Gene

KWMTBOMO05360  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002379

Annotation

PREDICTED:_dynactin_subunit_4_[Papilio_machaon]

Location

Bomo_Chr9(-):15491297-15495965      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.696

CDS

ATGGCATATTTAACTCAACCTGATTATGTGAGATACATTTGTACTTGCGGTCAACTGAAACCAATCACTAGTTTATACTTCTGTCGGCATTGTTTGAAAATACGTTGCGGTTTTTGTATTTGTCATGAGGTCGACTCACATTATTGTCCGAACTGCCTCGAGAATATGCCATCATCAGAAGCCAGATTAAAGAAGAACCGTTGCAGCAGCTGCTTCGATTGTCCCAGTTGCTACCACACTTTGTCCACCAGAGCTAGCCTGGTCCAACCTCGGCAGCAAGAAGGTGCTGGAGATGGGAAAGTAGAAAACAAACATCAAAAAAAGATGTACTATTTAGCTTGTTTCAATTGTAGATGGACATCTAGAGATGTGGGAATTCCTGATCAGCCTGTTGCATCAGGTGGATGGCCAGAGAGACCAAATCCATTTGCAACACAAATCAATCAACTCTTAGAATATTACAAGGCAATAGCATTACAAGAGAAACAGGAGAAAATTGAAAAAGAAAGAAAAAAGTTTGCCATCAGAGGGAAATACCTAACACTCACTGATAAAACGGGCTTAACTGGAGCTATGGCAAGGAACATAGCAGGACTTCCATCTTCCGACTCTGGGTCATCGTCCATTATCGCCAAATTCGTTCCAAGCCAAGCCAGTGCAGAAGTTGAGGAATTGCCCGAAGATTATTTCACTAAAGAAGTCAACTTGAATCAGATAACCAGTATGCCTCAACGCCTTCTATCACCGGAGTGGCAGCCTACTGATGTTTCAAGACTGCATCCAATAGCTAAACTATTGAGTGTAAAACGTAGCCAACGGTGCAGGGAGTGTGACCACAATCTGACTAAACCAGAGTATAATCCGGGCTCTATAAAATTCAAGATTGAGTTACTGGCTTTTTATCACATACCCGAAGTGAAAATAATATCATACGAACCCATGAAGGCAGGTGAGAATTCAACTGTGTTGTTGAAACTGAGCAATCCAACTGCTCACGAAATGACATTATGCCTGATGAATCCTGAAGATATACCGCAAGTGGACAATGAGGAAGAGCAACTTGAAAATTCACTTGAGAAATCACTCACTTTGGACAAGGAGTCCGCGGCGTGCAAGCCGGCCGCCGCGCCCGCTTGGCGCCGCGCCGCCGCGCCGTGCGTCCGCGCCGTCGGGCCGCCCGTGCGCGTCTCCGTGCCGCAGCGCGACGACGCCGCCGAGTACGACGACGACGCCACGCACGACGCTAACGATGTAATCGTGTGGCGAAAGGCGAACAAGCTGGGCGTCCGTCTGCAGGTGGCGACGGAGGCGGCGGCGTCGCGGGGCGGCGCGGCGCTGCTGGCGCTGGCCCTCCAGTACTCGTACCGCAATACGGTGCCGCCCGCCGCCAACGCGCCGAACCAGAGGAATCATATTCTGTACACGACGGCGTTGCTCTCACTGGGAAACGTAGCTTAA

Protein

MAYLTQPDYVRYICTCGQLKPITSLYFCRHCLKIRCGFCICHEVDSHYCPNCLENMPSSEARLKKNRCSSCFDCPSCYHTLSTRASLVQPRQQEGAGDGKVENKHQKKMYYLACFNCRWTSRDVGIPDQPVASGGWPERPNPFATQINQLLEYYKAIALQEKQEKIEKERKKFAIRGKYLTLTDKTGLTGAMARNIAGLPSSDSGSSSIIAKFVPSQASAEVEELPEDYFTKEVNLNQITSMPQRLLSPEWQPTDVSRLHPIAKLLSVKRSQRCRECDHNLTKPEYNPGSIKFKIELLAFYHIPEVKIISYEPMKAGENSTVLLKLSNPTAHEMTLCLMNPEDIPQVDNEEEQLENSLEKSLTLDKESAACKPAAAPAWRRAAAPCVRAVGPPVRVSVPQRDDAAEYDDDATHDANDVIVWRKANKLGVRLQVATEAAASRGGAALLALALQYSYRNTVPPAANAPNQRNHILYTTALLSLGNVA

