SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05363
Annotation
PREDICTED:_palmitoyltransferase_ZDHHC6-like_[Bombyx_mori]
Full name
Palmitoyltransferase      
Location in the cell
PlasmaMembrane   Reliability : 3.383
 

Sequence

CDS
ATGGTTCTCTCTCCGTTTCGACGATTATTGCACTGGGGTCCCATATCGGTTTTAGGTATAATAAAATTAATAACATGGGCCATGGTCCACATGCTGGGAATGTGGTGGCCCCCTCAAACTTCATTCTATGCATCGCTTCATGCAGCAATGTTCCTGTCATTTGCTGCGGGAACATTATATTATTTCTTGCAATCATTACTTGAGGGACCTGGGTTCGTGCCTTTGGGATGGCAGCCTGACAAAGAAGAGGATGCCCAATATCTACAATTTTGCACAATTTGTAAAGGATACAAGGCTCCACGGTCACACCACTGTAGGAAATGTGGCTTGTGCGTTTTGAAGATGGACCATCATTGCCCGTGGATAAATTGTTGCGTTGGTCACGCTAACCATGGGTATTTCACTACTTTTCTAATGTTTGCAGTTCTTGGCTGCTTCCATGCCTCTGTAGTATTATCCATTTGTATGTATCATGCGATAAATCGGATATGGTACATCCACCACGGCTCCGGTGACGAGCCCATGATCTACGTCACTTTGACTACTTTACTGCTGACCCTACTCTCAATAGGGATGGCTGTTGGTGTAGTACTCGCTGTTGGTACATTACTTTATTTGCAGATTCGAGGCATACTTCGTAATCAGACCACGATCGAGGACTGGATCATGGAAAAAGCTGCAGGTAGACGAGAAGAACAGGGTCTGCCTCCGTTCGTGTTCCCTTACGACGTGGGCTGGAAGAGGAATATAGCTTCGGTGCTGTCTCGGAGTAGAGGGGATGGAATCCGGTGGCCCTTGAAGGATGGCTGTGGCCAGTATGATCTGACCCGCGAGCAGCAGGCGCAGAAGGCGGACAAGCGCGTGCGGGCGCGCCTGTACGTGTGCCGCGCGGCCTACTCCGGGCGCTGGTGTCCGCTGGCGCAGCACCCCCGCGCCGCGCTGGCGCCGCCCTGCACGGACGAGCCGCGCCTGCCGCTGGCGCCGGGCGACGCGCTGCGGGCCACGCGCCACCGCCGCCACTGGCTGTTCGGCGAGCGGCTGGCGGGCGCCGGCGGGGGCGAGGGCGGGGCGCGGGGGCCGCGGGGCTGGTTCCCGCGCAACTGCGTGCTGCCCGAGCGCGACCCCGCCAAAGCCAAGCCCAACTAG
Protein
MVLSPFRRLLHWGPISVLGIIKLITWAMVHMLGMWWPPQTSFYASLHAAMFLSFAAGTLYYFLQSLLEGPGFVPLGWQPDKEEDAQYLQFCTICKGYKAPRSHHCRKCGLCVLKMDHHCPWINCCVGHANHGYFTTFLMFAVLGCFHASVVLSICMYHAINRIWYIHHGSGDEPMIYVTLTTLLLTLLSIGMAVGVVLAVGTLLYLQIRGILRNQTTIEDWIMEKAAGRREEQGLPPFVFPYDVGWKRNIASVLSRSRGDGIRWPLKDGCGQYDLTREQQAQKADKRVRARLYVCRAAYSGRWCPLAQHPRAALAPPCTDEPRLPLAPGDALRATRHRRHWLFGERLAGAGGGEGGARGPRGWFPRNCVLPERDPAKAKPN

