Silkworm Genome Informatics Database

Gene

KWMTBOMO05350

Pre Gene Modal

BGIBMGA002383

Annotation

PREDICTED:_fibrillin-1-like_[Bombyx_mori]

Location

Bomo_Chr9(-):15308475-15323265 View in EpiBrowser

Location in the cell

Extracellular Reliability : 4.166

CDS

ATGCTGTGTGGAAATGTTTTATCAGTTCTGTTATTCGTCATCGGCGAACGATCATTGTTTTGTGATGCCATAAAAGATGGGAAAGGAGTTGCCACCGTGGACGTACCGGTCATAAGGCAACGTACTCGTTTGGTCTACAATAAGAAAAGATGTCGCGGCAAGACTAACAGCGGCTCGTGCGTTATAACCGAATCATACGTGAGCATTGAGAAGAGTCAATCATGCAAGACCGGCTGGATATATGAGGCGAAGACCGACAGCTGTGTACCGAAATGCACGAGCGGTTGCGTGAACGGAACTTGCGAGGCGCCCGAGGTCTGCACCTGTCTAGAGCCTCTGGTCCTCAGACGCGGACACTGCGTGGAGCCCACGTGTTCACCAGCCTGCGACTCCTACAGCAGCTGCACCGACTTCAACGTGTGCACCTGCGTGAACAACACGATCGCTTTGAACGGCTCCCAGTGCGCCCCCGTGTGCCCCGACGGCTACTACAACGATCCCGTGGAGTGCTCCCCGCGGTGCGAGCGCTGCGTCAACGGCACGTGCACGGAGCCCGGCCTATGCACGTGCGACCCCGGCTACAAGAACATCGATGACGTGTGCGTGCCTAAGTGCTTGGACTGCCGCAACGGCGAGTGCGTGGCTCCCAATGATTGCCTCTGTCACGACAATTACGCCATGAGTAACGGCACGTGCGCCCCTGTGTGCCGCCGGGCCTGCACAAATGGGGCGTGCTCGGAGCCCGATAAGTGCACGTGCGACGATGGCTACCGGTTGAGTCCCGAGGATCCTTTCGTCTGCCTGCCGGTCTGTTCTGAGCGCTGCGTGAACTCTCACTGTTCGTCCCCTAATACGTGCACGTGCTTCAAAGACTACGAGCGTAACGATACGAATTCGAACGTTTGTTACAAGAAATGCGATGGAGCTTGCGAAAATGGCCGGTGCTCTTTGGACGGAGCGTGCGAGTGCGACTCCGGATACATACTGTCCAATGGAACGTGCATAAGAAATAATACAGCGTGCTCCGCGAACTGCAGCGCGGGCGGGGAGGAGTGCGGGCTCGGCAGCGGTTGCCCGTCGGAGCAAACCCACTTCCCCGCCGAAGTTACTTCCGCAGGGCTGGCGGGCTTGCAGATCAGCTGGCTGCTGGGCGGAGCCGTGGGGCTCTTGCTGCTAACGCTCCTACTCGTCGTCATCCACAGAACCTGGAGAAGACGACTGGAACTCGAAAAAAAGATCAAAGAAGACCAAGCAAGCCCCGGCAACTACAGCGTCATGTGCAGCAACCCTAACAGGCTGCTGCAGACCCAGCCCGGTGACGTCACGAGGGGCTACTCCGACGACCTCCCGCCGACAGACGAAACCGAACTCACTTACGAAGTCCCCCTACGAGACGAGAGCTACTGA

Protein

MLCGNVLSVLLFVIGERSLFCDAIKDGKGVATVDVPVIRQRTRLVYNKKRCRGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTCLEPLVLRRGHCVEPTCSPACDSYSSCTDFNVCTCVNNTIALNGSQCAPVCPDGYYNDPVECSPRCERCVNGTCTEPGLCTCDPGYKNIDDVCVPKCLDCRNGECVAPNDCLCHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGTCIRNNTACSANCSAGGEECGLGSGCPSEQTHFPAEVTSAGLAGLQISWLLGGAVGLLLLTLLLVVIHRTWRRRLELEKKIKEDQASPGNYSVMCSNPNRLLQTQPGDVTRGYSDDLPPTDETELTYEVPLRDESY

Uniprot

H9IYP9 A0A0N0PE62 A0A194QKK7 A0A0L7KIC6 A0A2A4J1N9 A0A2H1VX04 + More
A0A0M9AC38 A0A182T601 A0A2A3EI86 A0A182F2V6

Pubmed

19121390 26354079 26227816

EMBL

BABH01011145 KQ459934 KPJ19255.1 KQ458714 KPJ05450.1 JTDY01009749 + More
KOB62821.1 NWSH01004144 PCG65434.1 ODYU01004965 SOQ45369.1 KQ435706 KOX80233.1 KZ288235 PBC31418.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000037510 UP000218220 UP000053105 + More
UP000075901 UP000242457 UP000069272

PRIDE

H9IYP9

Pfam

PF02363 C_tripleX

Interpro

IPR000742   EGF-like_dom        + More
IPR009030   Growth_fac_rcpt_cys_sf
IPR003341   Cys_rich_tripleX
IPR013032   EGF-like_CS

SUPFAM

SSF57184 SSF57184

ProteinModelPortal

H9IYP9 A0A0N0PE62 A0A194QKK7 A0A0L7KIC6 A0A2A4J1N9 A0A2H1VX04 + More
A0A0M9AC38 A0A182T601 A0A2A3EI86 A0A182F2V6

PDB

2YGQ E-value=1.18014e-09, Score=152

KEGG

101737880 no KO assigned | (RefSeq) fibrillin-1-like

GO

GO:0016021 GO:0005515 GO:0008237 GO:0008241 GO:0016020 GO:0008270 GO:0006511 GO:0005525 GO:0016491 GO:0003824

SignalP

Position: 1 - 21, Likelihood: 0.745933

Length:

468

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.12671

Exp number, first 60 AAs:

0.03665

Total prob of N-in:

0.00231

outside

1 - 376

TMhelix

377 - 399

inside

400 - 468

Pi

34.336616

Theta

39.615765

Tajima's D

-0.725761

CLR

24.542396

CSRT

0.190440477976101

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics