGCATAAGGAATATGGTGATGAACACGATAGCCGTCGCTCAGCGGCCGCTTGTATTAAGAGGACTCGGAGTAATAGATTTATCATATCAATCGTATTTATCGATTGTAAAAGCGTCGTACACTGTATTTTCTGTGATCTATTAA

Protein

MIQASKYPNSKTKELFRKIAHIAYICGLPNFWIEELNLPKSFIRVYDKIVRIFNVATYFFLGIEIAAHFTQHHLTNKQKFDLLLYSISHPILNGYGVIVSRQVGNVKKVLLDLIVNLKVKYNDPVIEEAMIKISMTYSVSFITNCVLSMLTYTFDALLMVYKKGVTFNVIITAWPDVEDTTTEASIGRIGFHIFWWLFVTRPFAVYVLVINLTTCLSHQYMNLQSYFFHLEDIFKENLSQNEKEAKYEAEYKIGVMLHANTLRCTRRCHMVWNGVMSGQIIFNISLIVIIMAQMMNSDRTLVNTFGTVLTASAILISTGFFMWNAGDVTVQASRLATAMYCSGWQNCRGKSSVSIRNMVMNTIAVAQRPLVLRGLGVIDLSYQSYLSIVKASYTVFSVIY

Similarity

Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.

Feature

chain  Odorant receptor

Uniprot

C4B7V1   A7E3G3   A0A0P1IVT1   A0A2A4J6Z3   A0A0S1TPH0   A0A1B3B736   + More
A0A075TD77   A0A1W5T543   A0A076E9B5   A0A076E7I6   A0A0P1IW73   A0A2H1V308   A0A1B3B743   A0A2K8GKR3   A0A097ITX4   A0A2L1TG43   A0A0B5CN09   A0A0P1IVQ9   Q6A1J3   A0A2H1V355   A0A0B5GIB9   A0A0B5A1G3   A0A146JW15   A0A1X9PBW3   A0A0K8TVB3   A0A0E4B3W6   A0A0K8TU59   A0A1V1WBU5   A0A223HDF4   A0A097IYK2   A0A345BEY1   A0A2A4JBI2   A0A0B5CVM5   A0A223HD79   A0A0B5GUX0   A0A2A4J5Z4   A0A075T650   H9A5Q2   A0A2A4J9Y6   A0A223HD69   A0A097ITW0   A0A0V0J201   A0A345BEX6   A0A076E7L0   A0A223HD37   A0A076E611   A0A223HD26   A0A2K8GL46   E1ACG2   M1QVM8   A0A223HD28   A0A345BEX5   A0A2L1TG92   A0A0P1J400   A0A075T629   A7E3G2   Q0EEG1   A0A0S1TPQ8   A0A1B3B764   U5NJ19   A0A2H1WY92   A0A2L1TG66   A0A2A4JBH1   A0A223HDG0   A0A223HDE8   A0A223HD63   A0A3Q8HD97   A0A1V1WBU9   A0A2A4JAB0   A0A075TD59   A0A223HDE3   A0A2A4J6F5   A0A146JYX6   A0A1Y9TJJ8   A0A1B3P5L3   C4B7U9   A0A223HDF2   A0A1B3P5N2   A0A2H1VNT8   Q6A1J5   A0A0E4B432   C4B7U2  

Pubmed

19427209    17257213    26812239    25027790    28366786    24998398    + More
28736530    25252791    15289611    26017144    28150741    29727827    22363688    27006164    29375398    20725598    23679893    23894529    27538507   