Summary

Catalytic Activity
hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein]
Similarity
Belongs to the DHHC palmitoyltransferase family.
EC Number
2.3.1.225
EMBL
NWSH01002259    PCG68771.1    ODYU01000898    SOQ36350.1    KQ458714    KPJ05438.1    + More
AGBW02012297    OWR45252.1    RSAL01000148    RVE45830.1    KQ460864    KPJ11805.1    PCG68770.1    KQ971311    EEZ99000.2    GBBI01003539    JAC15173.1    GBGD01001808    JAC87081.1    GFTR01006050    JAW10376.1    GECL01001197    JAP04927.1    GEDC01006206    JAS31092.1    GDKW01001864    JAI54731.1    GBHO01002667    GBRD01002144    JAG40937.1    JAG63677.1    GFDF01002756    JAV11328.1    GDRN01063555    JAI64961.1    GFDF01002757    JAV11327.1    AXCN02000387    GGFL01006239    MBW70417.1    ADMH02000121    ETN67680.1    CH916374    EDV91478.1    CH933806    EDW15426.1    CCAG010020908    EZ423386    ADD19662.1    JXJN01016128    GEZM01095997    JAV55217.1    CP012526    ALC46572.1    GEBQ01016601    JAT23376.1    NEVH01019371    PNF22756.1    CH940650    EDW67983.1    GAMC01010720    JAB95835.1    ATLV01021848    KE525324    KFB46931.1    GBXI01014843    JAC99448.1    AAAB01008963    EAA12087.6    GDHF01030275    JAI22039.1    APCN01004903    GAKP01006584    JAC52368.1    GGFK01004049    MBW37370.1    GFDL01002671    JAV32374.1    OUUW01000005    SPP80488.1    GFDL01002689    JAV32356.1    CH902617    EDV42373.1    CH480815    EDW42458.1    GGFJ01005830    MBW54971.1    CM000070    EAL27167.1    GANO01002807    JAB57064.1    CM000364    EDX13216.1    AE014297    BT082042    AAF54805.1    ACO72879.1    CH479198    EDW28075.1    AJWK01009735    AJWK01009736    KK115334    KFM64826.1    GFDF01002760    JAV11324.1    CM000160    EDW97096.1    GFDF01002761    JAV11323.1    CH954181    EDV49372.1    NNAY01000882    OXU26078.1    APGK01039372    KB740970    ENN76649.1    CH477912    EAT35099.1    GAPW01001640    JAC11958.1    JRES01000501    KNC30641.1    DS235184    EEB13059.1    GL732613    EFX71118.1    KK107293    QOIP01000005    EZA53399.1    RLU22667.1    PZQS01000001    PVD39528.1    GL439905    EFN66648.1    GDIQ01207161    JAK44564.1    GBYB01003838    JAG73605.1    GFAA01001216    JAU02219.1    ABJB010303371    ABJB010613420    DS949079    EEC18839.1    GEDV01001859    JAP86698.1    GEFH01005021    JAP63560.1    KRF83598.1    JXUM01093682    KQ564073    KXJ72828.1    GACK01003384    JAA61650.1    GFAC01002187    JAT97001.1    GEFM01005528    JAP70268.1    GDIQ01190468    GDIQ01162778    GDIP01054921    LRGB01000687    JAK61257.1    JAM48794.1    KZS16825.1    KZ288416    PBC26049.1    GFPF01013446    MAA24592.1    KK852667    KDR18933.1   
Pfam
PF01529   DHHC        + More
PF07653   SH3_2
PF14664   RICTOR_N
PF14663   RasGEF_N_2
PF14666   RICTOR_M
PF01156   IU_nuc_hydro
Interpro
IPR001594   Palmitoyltrfase_DHHC        + More
IPR036028   SH3-like_dom_sf       
IPR001452   SH3_domain       
IPR036452   Ribo_hydro-like       
IPR029451   RICTOR_M       
IPR008658   KAP3       
IPR001910   Inosine/uridine_hydrolase_dom       
IPR016024   ARM-type_fold       
IPR029453   Rictor_IV       
IPR011989   ARM-like       
IPR028267   Pianissimo_N       
IPR000225   Armadillo       
SUPFAM
SSF50044   SSF50044        + More
SSF48371   SSF48371       
SSF53590   SSF53590       
Gene 3D
PDB
6BMS     E-value=3.57619e-13,     Score=181

Ontologies

Topology

Length:
381
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
92.8292599999999
Exp number, first 60 AAs:
40.25718
Total prob of N-in:
0.46809
POSSIBLE N-term signal
sequence
inside
1  -  8
TMhelix
9  -  31
outside
32  -  40
TMhelix
41  -  63
inside
64  -  137
TMhelix
138  -  160
outside
161  -  174
TMhelix
175  -  206
inside
207  -  381
 
 

Population Genetic Test Statistics

Pi
308.120002
Theta
181.034584
Tajima's D
2.179673
CLR
0.101356
CSRT
0.912304384780761
Interpretation
Uncertain
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