Uniprot

H9IYP5   A0A2A4IV45   A0A3S2NAG8   A0A0N1IAF4   A0A194QPN2   A0A212EUT8   + More
A0A2H1V6E3   A0A2J7PY88   A0A1Y1JZ50   D6X4D7   A0A3R7M8D9   A0A0P4VW45   T1IG42   A0A069DZ40   K7J4L4   A0A151I3X3   E2BDW5   A0A0C9R983   A0A0V0GAT3   A0A1B6JFK8   A0A1B6DNW3   A0A0P4W2P9   A0A224XBS8   A0A1W4WQT5   A0A1B6FV03   B4LJG9   A0A0N0BC75   A0A026WAB7   A0A158NYM2   E9JDH4   F4WXY9   T1GM44   A0A0K8TMS8   A0A1J1HKN3   A0A067QMH3   A0A1Q3G1N4   J7G8Y8   A0A1Q3G1Q4   A0A1Q3G1R1   Q17AJ7   A0A1Q3G1V0   A0A0A9X5U0   A0A1Q3G1K6   A0A0A1XLE9   A0A154NY09   A0A0L7RH23   W8CCU5   A0A0K8TWA1   A0A084VC99   B4HR53   Q7K130   A0A1B0GN13   A0A034W8J4   A0A182IWX8   B4J7Z7   A0A0M4EHH9   B3N9V6   B4N653   A0A0K8RIH6   V5HDN0   B4QEQ8   A0A182NED6   B4P1T3   A0A1B0CAC1   A0A0K8VVY5   A0A3B0J2Z4   B4KPR2   Q290Q3   A0A1B0CK06   A0A1W4WB48   B3MHS5   A0A182QQ57   B4GBE3   Q17AJ6   A0A1Z5KWK4   A0A088ADL4   A0A182URW3   Q7PNK5   A0A182RKC8   A0A182JXB4   A0A182XNK4   A0A1L8E5D8   A0A1B0GGF6   A0A1B0AT09   A0A182HMV7   A0A224YXK6   A0A131YPU0   A0A1A9YGV5   A0A131XNP4   U4TYN6   A0A182TUX7   A0A2M4AME9   A0A1I8N7K1   B7PEE3   T1JF52   D3TQ10  

Pubmed

19121390    26354079    22118469    28004739    18362917    19820115    + More
27129103    26334808    20075255    20798317    17994087    24508170    21347285    21282665    21719571    26369729    24845553    17510324    25401762    26823975    25830018    24495485    24438588    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    25765539    22936249    17550304    15632085    28528879    12364791    14747013    17210077    28797301    26830274    28049606    23537049    25315136    20353571   

EMBL

BABH01011158    BABH01011159    NWSH01007004    PCG63154.1    RSAL01000148    RVE45833.1    + More
KQ459934    KPJ19264.1    KQ458714    KPJ05441.1    AGBW02012297    OWR45255.1    ODYU01000898    SOQ36346.1    NEVH01020850    PNF21260.1    GEZM01099075    JAV53511.1    KQ971410    EEZ97538.1    QCYY01001738    ROT75734.1    GDKW01000281    JAI56314.1    ACPB03002684    GBGD01001305    JAC87584.1    AAZX01002331    KQ976471    KYM84027.1    GL447693    EFN86091.1    GBYB01009432    JAG79199.1    GECL01001151    JAP04973.1    GECU01009747    JAS97959.1    GEDC01016284    GEDC01009922    GEDC01008476    JAS21014.1    JAS27376.1    JAS28822.1    GDRN01089647    JAI60618.1    GFTR01006601    JAW09825.1    GECZ01019711    GECZ01015733    GECZ01011820    GECZ01011367    JAS50058.1    JAS54036.1    JAS57949.1    JAS58402.1    CH940648    EDW61537.1    KQ435944    KOX68241.1    KK107295    EZA52995.1    ADTU01004054    GL771866    EFZ09136.1    GL888434    EGI60925.1    CAQQ02199958    GDAI01002152    JAI15451.1    CVRI01000006    CRK88090.1    KK853245    KDR09402.1    GFDL01001307    JAV33738.1    JX101463    JX101464    KZ288206    AFP58805.1    PBC33088.1    GFDL01001323    JAV33722.1    GFDL01001315    JAV33730.1    CH477333    EAT43296.1    GFDL01001294    JAV33751.1    GBHO01029456    GBRD01015346    GDHC01010571    JAG14148.1    JAG50480.1    JAQ08058.1    GFDL01001361    JAV33684.1    GBXI01002909    JAD11383.1    KQ434773    KZC03974.1    KQ414596    KOC70001.1    GAMC01003086    JAC03470.1    GDHF01033959    JAI18355.1    ATLV01010627    KE524589    KFB35593.1    CH480816    EDW46796.1    AE013599    AY069420    AAF59211.1    AAL39565.1    AJVK01027889    GAKP01008335    GAKP01008334    JAC50617.1    CH916367    EDW02227.1    CP012524    ALC42022.1    CH954177    EDV59652.1    CH964154    EDW79842.1    GADI01002878    JAA70930.1    GANP01008919    JAB75549.1    CM000362    CM002911    EDX06054.1    KMY92057.1    CM000157    EDW89219.1    AJWK01003628    GDHF01009278    JAI43036.1    OUUW01000001    SPP73572.1    CH933808    EDW09172.1    CM000071    EAL25309.2    AJWK01015591    CH902619    EDV36912.1    AXCN02000860    CH479181    EDW32245.1    EAT43297.1    GFJQ02007474    JAV99495.1    AAAB01008963    EAA12052.5    GFDF01000166    JAV13918.1    CCAG010015359    JXJN01003090    APCN01004916    GFPF01007416    MAA18562.1    GEDV01007580    JAP80977.1    GEFH01000851    JAP67730.1    KB631665    ERL85138.1    GGFK01008581    MBW41902.1    ABJB010110598    ABJB010848507    DS695221    EEC04965.1    JH432146    EZ423512    ADD19788.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000235965    UP000007266    UP000283509    UP000015103    UP000002358    UP000078540    UP000008237    UP000192223    UP000008792    UP000053105    UP000053097    UP000005205    UP000007755    UP000015102    UP000183832    UP000027135    UP000242457    UP000008820    UP000076502    UP000053825    UP000030765    UP000001292    UP000000803    UP000092462    UP000075880    UP000001070    UP000092553    UP000008711    UP000007798    UP000000304    UP000075884    UP000002282    UP000092461    UP000268350    UP000009192    UP000001819    UP000192221    UP000007801    UP000075886    UP000008744    UP000005203    UP000075903    UP000007062    UP000075900    UP000075881    UP000076407    UP000092444    UP000092460    UP000075840    UP000092443    UP000030742    UP000075902    UP000095301    UP000001555   