EMBL

AB472100    BAH66317.1    BK005928    DAA05978.1    LN885119    CUQ99408.1    + More
NWSH01002810    PCG67496.1    KR935725    ALM26217.1    KT588118    AOE48028.1    KF768702    AIG51896.1    KY825770    ARF06964.1    KF487691    AII01089.1    KF487654    AII01052.1    LN885130    CUQ99419.1    ODYU01000446    SOQ35228.1    KT588127    AOE48037.1    KX585327    ARO70220.1    KM597231    AIT69908.1    KY707202    AVF19644.1    KM678332    AJE25905.1    LN885104    CUQ99393.1    AJ748336    CAG38122.1    SOQ35229.1    KM892406    AJF23821.1    KJ542673    AJD81557.1    GEDO01000059    JAP88567.1    KX084488    ARO76443.1    GCVX01000220    JAI18010.1    LC002732    BAR43480.1    GCVX01000213    JAI18017.1    GENK01000078    JAV45835.1    KY283757    AST36416.1    KM655563    AIT72012.1    MG816620    AXF48805.1    NWSH01002259    PCG68782.1    KM678325    AJE25898.1    KY283678    AST36337.1    KM892399    AJF23814.1    PCG67495.1    KF768701    AIG51895.1    JN836702    AFC91742.1    PCG68781.1    KY283671    AST36330.1    KM597225    AIT69902.1    GDKB01000055    JAP38441.1    MG816615    AXF48800.1    KF487679    AII01077.1    KY283622    AST36281.1    KF487693    AII01091.1    KY283619    AST36278.1    KY225510    ARO70522.1    HM595406    LN885100    ADM32898.1    CUQ99389.1    JX999589    AGG08879.1    KY283628    AST36287.1    MG816614    AXF48799.1    KY707218    AVF19660.1    LN885101    CUQ99390.1    KF768676    AIG51870.1    BK005927    DAA05977.1    AB234349    BAF31189.1    KR935716    ALM26208.1    KT588150    AOE48060.1    KC960482    AGY14593.1    ODYU01011979    SOQ58031.1    KY707225    AVF19667.1    PCG68780.1    KY283746    AST36405.1    KY283743    AST36402.1    KY283667    AST36326.1    MF625594    AXY83421.1    GENK01000081    JAV45832.1    PCG68779.1    KF768677    AIG51871.1    KY283748    AST36407.1    NWSH01002695    PCG67665.1    GEDO01000025    JAP88601.1    KX084495    ARO76450.1    KX655957    AOG12906.1    AB472098    BAH66315.1    KY283750    AST36409.1    KX655966    AOG12915.1    ODYU01003551    SOQ42466.1    AJ748334    CAG38120.1    LC002730    BAR43478.1    AB472091    BAH66308.1   

Proteomes

UP000218220   

PRIDE

C4B7V1    A7E3G3    A7E3G2    Q0EEG1    C4B7U9    C4B7U2    + More

Pfam

PF02949   7tm_6

Interpro

IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

C4B7V1   A7E3G3   A0A0P1IVT1   A0A2A4J6Z3   A0A0S1TPH0   A0A1B3B736   + More
A0A075TD77   A0A1W5T543   A0A076E9B5   A0A076E7I6   A0A0P1IW73   A0A2H1V308   A0A1B3B743   A0A2K8GKR3   A0A097ITX4   A0A2L1TG43   A0A0B5CN09   A0A0P1IVQ9   Q6A1J3   A0A2H1V355   A0A0B5GIB9   A0A0B5A1G3   A0A146JW15   A0A1X9PBW3   A0A0K8TVB3   A0A0E4B3W6   A0A0K8TU59   A0A1V1WBU5   A0A223HDF4   A0A097IYK2   A0A345BEY1   A0A2A4JBI2   A0A0B5CVM5   A0A223HD79   A0A0B5GUX0   A0A2A4J5Z4   A0A075T650   H9A5Q2   A0A2A4J9Y6   A0A223HD69   A0A097ITW0   A0A0V0J201   A0A345BEX6   A0A076E7L0   A0A223HD37   A0A076E611   A0A223HD26   A0A2K8GL46   E1ACG2   M1QVM8   A0A223HD28   A0A345BEX5   A0A2L1TG92   A0A0P1J400   A0A075T629   A7E3G2   Q0EEG1   A0A0S1TPQ8   A0A1B3B764   U5NJ19   A0A2H1WY92   A0A2L1TG66   A0A2A4JBH1   A0A223HDG0   A0A223HDE8   A0A223HD63   A0A3Q8HD97   A0A1V1WBU9   A0A2A4JAB0   A0A075TD59   A0A223HDE3   A0A2A4J6F5   A0A146JYX6   A0A1Y9TJJ8   A0A1B3P5L3   C4B7U9   A0A223HDF2   A0A1B3P5N2   A0A2H1VNT8   Q6A1J5   A0A0E4B432   C4B7U2  

KEGG

100127035    K22984 odorant receptor | (RefSeq) Or-20, BmOr-20, Or20; olfactory receptor 20

GO

GO:0007165   GO:0016021   GO:0004984   GO:0005886   GO:0005549   GO:0007608   GO:0016020   GO:0003779   GO:0008270   GO:0006511   GO:0005525   GO:0016491   GO:0003824  

PANTHER

PTHR21137  

Subcellular location

Cell membrane  

Length:

400

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

129.34971

Exp number, first 60 AAs:

11.95896

Total prob of N-in:

0.93699

POSSIBLE N-term signal

sequence

inside

1  -  49

TMhelix

50  -  72

outside

73  -  81

TMhelix

82  -  99

inside

100  -  136

TMhelix

137  -  159

outside

160  -  192

TMhelix

193  -  212

inside

213  -  269

TMhelix

270  -  292

outside

293  -  301

TMhelix

302  -  324

inside

325  -  400

 

 

Pi

324.789911

Theta

178.842053

Tajima's D

2.652061

CLR

0.33323

CSRT

0.956402179891005

Interpretation

Uncertain