Gene
KWMTBOMO05346
Pre Gene Modal
BGIBMGA002532
Annotation
PREDICTED:_uncharacterized_protein_LOC101740249_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 2.55
Sequence
CDS
ATGCACCAAGGACATGTGAAATTTCGGACACGATTATGGCTAGTGTTGCCAGTTTTAGTGGCTGTGTTGTTGGAAGTGGTGAGCCTAAGCGGACCCAACGTGTGCATCGTCAAGCAGAAGTACAACATAACAAAACGCGTCAAGTACAGAGCTCCGATGTCAGTGCGGACGTACGTCTGGTGTTTCTCCATGCCCCCGCGTTGCTCCAACTGGACCACCGAGATGAGGGACTTGACCAAGCTTCAGACCGAAGAGAAGACAGCAGAAGTGGCCGTCTGCTGCCAAGGGTACAAGATGAAGGACGGCTCCTGTGTTCCGATCTGCCCTAACGGAAAAACTGGGCCAGGTTGTTCAGAGGATTGTCTGTCAAACAAATGGGGCCCGAATTGTGTGAACGATTGTGAGCCCTGCGACCACGGGACCTGTTCTCCTGTAGACGGCACGTGCCGTTGCGAAGACGGATGGCAAGGTGAGAGTTGCGAGCTGAGCATGCCAACTACAACGCCAGCCACAGTAAGCAAACTAACAAAGAAACCCACAACTAAAATTCCTGCTCGAATTAATACCACGCCTGCCACTGCGATAGTTAAACTTTCCACTGAAACTCCCTCGGCCGTTTCTCAAAGGACTACTGCCGGAACAATTGGGTATACAACAAAAACTTCGACTACACCCCCTCTCAACGCCACCACTGAAAGGATGAGCGAAGAATTTTCTAGAAACACTCCAGTCGCTACAACCGGTATGTCCGCCACGAAGAAACTAACAAATAGTGCTATTGAAACTCTAACGAAAATTGCTTCGACCACTTATAAGACCGTTGACTTCGAGGACACTATAATAGAAAATACTACGGAAAGAACTGAGATACAAACTACGAACGCGACCAGCAATGAAATCTACACAACCGAATCTTCAATTAACAAAGGAAGCAACATTAACTCTAATCAAAATATAAACAGACAAATGGAAAATAGACAGCGACCTACCACTTCTGTCACCACGGAGTCTACAACAGACATGACTGTAATAGCCACAAAGATTATAAGTGAAAATTCTACTGCCACTCTTCGTTTAAATGCTACGACAGAAATGGGAGTCACAGATATTACTAGTGAAGAACAAAAAACTTTACAAACAACCACTGAGCCAATTAAGATGACAACGAAAAGCCAAAGCGCTTTTCGGACCGAAACAAATAATGATCTATCATCAAATTCGACTAGTTTGAACAATATTACAAATATAACTACAACAAAAATTCTAAGCGAATTACCTAAAAAACCAGAATCTACCACGCGGCTAACAACTACCAATTTTAAACCCAAAGAAATATGGATAAAGCCGGCGCAAAAAGAGCCTGAACACATAACAGCTGTGATGGGAGACAAAGAAATGGGAAGGTCTTCCGTGGACTTAACGTCGGTAGTCAGCATAGCGGTTGGTATAATGATAGTTATAATCACAGTAGCCGTTGTTATTGTAATGATTGAGAGATGCAAAAGACCACGATATGACGAAGTCAGGAAGACGGATGATAGAATGCAAGATATTCCACATAATGATGATGCACCGCCACCTTATGTGAGGAGTATTTTCCATTCGCCATTGCCAGAATTACCTTCAACGGGACTGTCGTGTCACTACCAACCGATCTCAACTTTGGATCGTAACTTGAAACAGTTCATGAGACCGGTCGTAGTTCAATCGATTTCGCCAATTATGCTCGAAAACTTTAGAGATATTTTGGAATGTCACTACGACCATTTGCCTAGGAGGAGTCACAATTTATCGATAGATGGACGCTGCTCACTAGCGCCATCTATGACGTGTTGCACTGAACTACGTACACATTGCATGACCGACGAAACAATTATTGAATCTTTAAAAAGAGAAGCAAGACTTGACATTATCGATAACACGACATCAGAACCGCTGTACGCCGAGATCCCTTGCTGGAGACCCCCGTCAGAACACGCGGTGGAAATATTAAACATGAACGGCGAAGCTGTGACGGAATTATGA
Protein
MHQGHVKFRTRLWLVLPVLVAVLLEVVSLSGPNVCIVKQKYNITKRVKYRAPMSVRTYVWCFSMPPRCSNWTTEMRDLTKLQTEEKTAEVAVCCQGYKMKDGSCVPICPNGKTGPGCSEDCLSNKWGPNCVNDCEPCDHGTCSPVDGTCRCEDGWQGESCELSMPTTTPATVSKLTKKPTTKIPARINTTPATAIVKLSTETPSAVSQRTTAGTIGYTTKTSTTPPLNATTERMSEEFSRNTPVATTGMSATKKLTNSAIETLTKIASTTYKTVDFEDTIIENTTERTEIQTTNATSNEIYTTESSINKGSNINSNQNINRQMENRQRPTTSVTTESTTDMTVIATKIISENSTATLRLNATTEMGVTDITSEEQKTLQTTTEPIKMTTKSQSAFRTETNNDLSSNSTSLNNITNITTTKILSELPKKPESTTRLTTTNFKPKEIWIKPAQKEPEHITAVMGDKEMGRSSVDLTSVVSIAVGIMIVIITVAVVIVMIERCKRPRYDEVRKTDDRMQDIPHNDDAPPPYVRSIFHSPLPELPSTGLSCHYQPISTLDRNLKQFMRPVVVQSISPIMLENFRDILECHYDHLPRRSHNLSIDGRCSLAPSMTCCTELRTHCMTDETIIESLKREARLDIIDNTTSEPLYAEIPCWRPPSEHAVEILNMNGEAVTEL
Summary
Uniprot
ProteinModelPortal
PDB
4K0V
E-value=0.0022943,
Score=99
Ontologies
GO
Topology
SignalP
Position: 1 - 30,
Likelihood: 0.947243
Length:
674
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
43.62764
Exp number, first 60 AAs:
21.06753
Total prob of N-in:
0.79362
POSSIBLE N-term signal
sequence
inside
1 - 11
TMhelix
12 - 34
outside
35 - 472
TMhelix
473 - 495
inside
496 - 674
Population Genetic Test Statistics
Pi
187.544014
Theta
183.844648
Tajima's D
1.540718
CLR
0.293749
CSRT
0.791260436978151
Interpretation
Uncertain