PRIDE

H9IYP5    Q7K130   

Pfam

PF05502   Dynactin_p62

Interpro

IPR008603   DCTN4        + More
IPR007527   Znf_SWIM       

ProteinModelPortal

H9IYP5   A0A2A4IV45   A0A3S2NAG8   A0A0N1IAF4   A0A194QPN2   A0A212EUT8   + More
A0A2H1V6E3   A0A2J7PY88   A0A1Y1JZ50   D6X4D7   A0A3R7M8D9   A0A0P4VW45   T1IG42   A0A069DZ40   K7J4L4   A0A151I3X3   E2BDW5   A0A0C9R983   A0A0V0GAT3   A0A1B6JFK8   A0A1B6DNW3   A0A0P4W2P9   A0A224XBS8   A0A1W4WQT5   A0A1B6FV03   B4LJG9   A0A0N0BC75   A0A026WAB7   A0A158NYM2   E9JDH4   F4WXY9   T1GM44   A0A0K8TMS8   A0A1J1HKN3   A0A067QMH3   A0A1Q3G1N4   J7G8Y8   A0A1Q3G1Q4   A0A1Q3G1R1   Q17AJ7   A0A1Q3G1V0   A0A0A9X5U0   A0A1Q3G1K6   A0A0A1XLE9   A0A154NY09   A0A0L7RH23   W8CCU5   A0A0K8TWA1   A0A084VC99   B4HR53   Q7K130   A0A1B0GN13   A0A034W8J4   A0A182IWX8   B4J7Z7   A0A0M4EHH9   B3N9V6   B4N653   A0A0K8RIH6   V5HDN0   B4QEQ8   A0A182NED6   B4P1T3   A0A1B0CAC1   A0A0K8VVY5   A0A3B0J2Z4   B4KPR2   Q290Q3   A0A1B0CK06   A0A1W4WB48   B3MHS5   A0A182QQ57   B4GBE3   Q17AJ6   A0A1Z5KWK4   A0A088ADL4   A0A182URW3   Q7PNK5   A0A182RKC8   A0A182JXB4   A0A182XNK4   A0A1L8E5D8   A0A1B0GGF6   A0A1B0AT09   A0A182HMV7   A0A224YXK6   A0A131YPU0   A0A1A9YGV5   A0A131XNP4   U4TYN6   A0A182TUX7   A0A2M4AME9   A0A1I8N7K1   B7PEE3   T1JF52   D3TQ10  

KEGG

101740885    K10426 dynactin 4 | (RefSeq) dynactin subunit 4

GO

GO:0005869   GO:0008270   GO:0007097   GO:0007018   GO:0004729   GO:0006779   GO:0000220   GO:0016020   GO:0006511   GO:0005525   GO:0016491   GO:0003824  

PANTHER

PTHR13034  

Length:

485

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0326400000000001

Exp number, first 60 AAs:

0.01285

Total prob of N-in:

0.00348

outside

1  -  485

 

 

Pi

262.33143

Theta

193.392454

Tajima's D

0.887563

CLR

0

CSRT

0.635268236588171

Interpretation

Uncertain